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Volumn 17, Issue 14, 2013, Pages 1923-1931

Integration microarray and regulation datasets for chronic obstructive pulmonary disease

Author keywords

Chronic obstructive pulmonary disease; Gene regulatory networks; Pathway analysis

Indexed keywords

PROTEIN NFKB1; SMAD4 PROTEIN; STAT1 PROTEIN; STAT3 PROTEIN; TRANSCRIPTION FACTOR; TRANSCRIPTOME; UNCLASSIFIED DRUG;

EID: 84884189410     PISSN: 11283602     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (9)

References (38)
  • 1
    • 33845338724 scopus 로고    scopus 로고
    • Projections of global mortality and burden of disease from 2002 to 2030
    • MATHERS CD, LONCAR D. Projections of global mortality and burden of disease from 2002 to 2030. PLoS Med 2006; 3: e442.
    • (2006) PLoS Med , vol.3
    • Mathers, C.D.1    Loncar, D.2
  • 3
    • 0033994635 scopus 로고    scopus 로고
    • Mechanisms in COPD: Differences from asthma
    • BARNES PJ. Mechanisms in COPD: differences from asthma. Chest 2000; 117(2 Suppl: 10S-14S.
    • (2000) Chest , vol.117 , Issue.2 SUPPL.
    • Barnes, P.J.1
  • 4
    • 0035744614 scopus 로고    scopus 로고
    • Cytokines in chronic obstructive pulmonary disease
    • CHUNG K. Cytokines in chronic obstructive pulmonary disease. Eur Respir J 2001; 18(34 suppl: 50s-59s.
    • (2001) Eur Respir J , vol.18 , Issue.34 SUPPL.
    • Chung, K.1
  • 5
    • 27644565844 scopus 로고    scopus 로고
    • Pathogenesis of chronic obstructive pulmonary disease
    • discussion 90-91
    • MACNEE W. Pathogenesis of chronic obstructive pulmonary disease. Proc Am Thorac Soc 2005; 2: 258-266; discussion 90-91.
    • (2005) Proc Am Thorac Soc , vol.2 , pp. 258-266
    • Macnee, W.1
  • 6
    • 4143051640 scopus 로고    scopus 로고
    • Burden and clinical features of chronic obstructive pulmonary disease (COPD)
    • PAUWELS RA, RABE KF. Burden and clinical features of chronic obstructive pulmonary disease (COPD). Lancet 2004; 364(9434): 613-620.
    • (2004) Lancet , vol.364 , Issue.9434 , pp. 613-620
    • Pauwels, R.A.1    Rabe, K.F.2
  • 9
    • 79956118692 scopus 로고    scopus 로고
    • Chronic Obstructive Pulmonary Disease-Specific gene expression signatures of alveolar macrophages as well as peripheral blood monocytes overlap and correlate with lung function
    • POLISKA S, CSANKY E, SZANTO A, SZATMARI I, MESKO B, SZELES L, DEZSO B, SCHOLTZ B, PODANI J, KILTY I, TAKACS L, NAGY L. Chronic Obstructive Pulmonary Disease-Specific gene expression signatures of alveolar macrophages as well as peripheral blood monocytes overlap and correlate with lung function. Respiration 2011; 81: 499-510.
    • (2011) Respiration , vol.81 , pp. 499-510
    • Poliska, S.1    Csanky, E.2    Szanto, A.3    Szatmari, I.4    Mesko, B.5    Szeles, L.6    Dezso, B.7    Scholtz, B.8    Podani, J.9    Kilty, I.10    Takacs, L.11    Nagy, L.12
  • 10
    • 28444448000 scopus 로고    scopus 로고
    • Interactome-transcriptome analysis reveals the high centrality of genes differentially expressed in lung cancer tissues
    • WACHI S, YONEDA K, WU R. Interactome-transcriptome analysis reveals the high centrality of genes differentially expressed in lung cancer tissues. Bioinformatics 2005; 21: 4205-4208.
    • (2005) Bioinformatics , vol.21 , pp. 4205-4208
    • Wachi, S.1    Yoneda, K.2    Wu, R.3
  • 11
    • 0036469065 scopus 로고    scopus 로고
    • Signal transduction and the control of gene expression
