메뉴 건너뛰기




Volumn 13, Issue 1, 2013, Pages

The saliva microbiome of Pan and Homo

Author keywords

[No Author keywords available]

Indexed keywords

AFRICA; APE; ARTICLE; CHIMPANZEE; GORILLA; HUMAN; MICROBIAL DIVERSITY; MICROBIOME; NONHUMAN; ORANG UTAN; PHYLOGENY; SALIVA ANALYSIS; ZOO ANIMAL; ADULT; ANIMAL; COMPARATIVE STUDY; GERMANY; MICROBIOLOGY; MICROFLORA; PAN PANISCUS; PAN TROGLODYTES; SALIVA; YOUNG ADULT;

EID: 84883643159     PISSN: None     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-13-204     Document Type: Article
Times cited : (40)

References (46)
  • 6
    • 79961205560 scopus 로고    scopus 로고
    • The evolution of infectious agents in relation to sex in animals and humans: Brief discussions of some individual organisms
    • 10.1111/j.1749-6632.2011.06133.x 21824167
    • The evolution of infectious agents in relation to sex in animals and humans: brief discussions of some individual organisms. Reed DL, Currier RW, Walton SF, Conrad M, Sullivan SA, Carlton JM, Read TD, Severini A, Tyler S, Eberle R, et al. Ann N Y Acad Sci 2011 1230 74 107 10.1111/j.1749-6632.2011. 06133.x 21824167
    • (2011) Ann N y Acad Sci , vol.1230 , pp. 74-107
    • Reed, D.L.1    Currier, R.W.2    Walton, S.F.3    Conrad, M.4    Sullivan, S.A.5    Carlton, J.M.6    Read, T.D.7    Severini, A.8    Tyler, S.9    Eberle, R.10
  • 9
    • 78649978358 scopus 로고    scopus 로고
    • Evolutionary relationships of wild hominids recapitulated by gut microbial communities
    • 10.1371/journal.pbio.1000546 21103409
    • Evolutionary relationships of wild hominids recapitulated by gut microbial communities. Ochman H, Worobey M, Kuo CH, Ndjango JB, Peeters M, Hahn BH, Hugenholtz P, PLoS Biol 2010 8 1000546 10.1371/journal.pbio.1000546 21103409
    • (2010) PLoS Biol , vol.8 , pp. 51000546
    • Ochman, H.1    Worobey, M.2    Kuo, C.H.3    Ndjango, J.B.4    Peeters, M.5    Hahn, B.H.6    Hugenholtz, P.7
  • 14
    • 63849171250 scopus 로고    scopus 로고
    • Global diversity in the human salivary microbiome
    • 10.1101/gr.084616.108 19251737
    • Global diversity in the human salivary microbiome. Nasidze I, Li J, Quinque D, Tang K, Stoneking M, Genome Res 2009 19 636 643 10.1101/gr.084616.108 19251737
    • (2009) Genome Res , vol.19 , pp. 636-643
    • Nasidze, I.1    Li, J.2    Quinque, D.3    Tang, K.4    Stoneking, M.5
  • 15
    • 80051695033 scopus 로고    scopus 로고
    • High diversity of the saliva microbiome in batwa pygmies
    • 10.1371/journal.pone.0023352 21858083
    • High diversity of the saliva microbiome in batwa pygmies. Nasidze I, Li J, Schroeder R, Creasey JL, Li M, Stoneking M, PloS one 2011 6 23352 10.1371/journal.pone.0023352 21858083
    • (2011) PloS One , vol.6 , pp. 523352
    • Nasidze, I.1    Li, J.2    Schroeder, R.3    Creasey, J.L.4    Li, M.5    Stoneking, M.6
  • 17
    • 79955736490 scopus 로고    scopus 로고
    • Multispecies communities: Interspecies interactions influence growth on saliva as sole nutritional source
    • 10.4248/IJOS11025 21485308
    • Multispecies communities: interspecies interactions influence growth on saliva as sole nutritional source. Kolenbrander PE, Int J Oral Sci 2011 3 49 54 10.4248/IJOS11025 21485308
    • (2011) Int J Oral Sci , vol.3 , pp. 49-54
    • Kolenbrander, P.E.1
  • 18
    • 77953620116 scopus 로고    scopus 로고
    • Oral multispecies biofilm development and the key role of cell-cell distance
    • 10.1038/nrmicro2381 20514044
