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Volumn 11, Issue 3, 2011, Pages 587-597

Mutations in the regulatory network underlie the recent clonal expansion of a dominant subclone of the Mycobacterium tuberculosis Beijing genotype

Author keywords

Beijing W genotype; Mycobacterium tuberculosis; Phylogeny; Single nucleotide polymorphism typing; Whole genome sequencing

Indexed keywords

ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; CLONAL SPECIES; CONTROLLED STUDY; DNA SEQUENCE; GENE CLUSTER; GENE REGULATORY NETWORK; GENETIC IDENTIFICATION; GENOME ANALYSIS; GENOTYPE; INTERMETHOD COMPARISON; MOLECULAR CLONING; MUTATIONAL ANALYSIS; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 79953103136     PISSN: 15671348     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.meegid.2011.01.009     Document Type: Article
Times cited : (33)

References (90)
  • 1
    • 33747403758 scopus 로고    scopus 로고
    • The emergence of Beijing family genotypes of Mycobacterium tuberculosis and low-level protection by bacille Calmette-Guerin (BCG) vaccines: is there a link?
    • Abebe F., Bjune G. The emergence of Beijing family genotypes of Mycobacterium tuberculosis and low-level protection by bacille Calmette-Guerin (BCG) vaccines: is there a link?. Clin. Exp. Immunol. 2006, 145:389-397.
    • (2006) Clin. Exp. Immunol. , vol.145 , pp. 389-397
    • Abebe, F.1    Bjune, G.2
  • 2
    • 33846195782 scopus 로고    scopus 로고
    • Role of large sequence polymorphisms (LSPs) in generating genomic diversity among clinical isolates of Mycobacterium tuberculosis and the utility of LSPs in phylogenetic analysis
    • Alland D., Lacher D.W., Hazbon M.H., Motiwala A.S., Qi W., Fleischmann R.D., Whittam T.S. Role of large sequence polymorphisms (LSPs) in generating genomic diversity among clinical isolates of Mycobacterium tuberculosis and the utility of LSPs in phylogenetic analysis. J. Clin. Microbiol. 2007, 45:39-46.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 39-46
    • Alland, D.1    Lacher, D.W.2    Hazbon, M.H.3    Motiwala, A.S.4    Qi, W.5    Fleischmann, R.D.6    Whittam, T.S.7
  • 5
    • 4444240785 scopus 로고    scopus 로고
    • Silent nucleotide polymorphisms and a phylogeny for Mycobacterium tuberculosis
    • Baker L., Brown T., Maiden M.C., Drobniewski F. Silent nucleotide polymorphisms and a phylogeny for Mycobacterium tuberculosis. Emerg. Infect. Dis. 2004, 10:1568-1577.
    • (2004) Emerg. Infect. Dis. , vol.10 , pp. 1568-1577
    • Baker, L.1    Brown, T.2    Maiden, M.C.3    Drobniewski, F.4
  • 6
    • 0032900678 scopus 로고    scopus 로고
    • Median-joining networks for inferring intraspecific phylogenies
    • Bandelt H.J., Forster P., Rohl A. Median-joining networks for inferring intraspecific phylogenies. Mol. Biol. Evol. 1999, 16:37-48.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 37-48
    • Bandelt, H.J.1    Forster, P.2    Rohl, A.3
  • 7
    • 23244465130 scopus 로고    scopus 로고
    • In vivo phenotypic dominance in mouse mixed infections with Mycobacterium tuberculosis clinical isolates
    • Barczak A.K., Domenech P., Boshoff H.I., Reed M.B., Manca C., Kaplan G., Barry C.E. In vivo phenotypic dominance in mouse mixed infections with Mycobacterium tuberculosis clinical isolates. J. Infect. Dis. 2005, 192:600-606.
