SCOPUS 정보 검색 플랫폼

Volumn 538, Issue 1, 2013, Pages 34-40

Structural basis of substrate selectivity of Δ1-pyrroline- 5-carboxylate dehydrogenase (ALDH4A1): Semialdehyde chain length

(2) Pemberton, Travis A a Tanner, John J a,b

a UNIVERSITY OF MISSOURI (United States)

b University of Missouri (United States)

Author keywords

Aldehyde dehydrogenase; ALDH4A1; Proline catabolism; Substrate recognition; X ray crystallography

Indexed keywords

ACETIC ACID; ALDEHYDE; CARBON; CYSTEINE; GLUTAMIC ACID; GLUTARIC ACID; GLYOXYLIC ACID; MALONIC ACID; PYRROLINE 5 CARBOXYLATE DEHYDROGENASE; SUCCINIC ACID;

ARTICLE; BINDING KINETICS; BINDING SITE; CHEMICAL STRUCTURE; COVALENT BOND; CRYSTAL STRUCTURE; ENZYME ACTIVITY; ENZYME BINDING; ENZYME INHIBITION; PRIORITY JOURNAL;

ALDEHYDE DEHYDROGENASE; ALDH4A1; PROLINE CATABOLISM; SUBSTRATE RECOGNITION; X-RAY CRYSTALLOGRAPHY;

1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE; ANIMALS; ANIONS; CARBOXYLIC ACIDS; CATALYTIC DOMAIN; CRYSTALLOGRAPHY, X-RAY; GLYOXYLATES; HUMANS; HYDROLYSIS; LIGANDS; MICE; MODELS, MOLECULAR; PROLINE; PROTEIN BINDING; STRUCTURE-ACTIVITY RELATIONSHIP; SUBSTRATE SPECIFICITY; SUCCINATE-SEMIALDEHYDE DEHYDROGENASE;

EID: 84883511429 PISSN: 00039861 EISSN: 10960384 Source Type: Journal
DOI: 10.1016/j.abb.2013.07.024 Document Type: Article

Times cited : (25)

References (39)

1
- 53849128901
- J.J. Tanner Amino Acids 35 2008 719 730
- (2008) Amino Acids , vol.35 , pp. 719-730
- Tanner, J.J.¹

2
- 0018890003
- E. Adams, and L. Frank Annu. Rev. Biochem. 49 1980 1005 1061
- (1980) Annu. Rev. Biochem. , vol.49 , pp. 1005-1061
- Adams, E.¹ Frank, L.²

3
- 0018545768
- D. Valle, S.I. Goodman, S.C. Harris, and J.M. Phang J. Clin. Invest. 64 1979 1365 1370
- (1979) J. Clin. Invest. , vol.64 , pp. 1365-1370
- Valle, D.¹ Goodman, S.I.² Harris, S.C.³ Phang, J.M.⁴

4
- 0031596295
- M.T. Geraghty, D. Vaughn, A.J. Nicholson, W.W. Lin, G. Jimenez-Sanchez, C. Obie, M.P. Flynn, D. Valle, and C.A. Hu Hum. Mol. Genet. 7 1998 1411 1415
- (1998) Hum. Mol. Genet. , vol.7 , pp. 1411-1415
- Geraghty, M.T.¹ Vaughn, D.² Nicholson, A.J.³ Lin, W.W.⁴ Jimenez-Sanchez, G.⁵ Obie, C.⁶ Flynn, M.P.⁷ Valle, D.⁸ Hu, C.A.⁹

5
- 0003720078
- C.R. Scriver, A.L. Beaudet, W.S. Sly, D. Valle, McGraw Hill New York
- J.M. Phang, C.A. Hu, and D. Valle C.R. Scriver, A.L. Beaudet, W.S. Sly, D. Valle, Metabolic and molecular basis of inherited disease 2001 McGraw Hill New York 1821 1838
- (2001) Metabolic and Molecular Basis of Inherited Disease , pp. 1821-1838
- Phang, J.M.¹ Hu, C.A.² Valle, D.³

6
- 0017136450
- D. Valle, S.I. Goodman, D.A. Applegarth, V.E. Shih, and J.M. Phang J. Clin. Invest. 58 1976 598 603
- (1976) J. Clin. Invest. , vol.58 , pp. 598-603
- Valle, D.¹ Goodman, S.I.² Applegarth, D.A.³ Shih, V.E.⁴ Phang, J.M.⁵

7
- 1942520427
- K.A. Yoon, Y. Nakamura, and H. Arakawa J. Hum. Genet. 49 2004 134 140
- (2004) J. Hum. Genet. , vol.49 , pp. 134-140
- Yoon, K.A.¹ Nakamura, Y.² Arakawa, H.³