    • Oral multispecies biofilm development and the key role of cell-cell distance. Kolenbrander PE, Palmer RJ Jr, Periasamy S, Jakubovics NS, Nat Rev Microbiol 2010 8 471 480 10.1038/nrmicro2381 20514044
    • (2010) Nat Rev Microbiol , vol.8 , pp. 471-480
    • Kolenbrander, P.E.1    Palmer Jr., R.J.2    Periasamy, S.3    Jakubovics, N.S.4
  • 19
    • 73449128271 scopus 로고    scopus 로고
    • Fast UniFrac: Facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
    • 10.1038/ismej.2009.97 19710709
    • Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data. Hamady M, Lozupone C, Knight R, Isme Journal 2010 4 17 27 10.1038/ismej.2009.97 19710709
    • (2010) Isme Journal , vol.4 , pp. 17-27
    • Hamady, M.1    Lozupone, C.2    Knight, R.3
  • 20
    • 0026499429 scopus 로고
    • Conservation evaluation and phylogenetic diversity
    • 10.1016/0006-3207(92)91201-3
    • Conservation evaluation and phylogenetic diversity. Faith DP, Biol Conserv 1992 61 1 10 10.1016/0006-3207(92)91201-3
    • (1992) Biol Conserv , vol.61 , pp. 1-10
    • Faith, D.P.1
  • 21
    • 67650021209 scopus 로고    scopus 로고
    • Microbial community profiling for human microbiome projects: Tools, techniques, and challenges
    • 10.1101/gr.085464.108 19383763
    • Microbial community profiling for human microbiome projects: tools, techniques, and challenges. Hamady M, Knight R, Genome Res 2009 19 1141 1152 10.1101/gr.085464.108 19383763
    • (2009) Genome Res , vol.19 , pp. 1141-1152
    • Hamady, M.1    Knight, R.2
  • 22
    • 84855294263 scopus 로고    scopus 로고
    • Beyond the Venn diagram: The hunt for a core microbiome
    • 10.1111/j.1462-2920.2011.02585.x 22004523
    • Beyond the Venn diagram: the hunt for a core microbiome. Shade A, Handelsman J, Environ Microbiol 2012 14 4 12 10.1111/j.1462-2920.2011.02585.x 22004523
    • (2012) Environ Microbiol , vol.14 , pp. 4-12
    • Shade, A.1    Handelsman, J.2
  • 24
    • 34548704267 scopus 로고    scopus 로고
    • Similarity of bacterial populations in saliva from African-American mother-child dyads
    • 10.1128/JCM.00771-07 17634300
    • Similarity of bacterial populations in saliva from African-American mother-child dyads. Li Y, Ismail AI, Ge Y, Tellez M, Sohn W, J Clin Microbiol 2007 45 3082 3085 10.1128/JCM.00771-07 17634300
    • (2007) J Clin Microbiol , vol.45 , pp. 3082-3085
    • Li, Y.1    Ismail, A.I.2    Ge, Y.3    Tellez, M.4    Sohn, W.5
  • 25
    • 80051514697 scopus 로고    scopus 로고
    • Comparative analysis of salivary bacterial microbiome diversity in edentulous infants and their mothers or primary care givers using pyrosequencing
    • 10.1371/journal.pone.0023503 21853142
    • Comparative analysis of salivary bacterial microbiome diversity in edentulous infants and their mothers or primary care givers using pyrosequencing. Cephas KD, Kim J, Mathai RA, Barry KA, Dowd SE, Meline BS, Swanson KS, PloS one 2011 6 23503 10.1371/journal.pone.0023503 21853142
    • (2011) PloS One , vol.6 , pp. 523503
    • Cephas, K.D.1    Kim, J.2    Mathai, R.A.3    Barry, K.A.4    Dowd, S.E.5    Meline, B.S.6    Swanson, K.S.7
  • 26
    • 77957168527 scopus 로고    scopus 로고
    • Study of inter- and intra-individual variations in the salivary microbiota
    • 10.1186/1471-2164-11-523 20920195
    • Study of inter- and intra-individual variations in the salivary microbiota. Lazarevic V, Whiteson K, Hernandez D, Francois P, Schrenzel J, BMC genomics 2010 11 523 10.1186/1471-2164-11-523 20920195
    • (2010) BMC Genomics , vol.11 , pp. 523
    • Lazarevic, V.1    Whiteson, K.2    Hernandez, D.3    Francois, P.4    Schrenzel, J.5