    • (2005) J. Infect. Dis. , vol.192 , pp. 600-606
    • Barczak, A.K.1    Domenech, P.2    Boshoff, H.I.3    Reed, M.B.4    Manca, C.5    Kaplan, G.6    Barry, C.E.7
  • 8
    • 0033890783 scopus 로고    scopus 로고
    • Mapping of IS6110 insertion sites in two epidemic strains of Mycobacterium tuberculosis
    • Beggs M.L., Eisenach K.D., Cave M.D. Mapping of IS6110 insertion sites in two epidemic strains of Mycobacterium tuberculosis. J. Clin. Microbiol. 2000, 38:2923-2928.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 2923-2928
    • Beggs, M.L.1    Eisenach, K.D.2    Cave, M.D.3
  • 11
    • 0036147534 scopus 로고    scopus 로고
    • Global dissemination of the Mycobacterium tuberculosis W-Beijing family strains
    • Bifani P.J., Mathema B., Kurepina N.E., Kreiswirth B.N. Global dissemination of the Mycobacterium tuberculosis W-Beijing family strains. Trends Microbiol. 2002, 10:45-52.
    • (2002) Trends Microbiol. , vol.10 , pp. 45-52
    • Bifani, P.J.1    Mathema, B.2    Kurepina, N.E.3    Kreiswirth, B.N.4
  • 14
    • 0028851341 scopus 로고
    • Rapid identification of a point mutation of the Mycobacterium tuberculosis catalase-peroxidase (katG) gene associated with isoniazid resistance
    • Cockerill F.R, Uhl J.R., Temesgen Z., Zhang Y., Stockman L., Roberts G.D., Williams D.L., Kline B.C. Rapid identification of a point mutation of the Mycobacterium tuberculosis catalase-peroxidase (katG) gene associated with isoniazid resistance. J. Infect. Dis. 1995, 171:240-245.
    • (1995) J. Infect. Dis. , vol.171 , pp. 240-245
    • Cockerill, F.R.1    Uhl, J.R.2    Temesgen, Z.3    Zhang, Y.4    Stockman, L.5    Roberts, G.D.6    Williams, D.L.7    Kline, B.C.8
  • 24
    • 0036686907 scopus 로고    scopus 로고
    • Worldwide occurrence of Beijing/W strains of Mycobacterium tuberculosis: a systematic review
    • Glynn J.R., Whiteley J., Bifani P.J., Kremer K., van Soolingen D. Worldwide occurrence of Beijing/W strains of Mycobacterium tuberculosis: a systematic review. Emerg. Infect. Dis. 2002, 8:843-849.
    • (2002) Emerg. Infect. Dis. , vol.8 , pp. 843-849
    • Glynn, J.R.1    Whiteley, J.2    Bifani, P.J.3    Kremer, K.4    van Soolingen, D.5
  • 25
    • 33646591556 scopus 로고    scopus 로고
    • Beijing/W Genotype Mycobacterium tuberculosis and drug resistance. European concerted action on new generation genetic markers and techniques for the epidemiology and control of tuberculosis
    • Glynn J.R., Kremer K., Borgdorff M.W., Mar P.R., van Soolingen D. Beijing/W Genotype Mycobacterium tuberculosis and drug resistance. European concerted action on new generation genetic markers and techniques for the epidemiology and control of tuberculosis. Emerg. Infect. Dis. 2006, 12:736-743.
    • (2006) Emerg. Infect. Dis. , vol.12 , pp. 736-743
    • Glynn, J.R.1    Kremer, K.2    Borgdorff, M.W.3    Mar, P.R.4    van Soolingen, D.5
  • 26
    • 0037083489 scopus 로고    scopus 로고
    • Cell-mediated immunity induced by recombinant Mycobacterium bovis Bacille Calmette-Guerin strains against an intracellular bacterial pathogen: importance of antigen secretion or membrane-targeted antigen display as lipoprotein for vaccine efficacy
    • Grode L., Kursar M., Fensterle J., Kaufmann S.H., Hess J. Cell-mediated immunity induced by recombinant Mycobacterium bovis Bacille Calmette-Guerin strains against an intracellular bacterial pathogen: importance of antigen secretion or membrane-targeted antigen display as lipoprotein for vaccine efficacy. J. Immunol. 2002, 168:1869-1876.
