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Volumn 22, Issue 18, 2013, Pages 4711-4722

Late-glacial recolonization and phylogeography of European red deer (Cervus elaphus L.)

Author keywords

ancient DNA; contraction expansion model; LGM; phylogeography; red deer; Southern refugia

Indexed keywords

CERVIDAE; CERVUS ELAPHUS;

EID: 84883740462     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/mec.12420     Document Type: Article
Times cited : (73)

References (66)
  • 2
    • 0023496815 scopus 로고
    • Intraspecific Phylogeography - The Mitochondrial-DNA Bridge between Population-Genetics and Systematics
    • Avise JC, Arnold J, Ball RM, et al,. (1987) Intraspecific Phylogeography-the Mitochondrial-DNA Bridge between Population-Genetics and Systematics. Annual Review of Ecology and Systematics, 18, 489-522.
    • (1987) Annual Review of Ecology and Systematics , vol.18 , pp. 489-522
    • Avise, J.C.1    Arnold, J.2    Ball, R.M.3
  • 3
    • 84874198172 scopus 로고    scopus 로고
    • Ancient DNA identifies post-glacial recolonisation, not recent bottlenecks, as the primary driver of contemporary mtDNA phylogeography and diversity in Scandinavian brown bears
    • Bray SCE, Austin JJ, Metcalf JL, (2013) Ancient DNA identifies post-glacial recolonisation, not recent bottlenecks, as the primary driver of contemporary mtDNA phylogeography and diversity in Scandinavian brown bears. Diversity and Distributions, 19, 245-256.
    • (2013) Diversity and Distributions , vol.19 , pp. 245-256
    • Bray, S.C.E.1    Austin, J.J.2    Metcalf, J.L.3
  • 4
    • 84860990477 scopus 로고    scopus 로고
    • Phylogeographic, ancient DNA, fossil and morphometric analyses reveal ancient and modern introductions of a large mammal: The complex case of red deer (Cervus elaphus) in Ireland
    • Carden RF, McDevitt AD, Zachos FE, et al,. (2012) Phylogeographic, ancient DNA, fossil and morphometric analyses reveal ancient and modern introductions of a large mammal: the complex case of red deer (Cervus elaphus) in Ireland. Quaternary Science Reviews, 42, 74-84.
    • (2012) Quaternary Science Reviews , vol.42 , pp. 74-84
    • Carden, R.F.1    McDevitt, A.D.2    Zachos, F.E.3
  • 5
    • 12044258419 scopus 로고
    • Weighting, partitioning, and combining characters in phylogenetic analysis
    • Chippindale PT, Wiens JJ, (1994) Weighting, partitioning, and combining characters in phylogenetic analysis. Systematic Biology, 43, 278-287.
    • (1994) Systematic Biology , vol.43 , pp. 278-287
    • Chippindale, P.T.1    Wiens, J.J.2
  • 6
    • 0033146326 scopus 로고    scopus 로고
    • A mitochondrial control region and cytochrome b phylogeny of sika deer (Cervus nippon) and report of tandem repeats in the control region
    • Cook CE, Wang Y, Sensabaugh G, (1999) A mitochondrial control region and cytochrome b phylogeny of sika deer (Cervus nippon) and report of tandem repeats in the control region. Molecular Phylogenetics and Evolution, 12, 47-56.
    • (1999) Molecular Phylogenetics and Evolution , vol.12 , pp. 47-56
    • Cook, C.E.1    Wang, Y.2    Sensabaugh, G.3
  • 8
    • 84864453108 scopus 로고    scopus 로고
    • JModelTest 2: More models, new heuristics and parallel computing
    • Darriba D, Taboada GL, Doallo R, Posada D, (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods, 9, 772.
    • (2012) Nature Methods , vol.9 , pp. 772
    • Darriba, D.1    Taboada, G.L.2    Doallo, R.3    Posada, D.4
  • 9
    • 0010281348 scopus 로고
    • A deer of many lands: A guide to subspecies of the red deer Cervus elaphus L
    • Dolan JM, (1988) A deer of many lands: a guide to subspecies of the red deer Cervus elaphus L. Zoonooz, 62, 4-34.
    • (1988) Zoonooz , vol.62 , pp. 4-34
    • Dolan, J.M.1
  • 10
    • 0030817871 scopus 로고    scopus 로고
    • The mitochondrial control region of Cervidae: Evolutionary patterns and phylogenetic content
    • Douzery E, Randi E, (1997) The mitochondrial control region of Cervidae: evolutionary patterns and phylogenetic content. Molecular Biology and Evolution, 14, 1154-1166.
