-
1
-
-
12744261466
-
Computational prediction of miRNAs in Arabidopsis thaliana
-
Adai A. et al. (2005) Computational prediction of miRNAs in Arabidopsis thaliana. Genome Res. 15: 78-91.
-
(2005)
Genome Res
, vol.15
, pp. 78-91
-
-
Adai, A.1
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A New Generation of Protein Database Search Programs
-
Altschul S.F., Madden T.L., Schäffer A.A., J. Zhang, Zhang Z., Miller W., Lipman D.J. (1997) Gapped BLAST and PSI-BLAST: A New Generation of Protein Database Search Programs, Nucl. Acids Res. 25: 3389-3402.
-
(1997)
Nucl. Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
22144457368
-
Antiquity of microRNAs and their targets in land plants
-
Axtell M.J., Bartel D.P. (2005) Antiquity of microRNAs and their targets in land plants. Plant Cell 17: 1658-1673.
-
(2005)
Plant Cell
, vol.17
, pp. 1658-1673
-
-
Axtell, M.J.1
Bartel, D.P.2
-
4
-
-
85047686582
-
Learning from the Arabidopsis ex-perience. The next gene search paradigm
-
Bressan R.A., Zhang C., Zhang H., Hasegawa P.M., Bohnert H.J., Zhu J.K. (2001) Learning from the Arabidopsis ex-perience. The next gene search paradigm. Plant Physiol. 127: 1354-1360.
-
(2001)
Plant Physiol
, vol.127
, pp. 1354-1360
-
-
Bressan, R.A.1
Zhang, C.2
Zhang, H.3
Hasegawa, P.M.4
Bohnert, H.J.5
Zhu, J.K.6
-
5
-
-
0038299558
-
Role of microRNAs in plant and animal development
-
Carrington J.C., Ambros V. (2003) Role of microRNAs in plant and animal development. Science 301: 336-338.
-
(2003)
Science
, vol.301
, pp. 336-338
-
-
Carrington, J.C.1
Ambros, V.2
-
6
-
-
1642366133
-
A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development
-
Chen X. (2004) A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development. Science 303: 2022-2025.
-
(2004)
Science
, vol.303
, pp. 2022-2025
-
-
Chen, X.1
-
7
-
-
84865443130
-
Computational Identification of Conserved microRNAs and Their Targets in Tea(Camellia sinensis)
-
Das A., Mondal T.K. (2010) Computational Identification of Conserved microRNAs and Their Targets in Tea(Camellia sinensis). Amer. J. Plant Sci. 1: 77-86.
-
(2010)
Amer. J. Plant Sci
, vol.1
, pp. 77-86
-
-
Das, A.1
Mondal, T.K.2
-
8
-
-
33749059160
-
miRBase: The microRNA sequence database
-
Griffiths-Jones S. (2006) miRBase: the microRNA sequence database. Meth. Mol. Biol. 342: 129-138.
-
(2006)
Meth. Mol. Biol
, vol.342
, pp. 129-138
-
-
Griffiths-Jones, S.1
-
9
-
-
24944510549
-
MicroRNA Di-rects mRNA Cleavage of the Transcription Factor NAC1 to Downregulate Auxin Signals for Arabidopsis Lateral Root Development
-
Guo S.H., Xie Q., Fei F.J., Chua H.N. (2005) MicroRNA Di-rects mRNA Cleavage of the Transcription Factor NAC1 to Downregulate Auxin Signals for Arabidopsis Lateral Root Development. Plant Cell 17: 1376-1386.
-
(2005)
Plant Cell
, vol.17
, pp. 1376-1386
-
-
Guo, S.H.1
Xie, Q.2
Fei, F.J.3
Chua, H.N.4
-
10
-
-
43449107651
-
Identification and Verification of microRNA in Wheat (Triticum aestivum)
-
Jin W., Li N., Zhang B., Wu F., Li W., Guo A., Deng Z. (2008) Identification and Verification of microRNA in Wheat (Triticum aestivum). J. Plant Res. 121: 351-355.