    • (2002) J. Immunol. , vol.168 , pp. 1869-1876
    • Grode, L.1    Kursar, M.2    Fensterle, J.3    Kaufmann, S.H.4    Hess, J.5
  • 27
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 2003, 52:696-704.
    • (2003) Syst. Biol. , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 31
    • 0030994680 scopus 로고    scopus 로고
    • Multidrug resistance in Mycobacterium tuberculosis
    • Heym B., Cole S.T. Multidrug resistance in Mycobacterium tuberculosis. Int. J. Antimicrob. Agents 1997, 8:61-70.
    • (1997) Int. J. Antimicrob. Agents , vol.8 , pp. 61-70
    • Heym, B.1    Cole, S.T.2
  • 33
    • 54049099613 scopus 로고    scopus 로고
    • Population structure analysis of the Mycobacterium tuberculosis Beijing family indicates an association between certain sublineages and multidrug resistance
    • Iwamoto T., Yoshida S., Suzuki K., Wada T. Population structure analysis of the Mycobacterium tuberculosis Beijing family indicates an association between certain sublineages and multidrug resistance. Antimicrob. Agents Chemother. 2008, 52:3805-3809.
    • (2008) Antimicrob. Agents Chemother. , vol.52 , pp. 3805-3809
    • Iwamoto, T.1    Yoshida, S.2    Suzuki, K.3    Wada, T.4
  • 37
    • 69049104258 scopus 로고    scopus 로고
    • From Corynebacterium glutamicum to Mycobacterium tuberculosis - towards transfers of gene regulatory networks and integrated data analyses with MycoRegNet
    • Krawczyk J., Kohl T.A., Goesmann A., Kalinowski J., Baumbach J. From Corynebacterium glutamicum to Mycobacterium tuberculosis - towards transfers of gene regulatory networks and integrated data analyses with MycoRegNet. Nucleic Acids Res. 2009, 37:e97.
    • (2009) Nucleic Acids Res. , vol.37
    • Krawczyk, J.1    Kohl, T.A.2    Goesmann, A.3    Kalinowski, J.4    Baumbach, J.5
  • 42
    • 0013566450 scopus 로고    scopus 로고
    • Characterization of the phylogenetic distribution and chromosomal insertion sites of five IS6110 elements in Mycobacterium tuberculosis: non-random integration in the dnaA-dnaN region
    • Kurepina N.E., Sreevatsan S., Plikaytis B.B., Bifani P.J., Connell N.D., Donnelly R.J., van Sooligen D., Musser J.M., Kreiswirth B.N. Characterization of the phylogenetic distribution and chromosomal insertion sites of five IS6110 elements in Mycobacterium tuberculosis: non-random integration in the dnaA-dnaN region. Tuber. Lung Dis. 1998, 79:31-42.
    • (1998) Tuber. Lung Dis. , vol.79 , pp. 31-42
    • Kurepina, N.E.1    Sreevatsan, S.2    Plikaytis, B.B.3    Bifani, P.J.4    Connell, N.D.5    Donnelly, R.J.6    van Sooligen, D.7    Musser, J.M.8    Kreiswirth, B.N.9
  • 43
    • 33646242255 scopus 로고    scopus 로고
    • Mutations in mutT genes of Mycobacterium tuberculosis isolates of Beijing genotype
    • Lari N., Rindi L., Bonanni D., Tortoli E., Garzelli C. Mutations in mutT genes of Mycobacterium tuberculosis isolates of Beijing genotype. J. Med. Microbiol. 2006, 55:599-603.
    • (2006) J. Med. Microbiol. , vol.55 , pp. 599-603
    • Lari, N.1    Rindi, L.2    Bonanni, D.3    Tortoli, E.4    Garzelli, C.5
  • 44
    • 0034023994 scopus 로고    scopus 로고
    • Exclusive mutations related to isoniazid and ethionamide resistance among Mycobacterium tuberculosis isolates from Korea
    • Lee H., Cho S.N., Bang H.E., Lee J.H., Bai G.H., Kim S.J., Kim J.D. Exclusive mutations related to isoniazid and ethionamide resistance among Mycobacterium tuberculosis isolates from Korea. Int. J. Tuberc. Lung Dis. 2000, 4:441-447.