    • (1997) Molecular Biology and Evolution , vol.14 , pp. 1154-1166
    • Douzery, E.1    Randi, E.2
  • 11
    • 84868248240 scopus 로고    scopus 로고
    • Temporal genetic variation of the red fox, Vulpes vulpes, across western Europe and the British Isles
    • Edwards CJ, Soulsbury CD, Statham MJ, et al,. (2012) Temporal genetic variation of the red fox, Vulpes vulpes, across western Europe and the British Isles. Quaternary Science Reviews, 57, 95-104.
    • (2012) Quaternary Science Reviews , vol.57 , pp. 95-104
    • Edwards, C.J.1    Soulsbury, C.D.2    Statham, M.J.3
  • 12
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows
    • Excoffier L, Lischer HEL, (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources, 10, 564-567.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.E.L.2
  • 13
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein J, (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. Journal of Molecular Evolution, 17, 368-376.
    • (1981) Journal of Molecular Evolution , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 15
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood
    • Guindon S, Gascuel O, (2003) A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Systematic Biology, 52, 696-704.
    • (2003) Systematic Biology , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 16
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
    • Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O, (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology, 59, 307-321.
    • (2010) Systematic Biology , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 17
    • 0141494431 scopus 로고    scopus 로고
    • Genetic diversity in European red deer (Cervus elaphus L.): Anthropogenic influences on natural populations
    • Hartl GB, Zachos F, Nadlinger K, (2003) Genetic diversity in European red deer (Cervus elaphus L.): anthropogenic influences on natural populations. Comptes Rendus Biologies, 326, S37-S42.
    • (2003) Comptes Rendus Biologies , vol.326
    • Hartl, G.B.1    Zachos, F.2    Nadlinger, K.3
  • 18
    • 0022376704 scopus 로고
    • Dating of the human ape splitting by a molecular clock of mitochondrial-DNA
    • Hasegawa M, Kishino H, Yano TA, (1985) Dating of the human ape splitting by a molecular clock of mitochondrial-DNA. Journal of Molecular Evolution, 22, 160-174.
    • (1985) Journal of Molecular Evolution , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.A.3
  • 19
    • 0029860602 scopus 로고    scopus 로고
    • Some genetic consequences of ice ages, and their role in divergence and speciation
    • Hewitt GM, (1996) Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnean Society, 58, 247-276.
    • (1996) Biological Journal of the Linnean Society , vol.58 , pp. 247-276
    • Hewitt, G.M.1
  • 22
    • 81855164876 scopus 로고    scopus 로고
    • The earliest evidence for anatomically modern humans in northwestern Europe
    • Higham T, Compton T, Stringer C, et al,. (2011) The earliest evidence for anatomically modern humans in northwestern Europe. Nature, 479, 521-524.
    • (2011) Nature , vol.479 , pp. 521-524
    • Higham, T.1    Compton, T.2    Stringer, C.3
  • 23
    • 67650931294 scopus 로고    scopus 로고
    • Ecological change, range fluctuations and population dynamics during the pleistocene
    • Hofreiter M, Stewart J, (2009) Ecological change, range fluctuations and population dynamics during the pleistocene. Current Biology, 19, R584-R594.
    • (2009) Current Biology , vol.19
    • Hofreiter, M.1    Stewart, J.2
  • 25
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, Ronquist F, (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics, 17, 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 27
    • 0034028330 scopus 로고    scopus 로고
    • Phylogenetic relationships among European red deer, wapiti, and sika deer inferred from mitochondrial DNA sequences
    • Kuwayama R, Ozawa T, (2000) Phylogenetic relationships among European red deer, wapiti, and sika deer inferred from mitochondrial DNA sequences. Molecular Phylogenetics and Evolution, 15, 115-123.
    • (2000) Molecular Phylogenetics and Evolution , vol.15 , pp. 115-123
    • Kuwayama, R.1    Ozawa, T.2
  • 30
    • 52949102931 scopus 로고    scopus 로고
    • The impact of climate change on large mammal distribution and extinction: Evidence from the last glacial/interglacial transition
    • Lister AM, Stuart AJ, (2008) The impact of climate change on large mammal distribution and extinction: evidence from the last glacial/interglacial transition. Comptes Rendus Geoscience, 340, 615-620.