-
(2008)
J. Plant Res
, vol.121
, pp. 351-355
-
-
Jin, W.1
Li, N.2
Zhang, B.3
Wu, F.4
Li, W.5
Guo, A.6
Deng, Z.7
-
11
-
-
2942672580
-
Computtional Iden-tification of Plant microRNAs and Their Targets, Inclu-ding a Stress-Induced miRNA
-
Jones-Rhoades M.W., Bartel P.D. (2004) Computtional Iden-tification of Plant microRNAs and Their Targets, Inclu-ding a Stress-Induced miRNA. Mol. Cell 14: 787-799.
-
(2004)
Mol. Cell
, vol.14
, pp. 787-799
-
-
Jones-Rhoades, M.W.1
Bartel, P.D.2
-
12
-
-
4344637081
-
Arabidopsis micro-RNA bio-genesis through Dicer-like 1 protein functions
-
Kurihara Y., Watanabe Y., (2004) Arabidopsis micro-RNA bio-genesis through Dicer-like 1 protein functions. Proc. Natl. Acad. Sci. USA 101: 12753-12758.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 12753-12758
-
-
Kurihara, Y.1
Watanabe, Y.2
-
14
-
-
0027751663
-
The C. elegans he-terochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
-
Lee R.C., Einbaum R.L., Ambros V. (1993) The C. elegans he-terochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75: 843-854.
-
(1993)
Cell
, vol.75
, pp. 843-854
-
-
Lee, R.C.1
Einbaum, R.L.2
Ambros, V.3
-
15
-
-
18844373063
-
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
-
Li Y., Li W., Jin Y.X. (2005) Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa. Acta Biochim. Biophys. Sin. (Shanghai) 37: 75-87.
-
(2005)
Acta Biochim. Biophys. Sin. (Shanghai)
, vol.37
, pp. 75-87
-
-
Li, Y.1
Li, W.2
Jin, Y.X.3
-
16
-
-
23844530681
-
Asymmetry of intronic pre-miRNA structures in functional RISC assembly
-
Lin S.L., Chang D., Ying S.Y. (2005) Asymmetry of intronic pre-miRNA structures in functional RISC assembly. Gene 356: 32-38.
-
(2005)
Gene
, vol.356
, pp. 32-38
-
-
Lin, S.L.1
Chang, D.2
Ying, S.Y.3
-
17
-
-
51749111395
-
Roles of microRNA in Plant Defense and Virus Offense Interaction
-
Lu Y., Gan Q., Chi X., Qin S. (2008) Roles of microRNA in Plant Defense and Virus Offense Interaction. Plan Cell Rep. 27: 1571-1579.
-
(2008)
Plan Cell Rep
, vol.27
, pp. 1571-1579
-
-
Lu, Y.1
Gan, Q.2
Chi, X.3
Qin, S.4
-
18
-
-
0033591465
-
Ex-panded sequence dependence of thermodynamic para-meters improves prediction of RNA secondary structure
-
Mathews D.H., Sabina J., Zuker M., Turner D.H. (1999) Ex-panded sequence dependence of thermodynamic para-meters improves prediction of RNA secondary structure. J. Mol. Biol. 288: 911-940.
-
(1999)
J. Mol. Biol
, vol.288
, pp. 911-940
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
-
19
-
-
45749155980
-
Cloning, characterization, and ex-pression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
-
Mead E.A., Tu Z. (2008) Cloning, characterization, and ex-pression of microRNAs from the Asian malaria mosquito, Anopheles stephensi. BMC Genomics 23: 244-253.
