Defining the diversity of phenotypic respecification using multiple cell lines and reprogramming regimens

Stem Cells and Development

Volumn 22, Issue 19, 2013, Pages 2641-2654

  Alicea, Bradly ^a   Murthy, Shashanka ^a   Keaton, Sarah A ^a   Cobbett, Peter ^a,b   Cibelli, Jose B ^a,c   Suhr, Steven T ^a  

^a MICHIGAN STATE UNIVERSITY   (United States)

^b MICHIGAN STATE UNIVERSITY   (United States)

^c Programa Andaluz de Terapia Celular y Medicina Regenerativa   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ANIMAL CELL; ARTICLE; CELL FUNCTION; CELL LINE; CHILD; FEMALE; FIBROBLAST; HUMAN; HUMAN CELL; HUMAN TISSUE; INDUCED NEURAL CELL; MALE; MOUSE; NERVE CELL; NEWBORN; NONHUMAN; PHENOTYPE; PRESCHOOL CHILD; PRIORITY JOURNAL; SKELETAL MUSCLE;

ANIMALS; CELL DIFFERENTIATION; CELL LINE; ELECTROPHYSIOLOGY; FIBROBLASTS; HUMANS; INDUCED PLURIPOTENT STEM CELLS; MICE; MUSCLE, SKELETAL; NEURONS; PATCH-CLAMP TECHNIQUES; PHENOTYPE; SKIN;

EID: 84884553599     PISSN: 15473287     EISSN: 15578534     Source Type: Journal    
DOI: 10.1089/scd.2013.0040     Document Type: Article

References (44)