    • (2008) Comptes Rendus Geoscience , vol.340 , pp. 615-620
    • Lister, A.M.1    Stuart, A.J.2
  • 31
    • 84872701327 scopus 로고    scopus 로고
    • Extinction chronology of the woolly rhinoceros Coelodonta antiquitatis: Reply to Kuzmin
    • Lister AM, Stuart AJ, (2013) Extinction chronology of the woolly rhinoceros Coelodonta antiquitatis: reply to Kuzmin. Quaternary Science Reviews, 62, 144-146.
    • (2013) Quaternary Science Reviews , vol.62 , pp. 144-146
    • Lister, A.M.1    Stuart, A.J.2
  • 33
    • 60749096699 scopus 로고    scopus 로고
    • The human use of the montane zone of Cantabrian Spain during the Late Glacial: Faunal evidence from El Mirõn Cave
    • Marín-Arroyo AB, (2009) The human use of the montane zone of Cantabrian Spain during the Late Glacial: faunal evidence from El Mirõn Cave. Journal of Anthropological Research, 65, 69-102.
    • (2009) Journal of Anthropological Research , vol.65 , pp. 69-102
    • Marín-Arroyo, A.B.1
  • 35
    • 84860327269 scopus 로고    scopus 로고
    • La séquence mésolithique et néolithique du Trou Al'Wesse (Belgique): Résultats pluridisciplinaires
    • Miller R, Zwyns N, Otte M, Stevens C, Stewart J, (2012) La séquence mésolithique et néolithique du Trou Al'Wesse (Belgique): Résultats pluridisciplinaires. Anthropologie, 116, 99-126.
    • (2012) Anthropologie , vol.116 , pp. 99-126
    • Miller, R.1    Zwyns, N.2    Otte, M.3    Stevens, C.4    Stewart, J.5
  • 36
    • 78149290297 scopus 로고    scopus 로고
    • Molecular biogeography of red deer Cervus elaphus from eastern Europe: Insights from mitochondrial DNA sequences
    • Niedzialkowska M, Jedrzejewska B, Honnen AC, et al,. (2011) Molecular biogeography of red deer Cervus elaphus from eastern Europe: insights from mitochondrial DNA sequences. Acta Theriologica, 56, 1-12.
    • (2011) Acta Theriologica , vol.56 , pp. 1-12
    • Niedzialkowska, M.1    Jedrzejewska, B.2    Honnen, A.C.3
  • 37
    • 84857678741 scopus 로고    scopus 로고
    • Glacial survival of boreal trees in northern Scandinavia
    • Parducci L, Jorgensen T, Tollefsrud MM, et al,. (2012) Glacial survival of boreal trees in northern Scandinavia. Science, 335, 1083-1086.
    • (2012) Science , vol.335 , pp. 1083-1086
    • Parducci, L.1    Jorgensen, T.2    Tollefsrud, M.M.3
  • 39
    • 0032177822 scopus 로고    scopus 로고
    • Phylogeny of wapiti, red deer, sika deer, and other North American cervids as determined from mitochondrial DNA
    • Polziehn RO, Strobeck C, (1998) Phylogeny of wapiti, red deer, sika deer, and other North American cervids as determined from mitochondrial DNA. Molecular Phylogenetic and Evolution, 10, 249-258.
    • (1998) Molecular Phylogenetic and Evolution , vol.10 , pp. 249-258
    • Polziehn, R.O.1    Strobeck, C.2
  • 40
    • 0036360193 scopus 로고    scopus 로고
    • A phylogenetic comparison of red deer and wapiti using mitochondrial DNA
    • Polziehn RO, Strobeck C, (2002) A phylogenetic comparison of red deer and wapiti using mitochondrial DNA. Molecular Phylogenetic and Evolution, 22, 342-356.
    • (2002) Molecular Phylogenetic and Evolution , vol.22 , pp. 342-356
    • Polziehn, R.O.1    Strobeck, C.2
  • 41
    • 0035139147 scopus 로고    scopus 로고
    • Intraspecific gene genealogies: Trees grafting into networks
    • Posada D, Crandall KA, (2001) Intraspecific gene genealogies: trees grafting into networks. Trends in Ecology & Evolution, 16, 37-45.
    • (2001) Trends in Ecology & Evolution , vol.16 , pp. 37-45
    • Posada, D.1    Crandall, K.A.2
  • 42
    • 51449110361 scopus 로고    scopus 로고
    • Phylogeographic insights into cryptic glacial refugia
    • Provan J, Bennett KD, (2008) Phylogeographic insights into cryptic glacial refugia. Trends in Ecology & Evolution, 23, 564-571.