    • BRIVANLOU AH, DARNELL JE, JR. Signal transduction and the control of gene expression. Science 2002; 295(5556): 813-818.
    • (2002) Science , vol.295 , Issue.5556 , pp. 813-818
    • Brivanlou, A.H.1    Darnell Jr., J.E.2
  • 12
    • 46049087782 scopus 로고    scopus 로고
    • The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation
    • WINGENDER E. The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation. Brief Bioinform 2008; 9: 326.
    • (2008) Brief Bioinform , vol.9 , pp. 326
    • Wingender, E.1
  • 13
    • 33846107777 scopus 로고    scopus 로고
    • TRED: A transcriptional regulatory element database, new entries and other development
    • Database issue
    • JIANG C, XUAN Z, ZHAO F, ZHANG MQ. TRED: a transcriptional regulatory element database, new entries and other development. Nucleic Acids Res 2007; 35(Database issue: D137-140.
    • (2007) Nucleic Acids Res , vol.35
    • Jiang, C.1    Xuan, Z.2    Zhao, F.3    Zhang, M.Q.4
  • 14
    • 0037805576 scopus 로고    scopus 로고
    • The KEGG database
    • discussion -3, 19-28, 244-252
    • KANEHISA M. The KEGG database. Novartis Found Symp 2002; 247: 91-101; discussion -3, 19-28, 244-252.
    • (2002) Novartis Found Symp , vol.247 , pp. 91-101
    • Kanehisa, M.1
  • 15
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Article3
    • SMYTH GK. Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 2004; 3: Article3.
    • (2004) Stat Appl Genet Mol Biol , vol.3
    • Smyth, G.K.1
  • 16
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • HUANG DA W, SHERMAN BT, LEMPICKI RA. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 2009; 4: 44-57.
    • (2009) Nat Protoc , vol.4 , pp. 44-57
    • Huang, D.A.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 20
    • 77956850355 scopus 로고    scopus 로고
    • Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains
    • LIU ZP, WANG Y, ZHANG XS, CHEN L. Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains. BMC Syst Biol 2010; 4(Suppl): S11
    • (2010) BMC Syst Biol , vol.4 , Issue.SUPPL.
    • Liu, Z.P.1    Wang, Y.2    Zhang, X.S.3    Chen, L.4
  • 22
    • 65649116604 scopus 로고    scopus 로고
    • Dysregulated apoptosis and NFkappaB expression in COPD subjects
    • BROWN V, ELBORN JS, BRADLEY J, ENNIS M. Dysregulated apoptosis and NFkappaB expression in COPD subjects. Respir Res 2009; 10: 24.
    • (2009) Respir Res , vol.10 , pp. 24
    • Brown, V.1    Elborn, J.S.2    Bradley, J.3    Ennis, M.4
  • 23
    • 41049087252 scopus 로고    scopus 로고
    • Downregulation of secretory leukocyte proteinase inhibitor in chronic obstructive lung disease: The role of TGF-beta/Smads signaling pathways
    • LUO BL, NIU RC, FENG JT, HU CP, XIE XY, MA LJ. Downregulation of secretory leukocyte proteinase inhibitor in chronic obstructive lung disease: the role of TGF-beta/Smads signaling pathways. Arch Med Res 2008; 39: 388-396.
    • (2008) Arch Med Res , vol.39 , pp. 388-396
    • Luo, B.L.1    Niu, R.C.2    Feng, J.T.3    Cp, H.U.4    Xie, X.Y.5    Ma, L.J.6
  • 24
    • 77955855357 scopus 로고    scopus 로고
    • Expression of secretory leukocyte proteinase inhibitor in the bronchi and lung tissues of chronic obstructive pulmonary disease rat models and the regulatory mechanism by transforming growth factor beta(1)
    • NIU RC, LUO BL, FENG JT, WANG LJ, HU CP. Expression of secretory leukocyte proteinase inhibitor in the bronchi and lung tissues of chronic obstructive pulmonary disease rat models and the regulatory mechanism by transforming growth factor beta(1). Zhonghua Jie He He Hu Xi Za Zhi 2007; 30: 851-856.