8
- 0030930366
- K. Polyak, Y. Xia, J.L. Zweier, K.W. Kinzler, and B. Vogelstein Nature 389 1997 300 305
- (1997) Nature , vol.389 , pp. 300-305
- Polyak, K.¹ Xia, Y.² Zweier, J.L.³ Kinzler, K.W.⁴ Vogelstein, B.⁵

9
- 53849096017
- J.M. Phang, S.P. Donald, J. Pandhare, and Y. Liu Amino Acids 35 2008 681 690
- (2008) Amino Acids , vol.35 , pp. 681-690
- Phang, J.M.¹ Donald, S.P.² Pandhare, J.³ Liu, Y.⁴

10
- 54749113722
- J.M. Phang, J. Pandhare, and Y. Liu J. Nutr. 138 2008 2008S 2015S
- (2008) J. Nutr. , vol.138
- Phang, J.M.¹ Pandhare, J.² Liu, Y.³

11
- 84871196795
- J.M. Phang, W. Liu, C. Hancock, and K.J. Christian Front. Oncol. 2 2012 60
- (2012) Front. Oncol. , vol.2 , pp. 60
- Phang, J.M.¹ Liu, W.² Hancock, C.³ Christian, K.J.⁴

12
- 84883420006
- 10.1089/ars.2012.5074
- X. Liang, L. Zhang, S.K. Natarajan, and D.F. Becker Antioxid. Redox Signal. 2013 10.1089/ars.2012.5074
- (2013) Antioxid. Redox Signal.
- Liang, X.¹ Zhang, L.² Natarajan, S.K.³ Becker, D.F.⁴

13
- 84884413621
- 10.1534/genetics.1113.150326
- I.R. Lee, E.Y. Lui, E.W. Chow, S.D. Arras, C.A. Morrow, and J.A. Fraser Genetics 2013 10.1534/genetics.1113.150326
- (2013) Genetics
- Lee, I.R.¹ Lui, E.Y.² Chow, E.W.³ Arras, S.D.⁴ Morrow, C.A.⁵ Fraser, J.A.⁶

14
- 84865306276
- R.S. Lijek, S.L. Luque, Q. Liu, D. Parker, T. Bae, and J.N. Weiser Proc. Natl. Acad. Sci. USA 109 2012 13823 13828
- (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 13823-13828
- Lijek, R.S.¹ Luque, S.L.² Liu, Q.³ Parker, D.⁴ Bae, T.⁵ Weiser, J.N.⁶

15
- 17744419979
- N.A. Sophos, and V. Vasiliou Chem. Biol. Interact. 143-144 2003 5 22
- (2003) Chem. Biol. Interact. , vol.143-144 , pp. 5-22
- Sophos, N.A.¹ Vasiliou, V.²

16
- 0037866381
- S.J. Perez-Miller, and T.D. Hurley Biochemistry 42 2003 7100 7109
- (2003) Biochemistry , vol.42 , pp. 7100-7109
- Perez-Miller, S.J.¹ Hurley, T.D.²

17
- 0031570328
- C.G. Steinmetz, P. Xie, H. Weiner, and T.D. Hurley Structure 5 1997 701 711
- (1997) Structure , vol.5 , pp. 701-711
- Steinmetz, C.G.¹ Xie, P.² Weiner, H.³ Hurley, T.D.⁴

18
- 0028961395
- J. Farres, T.T. Wang, S.J. Cunningham, and H. Weiner Biochemistry 34 1995 2592 2598
- (1995) Biochemistry , vol.34 , pp. 2592-2598
- Farres, J.¹ Wang, T.T.² Cunningham, S.J.³ Weiner, H.⁴

19
- 0024260938
- J. Farres, P. Julia, and X. Pares Biochem. J. 256 1988 461 467
- (1988) Biochem. J. , vol.256 , pp. 461-467
- Farres, J.¹ Julia, P.² Pares, X.³

20
- 0024402817
- C. Forte-McRobbie, and R. Pietruszko Biochem. J. 261 1989 935 943
- (1989) Biochem. J. , vol.261 , pp. 935-943
- Forte-Mcrobbie, C.¹ Pietruszko, R.²

21
- 0022970206
- C.M. Forte-McRobbie, and R. Pietruszko J. Biol. Chem. 261 1986 2154 2163
- (1986) J. Biol. Chem. , vol.261 , pp. 2154-2163
- Forte-Mcrobbie, C.M.¹ Pietruszko, R.²

22
- 0025066552
- W.C. Small, and M.E. Jones J. Biol. Chem. 265 1990 18668 18672
- (1990) J. Biol. Chem. , vol.265 , pp. 18668-18672
- Small, W.C.¹ Jones, M.E.²

23
- 84862015934
- D. Srivastava, R.K. Singh, M.A. Moxley, M.T. Henzl, D.F. Becker, and J.J. Tanner J. Mol. Biol. 420 2012 176 189
- (2012) J. Mol. Biol. , vol.420 , pp. 176-189
- Srivastava, D.¹ Singh, R.K.² Moxley, M.A.³ Henzl, M.T.⁴ Becker, D.F.⁵ Tanner, J.J.⁶