    • (2000) Int. J. Tuberc. Lung Dis. , vol.4 , pp. 441-447
    • Lee, H.1    Cho, S.N.2    Bang, H.E.3    Lee, J.H.4    Bai, G.H.5    Kim, S.J.6    Kim, J.D.7
  • 46
    • 0036839651 scopus 로고    scopus 로고
    • Differences in rate and variability of intracellular growth of a panel of Mycobacterium tuberculosis clinical isolates within a human monocyte model
    • Li Q., Whalen C.C., Albert J.M., Larkin R., Zukowski L., Cave M.D., Silver R.F. Differences in rate and variability of intracellular growth of a panel of Mycobacterium tuberculosis clinical isolates within a human monocyte model. Infect. Immun. 2002, 70:6489-6493.
    • (2002) Infect. Immun. , vol.70 , pp. 6489-6493
    • Li, Q.1    Whalen, C.C.2    Albert, J.M.3    Larkin, R.4    Zukowski, L.5    Cave, M.D.6    Silver, R.F.7
  • 49
    • 70350499473 scopus 로고    scopus 로고
    • Evidence for a rapid rate of molecular evolution at the hypervariable and immunogenic Mycobacterium tuberculosis PPE38 gene region
    • McEvoy C.R., van Helden P.D., Warren R.M., Gey van Pittius N.C. Evidence for a rapid rate of molecular evolution at the hypervariable and immunogenic Mycobacterium tuberculosis PPE38 gene region. BMC Evol. Biol. 2009, 9:237.
    • (2009) BMC Evol. Biol. , vol.9 , pp. 237
    • McEvoy, C.R.1    van Helden, P.D.2    Warren, R.M.3    Gey van Pittius, N.C.4
  • 50
    • 0036221099 scopus 로고    scopus 로고
    • Molecular characterization of multiple-drug-resistant Mycobacterium tuberculosis isolates from northwestern Russia and analysis of rifampin resistance using RNA/RNA mismatch analysis as compared to the line probe assay and sequencing of the rpoB gene
    • Mokrousov I., Filliol I., Legrand E., Sola C., Otten T., Vyshnevskaya E., Limeschenko E., Vyshnevskiy B., Narvskaya O., Rastogi N. Molecular characterization of multiple-drug-resistant Mycobacterium tuberculosis isolates from northwestern Russia and analysis of rifampin resistance using RNA/RNA mismatch analysis as compared to the line probe assay and sequencing of the rpoB gene. Res. Microbiol. 2002, 153:213-219.
    • (2002) Res. Microbiol. , vol.153 , pp. 213-219
    • Mokrousov, I.1    Filliol, I.2    Legrand, E.3    Sola, C.4    Otten, T.5    Vyshnevskaya, E.6    Limeschenko, E.7    Vyshnevskiy, B.8    Narvskaya, O.9    Rastogi, N.10
  • 54
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M., Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 1986, 3:418-426.
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 56
    • 33846067980 scopus 로고    scopus 로고
    • SwissRegulon: a database of genome-wide annotations of regulatory sites
    • Pachkov M., Erb I., Molina N., van Nimwegen E. SwissRegulon: a database of genome-wide annotations of regulatory sites. Nucleic Acids Res. 2007, 35:D127-131.
    • (2007) Nucleic Acids Res. , vol.35
    • Pachkov, M.1    Erb, I.2    Molina, N.3    van Nimwegen, E.4
  • 57
    • 74549118978 scopus 로고    scopus 로고
    • Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains
    • Parwati I., van Crevel R., van Soolingen D. Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains. Lancet Infect Dis. 2010, 10:103-111.
    • (2010) Lancet Infect Dis. , vol.10 , pp. 103-111
    • Parwati, I.1    van Crevel, R.2    van Soolingen, D.3
  • 58
    • 67651149484 scopus 로고    scopus 로고
    • Phylogenetic understanding of clonal populations in an era of whole genome sequencing
    • Pearson T., Okinaka R.T., Foster J.T., Keim P. Phylogenetic understanding of clonal populations in an era of whole genome sequencing. Infect. Genet. Evol. 2009, 9:1010-1019.