1. Campbell KH, J McWhir, WA Ritchie and I Wilmut. (1996). Sheep cloned by nuclear transfer from a cultured cell line. Nature 380:64-66.
2. Cibelli JB, SL Stice, PJ Golueke, JJ Kane, J Jerry, C Blackwell, FA Ponce de Leon and JM Robl. (1998). Cloned transgenic calves produced from nonquiescent fetal fibroblasts. Science 280:1256-1258.
3. Siripattarapravat K, B Pinmee, PJ Venta, CC Chang and JB Cibelli. (2009). Somatic cell nuclear transfer in zebrafish. Nat Methods 6:733-735.
4. Wakayama T, AC Perry, M Zuccotti, KR Johnson and R Yanagimachi. (1998). Full-term development of mice from enucleated oocytes injected with cumulus cell nuclei. Nature 394:369-374.
5. Davis RL, H Weintraub and AB Lassar. (1987). Expression of a single transfected cDNA converts fibroblasts to myoblasts. Cell 51:987-1000.
6. Takahashi K and S Yamanaka. (2006). Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 126:663-676.
7. Vierbuchen T, A Ostermeier, ZP Pang, Y Kokubu, TC Sudhof and M Wernig. (2010). Direct conversion of fibroblasts to functional neurons by defined factors. Nature 463:1035-1041.
8. Ieda M, JD Fu, P Delgado-Olguin, V Vedantham, Y Hayashi, BG Bruneau and D Srivastava. (2010). Direct reprogramming of fibroblasts into functional cardiomyocytes by defined factors. Cell 142:375-386.
9. Huang P, Z He, S Ji, H Sun, D Xiang, C Liu, Y Hu, X Wang and L Hui. (2011). Induction of functional hepatocyte-like cells from mouse fibroblasts by defined factors. Nature 475:386-389.
10. Lattanzi L, G Salvatori, M Coletta, C Sonnino, MG Cusella De Angelis, L Gioglio, CE Murry, R Kelly, et al. (1998). High efficiency myogenic conversion of human fibroblasts by adenoviral vector-mediated MyoD gene transfer. An alternative strategy for ex vivo gene therapy of primary myopathies. J Clin Invest 101:2119-2128.
11. Yoshida Y and S Yamanaka. (2012). Labor pains of new technology: Direct cardiac reprogramming. Circ Res 111:3-4.
12. Song K, YJ Nam, X Luo, X Qi, W Tan, GN Huang, A Acharya, CL Smith, MD Tallquist, et al. (2012). Heart repair by reprogramming non-myocytes with cardiac transcription factors. Nature 485:599-604.
13. Chen JX, M Krane, MA Deutsch, L Wang, M Rav-Acha, S Gregoire, MC Engels, K Rajarajan, R Karra, et al. (2012). Inefficient reprogramming of fibroblasts into cardiomyocytes using Gata4, Mef2c, and Tbx5. Circ Res 111:50-55.
14. Suhr ST, EA Chang, RM Rodriguez, K Wang, PJ Ross, Z Beyhan, S Murthy and JB Cibelli. (2009). Telomere dynamics in human cells reprogrammed to pluripotency. PLoS One 4:e8124.
15. Hamill OP, A Marty, E Neher, B Sakmann and FJ Sigworth. (1981). Improved patch-clamp techniques for high-resolution current recording from cells and cell-free membrane patches. Pflugers Arch 391:85-100.
16. Chang EA, Z Beyhan, MS Yoo, K Siripattarapravat, T Ko, KJ Lookingland, BV Madhukar and JB Cibelli. (2009). Increased cellular turnover in response to fluoxetine in neuronal precursors derived from human embryonic stem cells. Int J Dev Biol 54:707-715.
17. Day K, G Shefer, A Shearer and Z Yablonka-Reuveni. (2010). The depletion of skeletal muscle satellite cells with age is concomitant with reduced capacity of single progenitors to produce reserve progeny. Dev Biol 340:330-343.
18. Day K, G Shefer, JB Richardson, G Enikolopov and Z Yablonka-Reuveni. (2007). Nestin-GFP reporter expression defines the quiescent state of skeletal muscle satellite cells. Dev Biol 304:246-259.
19. Ellis P, BM Fagan, ST Magness, S Hutton, O Taranova, S Hayashi, A McMahon, M Rao and L Pevny. (2004). SOX2, a persistent marker for multipotential neural stem cells derived from embryonic stem cells, the embryo or the adult. Dev Neurosci 26:148-165.
20. D'Amour KA and FH Gage. (2003). Genetic and functional differences between multipotent neural and pluripotent embryonic stem cells. Proc Natl Acad Sci U S A 100 Suppl 1:11866-11872.
21. Vogel W, F Grunebach, CA Messam, L Kanz, W Brugger and HJ Buhring. (2003). Heterogeneity among human bone marrow-derived mesenchymal stem cells and neural progenitor cells. Haematologica 88:126-133.
22. Avilion AA, SK Nicolis, LH Pevny, L Perez, N Vivian and R Lovell-Badge. (2003). Multipotent cell lineages in early mouse development depend on SOX2 function. Genes Dev 17:126-140.