    • (2008) Trends in Ecology & Evolution , vol.23 , pp. 564-571
    • Provan, J.1    Bennett, K.D.2
  • 43
    • 84920093221 scopus 로고    scopus 로고
    • Phylogeography of South European mammals
    • (eds Weiss S. & Ferrand N.), Springe, Dordrecht
    • Randi E, (2007) Phylogeography of South European mammals. In: Phylogeography of Southern European Refugia (eds, Weiss S, &, Ferrand N,), pp. 101-126. Springe, Dordrecht.
    • (2007) Phylogeography of Southern European Refugia , pp. 101-126
    • Randi, E.1
  • 44
    • 0002989023 scopus 로고    scopus 로고
    • A mitochondrial DNA control region phylogeny of the Cervinae: Speciation in Cervus and implications for conservation
    • Randi E, Mucci N, Claro-Hergueta F, Bonnet A, Douzery EJP, (2001) A mitochondrial DNA control region phylogeny of the Cervinae: speciation in Cervus and implications for conservation. Animal Conservation, 4, 1-11.
    • (2001) Animal Conservation , vol.4 , pp. 1-11
    • Randi, E.1    Mucci, N.2    Claro-Hergueta, F.3    Bonnet, A.4    Douzery, E.J.P.5
  • 45
    • 77950339815 scopus 로고    scopus 로고
    • INTCAL09 and MARINE09 radiocarbon age calibration curves, 0-50,000 years cal BP
    • Reimer P, Baillie M, Bard E, et al,. (2009) INTCAL09 and MARINE09 radiocarbon age calibration curves, 0-50,000 years cal BP. Radiocarbon, 51, 1111-1150.
    • (2009) Radiocarbon , vol.51 , pp. 1111-1150
    • Reimer, P.1    Baillie, M.2    Bard, E.3
  • 46
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP, (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 47
    • 84866551549 scopus 로고    scopus 로고
    • Reconstructing the history of a fragmented and heavily exploited red deer population using ancient and contemporary DNA
    • Rosvold J, Røed KH, Hufthammer AK, Andersen R, Stenøien HK, (2012) Reconstructing the history of a fragmented and heavily exploited red deer population using ancient and contemporary DNA. BMC Evolutionary Biology, 12, 191.
    • (2012) BMC Evolutionary Biology , vol.12 , pp. 191
    • Rosvold, J.1    Røed, K.H.2    Hufthammer, A.K.3    Andersen, R.4    Stenøien, H.K.5
  • 48
    • 57549095597 scopus 로고    scopus 로고
    • Phylogeography of red deer (Cervus elaphus) in Europe
    • Skog A, Zachos FE, Rueness EK, et al,. (2009) Phylogeography of red deer (Cervus elaphus) in Europe. Journal of Biogeography, 36, 66-77.
    • (2009) Journal of Biogeography , vol.36 , pp. 66-77
    • Skog, A.1    Zachos, F.E.2    Rueness, E.K.3
  • 49
    • 33845492841 scopus 로고    scopus 로고
    • Glacial refugia of mammals in Europe: Evidence from fossil records
    • Sommer RS, Nadachowski A, (2006) Glacial refugia of mammals in Europe: evidence from fossil records. Mammal Review, 36, 251-265.
    • (2006) Mammal Review , vol.36 , pp. 251-265
    • Sommer, R.S.1    Nadachowski, A.2
  • 50
    • 43049183002 scopus 로고    scopus 로고
    • Late Quaternary distribution dynamics and phylogeography of the red deer (Cervus elaphus) in Europe
    • Sommer RS, Zachos FE, Street M, et al,. (2008) Late Quaternary distribution dynamics and phylogeography of the red deer (Cervus elaphus) in Europe. Quaternary Science Reviews, 27, 714-733.
    • (2008) Quaternary Science Reviews , vol.27 , pp. 714-733
    • Sommer, R.S.1    Zachos, F.E.2    Street, M.3
  • 51
    • 0035500901 scopus 로고    scopus 로고
    • Cryptic northern refugia and the origins of the modern biota
    • Stewart JR, Lister AM, (2001) Cryptic northern refugia and the origins of the modern biota. Trends in Ecology & Evolution, 16, 608-613.