    • (2009) Infect. Genet. Evol. , vol.9 , pp. 1010-1019
    • Pearson, T.1    Okinaka, R.T.2    Foster, J.T.3    Keim, P.4
  • 59
    • 67650601963 scopus 로고    scopus 로고
    • Evolution of transcriptional regulatory circuits in bacteria
    • Perez J.C., Groisman E.A. Evolution of transcriptional regulatory circuits in bacteria. Cell 2009, 138:233-244.
    • (2009) Cell , vol.138 , pp. 233-244
    • Perez, J.C.1    Groisman, E.A.2
  • 61
    • 70349668297 scopus 로고    scopus 로고
    • Genomic diversity and evolution of Mycobacterium ulcerans revealed by next-generation sequencing
    • Qi W., Kaser M., Roltgen K., Yeboah-Manu D., Pluschke G. Genomic diversity and evolution of Mycobacterium ulcerans revealed by next-generation sequencing. PLoS Pathog. 2009, 5:e1000580.
    • (2009) PLoS Pathog. , vol.5
    • Qi, W.1    Kaser, M.2    Roltgen, K.3    Yeboah-Manu, D.4    Pluschke, G.5
  • 62
    • 0038724818 scopus 로고    scopus 로고
    • Mutations in putative mutator genes of Mycobacterium tuberculosis strains of the W-Beijing family
    • Rad M.E., Bifani P., Martin C., Kremer K., Samper S., Rauzier J., et al. Mutations in putative mutator genes of Mycobacterium tuberculosis strains of the W-Beijing family. Emerg. Infect. Dis. 2003, 44:838-845.
    • (2003) Emerg. Infect. Dis. , vol.44 , pp. 838-845
    • Rad, M.E.1    Bifani, P.2    Martin, C.3    Kremer, K.4    Samper, S.5    Rauzier, J.6
  • 63
    • 34147167504 scopus 로고    scopus 로고
    • The W-Beijing lineage of Mycobacterium tuberculosis overproduces triglycerides and has the DosR dormancy regulon constitutively upregulated
    • 3rd
    • Reed M.B., Gagneux S., Deriemer K., Small P.M., Barry C.E., 3rd The W-Beijing lineage of Mycobacterium tuberculosis overproduces triglycerides and has the DosR dormancy regulon constitutively upregulated. J. Bacteriol. 2007, 189:2583-2589.
    • (2007) J. Bacteriol. , vol.189 , pp. 2583-2589
    • Reed, M.B.1    Gagneux, S.2    Deriemer, K.3    Small, P.M.4    Barry, C.E.5
  • 64
    • 0010459544 scopus 로고    scopus 로고
    • Dynamics of bacterial colonisation in the respiratory tract of patients with cystic fibrosis
    • Renders N., Verbrugh H., Van Belkum A. Dynamics of bacterial colonisation in the respiratory tract of patients with cystic fibrosis. Infect. Genet. Evol. 2001, 1:29-39.
    • (2001) Infect. Genet. Evol. , vol.1 , pp. 29-39
    • Renders, N.1    Verbrugh, H.2    Van Belkum, A.3
  • 65
    • 57549098790 scopus 로고    scopus 로고
    • Evolutionary pathway of the Beijing lineage of Mycobacterium tuberculosis based on genomic deletions and mutT genes polymorphisms
    • Rindi L., Lari N., Cuccu B., Garzelli C. Evolutionary pathway of the Beijing lineage of Mycobacterium tuberculosis based on genomic deletions and mutT genes polymorphisms. Infect. Genet. Evol. 2009, 9:48-53.
    • (2009) Infect. Genet. Evol. , vol.9 , pp. 48-53
    • Rindi, L.1    Lari, N.2    Cuccu, B.3    Garzelli, C.4
  • 68
    • 33646179775 scopus 로고    scopus 로고
    • Functional insights from the molecular modelling of a novel two-component system
    • Shrivastava R., Das D.R., Wiker H.G., Das A.K. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006, 344:1327-1333.