  • 27
    • 84862162269 scopus 로고    scopus 로고
    • Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples
    • 10.1186/gb-2012-13-6-r42 22698087
    • Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples. Segata N, Haake SK, Mannon P, Lemon KP, Waldron L, Gevers D, Huttenhower C, Izard J, Genome Biol 2012 13 42 10.1186/gb-2012-13-6-r42 22698087
    • (2012) Genome Biol , vol.13 , pp. 1842
    • Segata, N.1    Haake, S.K.2    Mannon, P.3    Lemon, K.P.4    Waldron, L.5    Gevers, D.6    Huttenhower, C.7    Izard, J.8
  • 28
    • 74949134895 scopus 로고    scopus 로고
    • Defining the healthy core microbiome of oral microbial communities
    • 10.1186/1471-2180-9-259 20003481
    • Defining the healthy "core microbiome" of oral microbial communities. Zaura E, Keijser BJ, Huse SM, Crielaard W, BMC Microbiol 2009 9 259 10.1186/1471-2180-9-259 20003481
    • (2009) BMC Microbiol , vol.9 , pp. 259
    • Zaura, E.1    Keijser, B.J.2    Huse, S.M.3    Crielaard, W.4
  • 29
    • 70749146810 scopus 로고    scopus 로고
    • Enterobacteriacaeae and pseudomonadaceae on the dorsum of the human tongue
    • 19936511
    • Enterobacteriacaeae and pseudomonadaceae on the dorsum of the human tongue. Conti S, dos Santos SS, Koga-Ito CY, Jorge AO, J Appl Oral Sci 2009 17 375 380 19936511
    • (2009) J Appl Oral Sci , vol.17 , pp. 375-380
    • Conti, S.1    Dos Santos, S.S.2    Koga-Ito, C.Y.3    Jorge, A.O.4
  • 30
    • 0028388745 scopus 로고
    • Oral and oropharyngeal prevalence of Enterobacteriaceae in humans: A review
    • 10.1111/j.1600-0714.1994.tb01096.x 8021843
    • Oral and oropharyngeal prevalence of Enterobacteriaceae in humans: a review. Sedgley CM, Samaranayake LP, J Oral Pathol Med 1994 23 104 113 10.1111/j.1600-0714.1994.tb01096.x 8021843
    • (1994) J Oral Pathol Med , vol.23 , pp. 104-113
    • Sedgley, C.M.1    Samaranayake, L.P.2
  • 33
    • 77958077392 scopus 로고    scopus 로고
    • In vitro communities derived from oral and gut microbial floras inhibit the growth of bacteria of foreign origins
    • 10.1007/s00248-010-9711-9 20625712
    • In vitro communities derived from oral and gut microbial floras inhibit the growth of bacteria of foreign origins. He X, Tian Y, Guo L, Ano T, Lux R, Zusman DR, Shi W, Microb Ecol 2010 60 665 676 10.1007/s00248-010-9711-9 20625712
    • (2010) Microb Ecol , vol.60 , pp. 665-676
    • He, X.1    Tian, Y.2    Guo, L.3    Ano, T.4    Lux, R.5    Zusman, D.R.6    Shi, W.7
  • 34
    • 34548779029 scopus 로고    scopus 로고
    • Long-term maintenance of species-specific bacterial microbiota in the basal metazoan Hydra
    • 10.1073/pnas.0703375104 17664430
    • Long-term maintenance of species-specific bacterial microbiota in the basal metazoan Hydra. Fraune S, Bosch TC, Proc Natl Acad Sci U S A 2007 104 13146 13151 10.1073/pnas.0703375104 17664430
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 13146-13151
    • Fraune, S.1    Bosch, T.C.2
  • 35
    • 52049092682 scopus 로고    scopus 로고
    • Worlds within worlds: Evolution of the vertebrate gut microbiota
    • 10.1038/nrmicro1978 18794915
    • Worlds within worlds: evolution of the vertebrate gut microbiota. Ley RE, Lozupone CA, Hamady M, Knight R, Gordon JI, Nat Rev Microbiol 2008 6 776 788 10.1038/nrmicro1978 18794915
    • (2008) Nat Rev Microbiol , vol.6 , pp. 776-788
    • Ley, R.E.1    Lozupone, C.A.2    Hamady, M.3    Knight, R.4    Gordon, J.I.5
  • 36
    • 33646832209 scopus 로고    scopus 로고
    • Evaluation of saliva as a source of human DNA for population and association studies