-
(2008)
BMC Genomics
, vol.23
, pp. 244-253
-
-
Mead, E.A.1
Tu, Z.2
-
20
-
-
65349126424
-
Computational Prediction of microRNAs from Oil Palm (Elaeis guineensis Jacq.) Ex-pressed Sequence Tags
-
Nasaruddin M.N., Harikrishna K., Othman Y.R., Hoon S.L., Harikrishna A.J. (2007) Computational Prediction of microRNAs from Oil Palm (Elaeis guineensis Jacq.) Ex-pressed Sequence Tags. Asian Pacific. J. Mol. Biol. Biotechnol. 15: 107-111.
-
(2007)
Asian Pacific. J. Mol. Biol. Biotechnol
, vol.15
, pp. 107-111
-
-
Nasaruddin, M.N.1
Harikrishna, K.2
Othman, Y.R.3
Hoon, S.L.4
Harikrishna, A.J.5
-
21
-
-
14844339653
-
Nuclear processing and export of microRNAs in Arabidopsis
-
Park M.Y., Wu G., Gonzalez-Sulser A., Vaucheret H., Poethig R.S. (2005) Nuclear processing and export of microRNAs in Arabidopsis. Proc. Natl. Acad. Sci. USA 102: 3691-3696.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 3691-3696
-
-
Park, M.Y.1
Wu, G.2
Gonzalez-Sulser, A.3
Vaucheret, H.4
Poethig, R.S.5
-
22
-
-
44349119866
-
Mireval: A web tool for simple micro- RNA prediction in genome sequences
-
Ritchie W. et al. (2008) Mireval: a web tool for simple micro- RNA prediction in genome sequences. Bioinformatics 24: 1394-1396.
-
(2008)
Bioinformatics
, vol.24
, pp. 1394-1396
-
-
Ritchie, W.1
-
23
-
-
34547781750
-
MEGA4: Mo-lecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K., Dudley J., Nei M., Kumar S. (2007) MEGA4: Mo-lecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599
-
(2007)
Mol. Biol. Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
24
-
-
84883778034
-
Identification of conser-ved microRNAs and their target genes in tomato (Lyco-persicon esculentum)
-
Yin Z., Li C., Han X., Shen F. (2008) Identification of conser-ved microRNAs and their target genes in tomato (Lyco-persicon esculentum). Gene 41: 460-466.
-
(2008)
Gene
, vol.41
, pp. 460-466
-
-
Yin, Z.1
Li, C.2
Han, X.3
Shen, F.4
-
25
-
-
33745156778
-
Identification of 188 Conserved Maize microRNAs and Their Targets
-
Zhang B., Pan X., Anderson A.T. (2006) Identification of 188 Conserved Maize microRNAs and Their Targets. FEBS Lett. 580: 153753-153762.
-
(2006)
FEBS Lett
, vol.580
, pp. 153753-153762
-
-
Zhang, B.1
Pan, X.2
Anderson, A.T.3
-
26
-
-
29144527030
-
Plant microRNA: A Small Regulatory Molecule with Big Impact
-
Zhang B., Pan X., Cobb G.P., Anderson T. (2006) Plant microRNA: A Small Regulatory Molecule with Big Impact. Develop. Biol. 289: 3-16.
-
(2006)
Develop. Biol
, vol.289
, pp. 3-16
-
-
Zhang, B.1
Pan, X.2
Cobb, G.P.3
Anderson, T.4
-
27
-
-
41949100147
-
Iden-tification of conserved microRNAs and their target genes in tomato (Lycopersicon esculentum)
-
Zujun Yin, Chunhe Li, Xiulan Han, Fafu Shen (2008) Iden-tification of conserved microRNAs and their target genes in tomato (Lycopersicon esculentum). Gene 414: 60-66.
-
(2008)
Gene
, vol.414
, pp. 60-66
-
-
Yin, Z.1
Li, C.2
Han, X.3
Shen, F.4
-
28
-
-
0042121256
-
Mfold Web Server for Nucleic Acid Folding and Hybridization Prediction
-
Zuker M. (2003) Mfold Web Server for Nucleic Acid Folding and Hybridization Prediction. Nucl. Acids Res. 31: 3406-3415.
-
(2003)
Nucl. Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|