    • (2006) Biochem. Biophys. Res. Commun. , vol.344 , pp. 1327-1333
    • Shrivastava, R.1    Das, D.R.2    Wiker, H.G.3    Das, A.K.4
  • 69
    • 64049089283 scopus 로고    scopus 로고
    • Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis
    • Shrivastava R., Ghosh A.K., Das A.K. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology 2009, 155:772-779.
    • (2009) Microbiology , vol.155 , pp. 772-779
    • Shrivastava, R.1    Ghosh, A.K.2    Das, A.K.3
  • 71
  • 74
    • 43149116352 scopus 로고    scopus 로고
    • Interdomain interaction reconstitutes the functionality of PknA, a eukaryotic type Ser/Thr kinase from Mycobacterium tuberculosis
    • Thakur M., Chaba R., Mondal A.K., Chakraborti P.K. Interdomain interaction reconstitutes the functionality of PknA, a eukaryotic type Ser/Thr kinase from Mycobacterium tuberculosis. J. Biol. Chem. 2008, 283:8023-8033.
    • (2008) J. Biol. Chem. , vol.283 , pp. 8023-8033
    • Thakur, M.1    Chaba, R.2    Mondal, A.K.3    Chakraborti, P.K.4
  • 75
    • 53149116291 scopus 로고    scopus 로고
    • Ability of PknA, a mycobacterial eukaryotic-type serine/threonine kinase, to transphosphorylate MurD, a ligase involved in the process of peptidoglycan biosynthesis
    • Thakur M., Chakraborti P.K. Ability of PknA, a mycobacterial eukaryotic-type serine/threonine kinase, to transphosphorylate MurD, a ligase involved in the process of peptidoglycan biosynthesis. Biochem. J. 2008, 415:27-33.
    • (2008) Biochem. J. , vol.415 , pp. 27-33
    • Thakur, M.1    Chakraborti, P.K.2
  • 76
    • 35349031788 scopus 로고    scopus 로고
    • Beijing family Mycobacterium tuberculosis strains differ in their intracellular growth in THP-1 macrophages
    • Theus S., Eisenach K., Fomukong N., Silver R.F., Cave M.D. Beijing family Mycobacterium tuberculosis strains differ in their intracellular growth in THP-1 macrophages. Int. J. Tuberc. Lung Dis. 2007, 11:1087-1093.
    • (2007) Int. J. Tuberc. Lung Dis. , vol.11 , pp. 1087-1093
    • Theus, S.1    Eisenach, K.2    Fomukong, N.3    Silver, R.F.4    Cave, M.D.5
  • 81
    • 0033711560 scopus 로고    scopus 로고
    • Mutations at amino acid position 315 of the katG gene are associated with high-level resistance to isoniazid, other drug resistance, and successful transmission of Mycobacterium tuberculosis in the Netherlands
    • van Soolingen D., de Haas P.E., van Doorn H.R., Kuijper E., Rinder H., Borgdorff M.W. Mutations at amino acid position 315 of the katG gene are associated with high-level resistance to isoniazid, other drug resistance, and successful transmission of Mycobacterium tuberculosis in the Netherlands. J. Infect. Dis. 2000, 182:1788-1790.
    • (2000) J. Infect. Dis. , vol.182 , pp. 1788-1790
    • van Soolingen, D.1    de Haas, P.E.2    van Doorn, H.R.3    Kuijper, E.4    Rinder, H.5    Borgdorff, M.W.6
  • 82
    • 0037850685 scopus 로고    scopus 로고
    • Restriction fragment length polymorphism typing of mycobacteria
    • Humana Press Inc., Totowa, NJ, T. Parish, N.G. Stoker (Eds.)
    • van Soolingen D., De Haas P., Kremer K. Restriction fragment length polymorphism typing of mycobacteria. Mycobacterium tuberculosis Protocols 2001, 165-203. Humana Press Inc., Totowa, NJ. T. Parish, N.G. Stoker (Eds.).