    • (2001) Trends in Ecology & Evolution , vol.16 , pp. 608-613
    • Stewart, J.R.1    Lister, A.M.2
  • 53
    • 0242349244 scopus 로고    scopus 로고
    • El Mirõn cave and the 14C chronology of Cantabrian Spain
    • Straus LG, González-Morales MR, (2003) El Mirõn cave and the 14C chronology of Cantabrian Spain. Radiocarbon, 45, 41-58.
    • (2003) Radiocarbon , vol.45 , pp. 41-58
    • Straus, L.G.1    González-Morales, M.R.2
  • 54
    • 57849154544 scopus 로고    scopus 로고
    • Further radiocarbon dates for the Upper Paleolithic of El Mirõn Cave (Ramales de la Victoria, Cantabria, Spain)
    • Straus LG, González-Morales MR, (2007) Further radiocarbon dates for the Upper Paleolithic of El Mirõn Cave (Ramales de la Victoria, Cantabria, Spain). Radiocarbon, 49, 1205-1214.
    • (2007) Radiocarbon , vol.49 , pp. 1205-1214
    • Straus, L.G.1    González-Morales, M.R.2
  • 55
    • 84876916569 scopus 로고    scopus 로고
    • Cantabrian Spain University of New Mexico Press, Albuquerque
    • Straus LG, González-Morales MR, (2012) El Miron Cave. Cantabrian Spain University of New Mexico Press, Albuquerque.
    • (2012) El Miron Cave
    • Straus, L.G.1    González-Morales, M.R.2
  • 56
    • 0028254128 scopus 로고
    • Mitochondrial-DNA polymorphism, phylogeography, and conservation genetics of the brown bear ursus-arctos in Europe
    • Taberlet P, Bouvet J, (1994) Mitochondrial-DNA polymorphism, phylogeography, and conservation genetics of the brown bear ursus-arctos in Europe. Proceedings of the Royal Society of London Series B-Biological Sciences, 255, 195-200.
    • (1994) Proceedings of the Royal Society of London Series B-Biological Sciences , vol.255 , pp. 195-200
    • Taberlet, P.1    Bouvet, J.2
  • 57
  • 58
    • 78650127889 scopus 로고    scopus 로고
    • HapStar: Automated haplotype network layout and visualisation
    • Teacher AGF, Griffiths DJ, (2011) HapStar: automated haplotype network layout and visualisation. Molecular Ecology Resources, 11, 151-153.
    • (2011) Molecular Ecology Resources , vol.11 , pp. 151-153
    • Teacher, A.G.F.1    Griffiths, D.J.2
  • 59
    • 79960560291 scopus 로고    scopus 로고
    • Modern and ancient red fox (Vulpes vulpes) in Europe show an unusual lack of geographical and temporal structuring, and differing responses within the carnivores to historical climatic change
    • Teacher AGF, Thomas JA, Barnes I, (2011) Modern and ancient red fox (Vulpes vulpes) in Europe show an unusual lack of geographical and temporal structuring, and differing responses within the carnivores to historical climatic change. BMC Evolutionary Biology, 11, 214.
    • (2011) BMC Evolutionary Biology , vol.11 , pp. 214
    • Teacher, A.G.F.1    Thomas, J.A.2    Barnes, I.3
  • 60
    • 37249061678 scopus 로고    scopus 로고
    • Staying out in the cold: Glacial refugia and mitochondrial DNA phylogeography in ancient European brown bears
    • Valdiosera CE, Garcia N, Anderung C, et al,. (2007) Staying out in the cold: glacial refugia and mitochondrial DNA phylogeography in ancient European brown bears. Molecular Ecology, 16, 5140-5148.
    • (2007) Molecular Ecology , vol.16 , pp. 5140-5148
    • Valdiosera, C.E.1    Garcia, N.2    Anderung, C.3
  • 64
    • 0034105589 scopus 로고    scopus 로고
    • The full-glacial forests of central and southeastern Europe
    • Willis K, Rudner E, Sümegi P, (2000) The full-glacial forests of central and southeastern Europe. Quaternary Research, 53, 203-213.
    • (2000) Quaternary Research , vol.53 , pp. 203-213
    • Willis, K.1    Rudner, E.2    Sümegi, P.3
  • 66
    • 79952825866 scopus 로고    scopus 로고
    • Phylogeography, population genetics and conservation of the European red deer Cervus elaphus
    • Zachos FE, Hartl GB, (2011) Phylogeography, population genetics and conservation of the European red deer Cervus elaphus. Mammal Review, 41, 138-150.
    • (2011) Mammal Review , vol.41 , pp. 138-150
    • Zachos, F.E.1    Hartl, G.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.