23. Zimmerman L, B Parr, U Lendahl, M Cunningham, R McKay, B Gavin, J Mann, G Vassileva and A McMahon. (1994). Independent regulatory elements in the nestin gene direct transgene expression to neural stem cells or muscle precursors. Neuron 12:11-24.
24. Pfisterer U, A Kirkeby, O Torper, J Wood, J Nelander, A Dufour, A Bjorklund, O Lindvall, J Jakobsson and M Parmar. (2011). Direct conversion of human fibroblasts to dopaminergic neurons. Proc Natl Acad Sci U S A 108: 10343-10348.
25. Pang ZP, N Yang, T Vierbuchen, A Ostermeier, DR Fuentes, TQ Yang, A Citri, V Sebastiano, S Marro, TC Sudhof and M Wernig. (2011). Induction of human neuronal cells by defined transcription factors. Nature 476:220-223.
26. Caiazzo M, MT Dell'anno, E Dvoretskova, D Lazarevic, S Taverna, D Leo, TD Sotnikova, A Menegon, P Roncaglia, et al. (2011). Direct generation of functional dopaminergic neurons from mouse and human fibroblasts. Nature 476: 224-227.
27. Ambasudhan R, M Talantova, R Coleman, X Yuan, S Zhu, SA Lipton and S Ding. (2011). Direct reprogramming of adult human fibroblasts to functional neurons under defined conditions. Cell Stem Cell 9:113-118.
28. Edmondson DG and EN Olson. (1989). A gene with homology to the myc similarity region of MyoD1 is expressed during myogenesis and is sufficient to activate the muscle differentiation program. Genes Dev 3:628-640.
29. Miner JH and B Wold. (1990). Herculin, a fourth member of the MyoD family of myogenic regulatory genes. Proc Natl Acad Sci U S A 87:1089-1093.
30. Braun T, G Buschhausen-Denker, E Bober, E Tannich and HH Arnold. (1989). A novel human muscle factor related to but distinct from MyoD1 induces myogenic conversion in 10T1/2 fibroblasts. EMBO J 8:701-709.
31. Lassar AB, BM Paterson and H Weintraub. (1986). Transfection of a DNA locus that mediates the conversion of 10T1/2 fibroblasts to myoblasts. Cell 47:649-656.
32. Macpherson PC, ST Suhr and D Goldman. (2004). Activitydependent gene regulation in conditionally-immortalized muscle precursor cell lines. J Cell Biochem 91:821-839.
33. Luo J, ST Suhr, EA Chang, K Wang, PJ Ross, LL Nelson, PJ Venta, JG Knott and JB Cibelli. (2011). Generation of leukemia inhibitory factor and basic fibroblast growth factordependent induced pluripotent stem cells from canine adult somatic cells. Stem Cells Dev 20:1669-1678.
34. Esteban MA, J Xu, J Yang, M Peng, D Qin, W Li, Z Jiang, J Chen, K Deng, et al. (2009). Generation of induced pluripotent stem cell lines from Tibetan miniature pig. J Biol Chem 284:17634-17640.
35. Ezashi T, BP Telugu, AP Alexenko, S Sachdev, S Sinha and RM Roberts. (2009). Derivation of induced pluripotent stem cells from pig somatic cells. Proc Natl Acad Sci U S A 106:10993-10998.
36. Liao J, C Cui, S Chen, J Ren, J Chen, Y Gao, H Li, N Jia, L Cheng, H Xiao and L Xiao. (2009). Generation of induced pluripotent stem cell lines from adult rat cells. Cell Stem Cell 4:11-15.
37. Takahashi K, K Tanabe, M Ohnuki, M Narita, T Ichisaka, K Tomoda and S Yamanaka. (2007). Induction of pluripotent stem cells from adult human fibroblasts by defined factors. Cell 131:861-872.
38. Yu J, MA Vodyanik, K Smuga-Otto, J Antosiewicz-Bourget, JL Frane, S Tian, J Nie, GA Jonsdottir, V Ruotti, et al. (2007). Induced pluripotent stem cell lines derived from human somatic cells. Science 318:1917-1920.
39. Yang N, YH Ng, ZP Pang, TC Sudhof and M Wernig. (2011). Induced neuronal cells: How to make and define a neuron. Cell Stem Cell 9:517-525.
40. Son EY, JK Ichida, BJ Wainger, JS Toma, VF Rafuse, CJ Woolf and K Eggan. (2011). Conversion of mouse and human fibroblasts into functional spinal motor neurons. Cell Stem Cell 9:205-218.
41. Sekiya S and A Suzuki. (2011). Direct conversion of mouse fibroblasts to hepatocyte-like cells by defined factors. Nature 475:390-393.
42. Efe JA, S Hilcove, J Kim, H Zhou, K Ouyang, G Wang, J Chen and S Ding. (2011). Conversion of mouse fibroblasts into cardiomyocytes using a direct reprogramming strategy. Nat Cell Biol 13:215-222.
43. Challen GA and MH Little. (2006). A side order of stem cells: The SP phenotype. Stem Cells 24:3-12.
44. Chang HY, JT Chi, S Dudoit, C Bondre, M van de Rijn, D Botstein and PO Brown. (2002). Diversity, topographic differentiation, and positional memory in human fibroblasts. Proc Natl Acad Sci U S A 99:12877-12882. Stroke