    • (2001) Mycobacterium tuberculosis Protocols , pp. 165-203
    • van Soolingen, D.1    De Haas, P.2    Kremer, K.3
  • 83
    • 78049484011 scopus 로고    scopus 로고
    • Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfaces
    • Venselaar H., Te Beek T.A., Kuipers R.K., Hekkelman M.L., Vriend G. Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfaces. BMC Bioinformatics 2010, 11:548.
    • (2010) BMC Bioinformatics , vol.11 , pp. 548
    • Venselaar, H.1    Te Beek, T.A.2    Kuipers, R.K.3    Hekkelman, M.L.4    Vriend, G.5
  • 85
    • 67651119821 scopus 로고    scopus 로고
    • Allelic diversity of variable number of tandem repeats provides phylogenetic clues regarding the Mycobacterium tuberculosis Beijing family
    • Wada T., Iwamoto T. Allelic diversity of variable number of tandem repeats provides phylogenetic clues regarding the Mycobacterium tuberculosis Beijing family. Infect. Genet. Evol. 2009, 9:921-926.
    • (2009) Infect. Genet. Evol. , vol.9 , pp. 921-926
    • Wada, T.1    Iwamoto, T.2
  • 86
    • 58149314011 scopus 로고    scopus 로고
    • Genetic diversity of the Mycobacterium tuberculosis Beijing family in East Asia revealed through refined population structure analysis
    • Wada T., Iwamoto T., Maeda S. Genetic diversity of the Mycobacterium tuberculosis Beijing family in East Asia revealed through refined population structure analysis. FEMS Microbiol. Lett. 2009, 291:35-43.
    • (2009) FEMS Microbiol. Lett. , vol.291 , pp. 35-43
    • Wada, T.1    Iwamoto, T.2    Maeda, S.3
  • 87
    • 65649115454 scopus 로고    scopus 로고
    • Activation of the eis gene in a W-Beijing strain of Mycobacterium tuberculosis correlates with increased SigA levels and enhanced intracellular growth
    • Wu S., Barnes P.F., Samten B., Pang X., Rodrigue S., Ghanny S., Soteropoulos P., Gaudreau L., Howard S.T. Activation of the eis gene in a W-Beijing strain of Mycobacterium tuberculosis correlates with increased SigA levels and enhanced intracellular growth. Microbiology 2009, 155:1272-1281.
    • (2009) Microbiology , vol.155 , pp. 1272-1281
    • Wu, S.1    Barnes, P.F.2    Samten, B.3    Pang, X.4    Rodrigue, S.5    Ghanny, S.6    Soteropoulos, P.7    Gaudreau, L.8    Howard, S.T.9
  • 89
    • 34248669040 scopus 로고    scopus 로고
    • KaKs_Calculator: calculating Ka and Ks through model selection and model averaging
    • Zhang Z., Li J., Zhao X.Q., Wang J., Wong G.K., Yu J. KaKs_Calculator: calculating Ka and Ks through model selection and model averaging. Genom. Proteom. Bioinform. 2006, 4:259-263.
    • (2006) Genom. Proteom. Bioinform. , vol.4 , pp. 259-263
    • Zhang, Z.1    Li, J.2    Zhao, X.Q.3    Wang, J.4    Wong, G.K.5    Yu, J.6
  • 90
    • 48649088321 scopus 로고    scopus 로고
    • Genetic basis of virulence attenuation revealed by comparative genomic analysis of Mycobacterium tuberculosis strain H37Ra versus H37Rv
    • Zheng H., Lu L., Wang B., Pu S., Zhang X., Zhu G., Shi W., Zhang L., Wang H., Wang S., Zhao G., Zhang Y. Genetic basis of virulence attenuation revealed by comparative genomic analysis of Mycobacterium tuberculosis strain H37Ra versus H37Rv. PLoS ONE 2008, 3:e2375.
    • (2008) PLoS ONE , vol.3
    • Zheng, H.1    Lu, L.2    Wang, B.3    Pu, S.4    Zhang, X.5    Zhu, G.6    Shi, W.7    Zhang, L.8    Wang, H.9    Wang, S.10    Zhao, G.11    Zhang, Y.12


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