    • 10.1016/j.ab.2006.03.021 16620753
    • Evaluation of saliva as a source of human DNA for population and association studies. Quinque D, Kittler R, Kayser M, Stoneking M, Nasidze I, Anal Biochem 2006 353 272 277 10.1016/j.ab.2006.03.021 16620753
    • (2006) Anal Biochem , vol.353 , pp. 272-277
    • Quinque, D.1    Kittler, R.2    Kayser, M.3    Stoneking, M.4    Nasidze, I.5
  • 38
    • 39449089394 scopus 로고    scopus 로고
    • Parallel tagged sequencing on the 454 platform
    • 10.1038/nprot.2007.520 18274529
    • Parallel tagged sequencing on the 454 platform. Meyer M, Stenzel U, Hofreiter M, Nat Protoc 2008 3 267 278 10.1038/nprot.2007.520 18274529
    • (2008) Nat Protoc , vol.3 , pp. 267-278
    • Meyer, M.1    Stenzel, U.2    Hofreiter, M.3
  • 39
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin (version 3.0): An integrated software package for population genetics data analysis
    • Arlequin (version 3.0): an integrated software package for population genetics data analysis. Excoffier L, Laval G, Schneider S, Evol Bioinform 2005 1 47 50
    • (2005) Evol Bioinform , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 40
    • 0027804103 scopus 로고
    • Non-parametric multivariate analysis of changes in community structure
    • 10.1111/j.1442-9993.1993.tb00438.x
    • Non-parametric multivariate analysis of changes in community structure. Clarke KR, Aust J Ecol 1993 18 117 143 10.1111/j.1442-9993.1993.tb00438.x
    • (1993) Aust J Ecol , vol.18 , pp. 117-143
    • Clarke, K.R.1
  • 41
    • 34848903220 scopus 로고    scopus 로고
    • From correlation to causation networks: A simple approximate learning algorithm and its application to high-dimensional plant gene expression data
    • 10.1186/1752-0509-1-37 17683609
    • From correlation to causation networks: a simple approximate learning algorithm and its application to high-dimensional plant gene expression data. Opgen-Rhein R, Strimmer K, BMC Syst Biol 2007 1 37 10.1186/1752-0509-1-37 17683609
    • (2007) BMC Syst Biol , vol.1 , pp. 37
    • Opgen-Rhein, R.1    Strimmer, K.2
  • 42
    • 65549111754 scopus 로고    scopus 로고
    • Infernal 1.0: Inference of RNA alignments
    • 10.1093/bioinformatics/btp157 19307242
    • Infernal 1.0: inference of RNA alignments. Nawrocki EP, Kolbe DL, Eddy SR, Bioinformatics 2009 25 1335 1337 10.1093/bioinformatics/btp157 19307242
    • (2009) Bioinformatics , vol.25 , pp. 1335-1337
    • Nawrocki, E.P.1    Kolbe, D.L.2    Eddy, S.R.3
  • 43
    • 67649327176 scopus 로고    scopus 로고
    • FastTree: Computing large minimum evolution trees with profiles instead of a distance matrix
    • 10.1093/molbev/msp077 19377059
    • FastTree: computing large minimum evolution trees with profiles instead of a distance matrix. Price MN, Dehal PS, Arkin AP, Mol Biol Evol 2009 26 1641 1650 10.1093/molbev/msp077 19377059
    • (2009) Mol Biol Evol , vol.26 , pp. 1641-1650
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 45
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2.8: New features for data integration and network visualization
    • 10.1093/bioinformatics/btq675 21149340
    • Cytoscape 2.8: new features for data integration and network visualization. Smoot ME, Ono K, Ruscheinski J, Wang PL, Ideker T, Bioinformatics 2011 27 431 432 10.1093/bioinformatics/btq675 21149340
    • (2011) Bioinformatics , vol.27 , pp. 431-432
    • Smoot, M.E.1    Ono, K.2    Ruscheinski, J.3    Wang, P.L.4    Ideker, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.