    • (2007) Zhonghua Jie He He Hu Xi Za Zhi , vol.30 , pp. 851-856
    • Niu, R.C.1    Luo, B.L.2    Feng, J.T.3    Wang, L.J.4    Cp, H.U.5
  • 25
    • 59249107914 scopus 로고    scopus 로고
    • Stat3 downstream genes serve as biomarkers in human lung carcinomas and chronic obstructive pulmonary disease
    • QU P, ROBERTS J, LI Y, ALBRECHT M, CUMMINGS OW, EBLE JN, DU H, YAN C. Stat3 downstream genes serve as biomarkers in human lung carcinomas and chronic obstructive pulmonary disease. Lung Cancer 2009; 63: 341-347.
    • (2009) Lung Cancer , vol.63 , pp. 341-347
    • Qu, P.1    Roberts, J.2    Li, Y.3    Albrecht, M.4    Cummings, O.W.5    Eble, J.N.6    Du, H.7    Yan, C.8
  • 27
    • 66149093072 scopus 로고    scopus 로고
    • The pathology of chronic obstructive pulmonary disease
    • HOGG JC, TIMENS W. The pathology of chronic obstructive pulmonary disease. Annu Rev Pathol 2009; 4: 435-459.
    • (2009) Annu Rev Pathol , vol.4 , pp. 435-459
    • Hogg, J.C.1    Timens, W.2
  • 30
    • 35148812255 scopus 로고    scopus 로고
    • COPD in cancer patients: Higher prevalence in the elderly, a different treatment strategy in case of primary tumours above the diaphragm, and a worse overall survival in the elderly patient
    • VAN DE SCHANS SA, JANSSEN-HEIJNEN ML, BIESMA B, SMEENK FW, VAN DE POLL-FRANSE LV, SEYNAEVE C, COEBERGH JW. COPD in cancer patients: higher prevalence in the elderly, a different treatment strategy in case of primary tumours above the diaphragm, and a worse overall survival in the elderly patient. Eur J Cancer 2007; 43: 2194-2202.
    • (2007) Eur J Cancer , vol.43 , pp. 2194-2202
    • Van De Schans, S.A.1    Janssen-Heijnen, M.L.2    Biesma, B.3    Smeenk, F.W.4    Van De Poll-Franse, L.V.5    Seynaeve, C.6    Coebergh, J.W.7
  • 31
    • 68849111316 scopus 로고    scopus 로고
    • Current concepts on the role of inflammation in COPD and lung cancer
    • YAO H, RAHMAN I. Current concepts on the role of inflammation in COPD and lung cancer. Curr Opin Pharmacol 2009; 9: 375-383.
    • (2009) Curr Opin Pharmacol , vol.9 , pp. 375-383
    • Yao, H.1    Rahman, I.2
  • 34
    • 41949118067 scopus 로고    scopus 로고
    • Killer cells in chronic obstructive pulmonary disease
    • FAIRCLOUGH L, URBANOWICZ R, CORNE J, LAMB J. Killer cells in chronic obstructive pulmonary disease. Clin Sci 2008; 114: 533-541.
    • (2008) Clin Sci , vol.114 , pp. 533-541
    • Fairclough, L.1    Urbanowicz, R.2    Corne, J.3    Lamb, J.4
  • 36
    • 36249014327 scopus 로고    scopus 로고
    • Functional significance of apoptosis in chronic obstructive pulmonary disease
    • PARK JW, RYTER SW, CHOI AMK. Functional significance of apoptosis in chronic obstructive pulmonary disease. COPD: J Chron Obstruct Pulmon Dis 2007; 4: 347-353.
    • (2007) COPD: J Chron Obstruct Pulmon Dis , vol.4 , pp. 347-353
    • Park, J.W.1    Ryter, S.W.2    Amk, C.3
  • 37
    • 33744821605 scopus 로고    scopus 로고
    • Chemokine receptors in chronic obstructive pulmonary disease (COPD)
    • PANINA P, MARIANI M, DAMBROSIO D. Chemokine receptors in chronic obstructive pulmonary disease (COPD). Curr Drug Targets 2006; 7: 669-674.
    • (2006) Curr Drug Targets , vol.7 , pp. 669-674
    • Panina, P.1    Mariani, M.2    Dambrosio, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.