24
- 76449099287
- W. Kabsch Acta Crystallogr. D Biol. Crystallogr. 66 2010 125 132
- (2010) Acta Crystallogr. D Biol. Crystallogr. , vol.66 , pp. 125-132
- Kabsch, W.¹

25
- 33644875355
- P. Evans Acta Cryst. D62 2006 72 82
- (2006) Acta Cryst. , vol.62 D , pp. 72-82
- Evans, P.¹

26
- 76449098262
- P.D. Adams, P.V. Afonine, G. Bunkoczi, V.B. Chen, I.W. Davis, N. Echols, J.J. Headd, L.W. Hung, G.J. Kapral, R.W. Grosse-Kunstleve, A.J. McCoy, N.W. Moriarty, R. Oeffner, R.J. Read, D.C. Richardson, J.S. Richardson, T.C. Terwilliger, and P.H. Zwart Acta Crystallogr. D Biol. Crystallogr. 66 2010 213 221
- (2010) Acta Crystallogr. D Biol. Crystallogr. , vol.66 , pp. 213-221
- Adams, P.D.¹ Afonine, P.V.² Bunkoczi, G.³ Chen, V.B.⁴ Davis, I.W.⁵ Echols, N.⁶ Headd, J.J.⁷ Hung, L.W.⁸ Kapral, G.J.⁹ Grosse-Kunstleve, R.W.¹⁰ McCoy, A.J.¹¹ Moriarty, N.W.¹² Oeffner, R.¹³ Read, R.J.¹⁴ Richardson, D.C.¹⁵ Richardson, J.S.¹⁶ Terwilliger, T.C.¹⁷ Zwart, P.H.¹⁸

27
- 84864872530
- T.A. Pemberton, B.R. Still, E.M. Christensen, H. Singh, D. Srivastava, and J.J. Tanner Acta Crystallogr. D Biol. Crystallogr. 68 2012 1010 1018
- (2012) Acta Crystallogr. D Biol. Crystallogr. , vol.68 , pp. 1010-1018
- Pemberton, T.A.¹ Still, B.R.² Christensen, E.M.³ Singh, H.⁴ Srivastava, D.⁵ Tanner, J.J.⁶

28
- 13244281317
- P. Emsley, and K. Cowtan Acta Cryst. D60 2004 2126 2132
- (2004) Acta Cryst. , vol.60 D , pp. 2126-2132
- Emsley, P.¹ Cowtan, K.²

29
- 70349597601
- N.W. Moriarty, R.W. Grosse-Kunstleve, and P.D. Adams Acta Crystallogr. D Biol. Crystallogr. 65 2009 1074 1080
- (2009) Acta Crystallogr. D Biol. Crystallogr. , vol.65 , pp. 1074-1080
- Moriarty, N.W.¹ Grosse-Kunstleve, R.W.² Adams, P.D.³

30
- 4544344217
- Z. Feng, L. Chen, H. Maddula, O. Akcan, R. Oughtred, H.M. Berman, and J. Westbrook Bioinformatics 20 2004 2153 2155
- (2004) Bioinformatics , vol.20 , pp. 2153-2155
- Feng, Z.¹ Chen, L.² Maddula, H.³ Akcan, O.⁴ Oughtred, R.⁵ Berman, H.M.⁶ Westbrook, J.⁷

31
- 33748094644
- E. Inagaki, N. Ohshima, H. Takahashi, C. Kuroishi, S. Yokoyama, and T.H. Tahirov J. Mol. Biol. 362 2006 490 501
- (2006) J. Mol. Biol. , vol.362 , pp. 490-501
- Inagaki, E.¹ Ohshima, N.² Takahashi, H.³ Kuroishi, C.⁴ Yokoyama, S.⁵ Tahirov, T.H.⁶

32
- 84875231432
- H. Riveros-Rosas, L. Gonzalez-Segura, A. Julian-Sanchez, A.G. Diaz-Sanchez, and R.A. Munoz-Clares Chem. Biol. Interact. 202 2013 51 61
- (2013) Chem. Biol. Interact. , vol.202 , pp. 51-61
- Riveros-Rosas, H.¹ Gonzalez-Segura, L.² Julian-Sanchez, A.³ Diaz-Sanchez, A.G.⁴ Munoz-Clares, R.A.⁵

33
- 33845374932
- R.G. Pearson J. Am. Chem. Soc. 108 1986 6109 6114
- (1986) J. Am. Chem. Soc. , vol.108 , pp. 6109-6114
- Pearson, R.G.¹

34
- 0031552979
- G.D. Hawkins, C.J. Cramer, and D.G. Truhlar J. Phys. Chem. B 101 1997 7147 7157
- (1997) J. Phys. Chem. B , vol.101 , pp. 7147-7157
- Hawkins, G.D.¹ Cramer, C.J.² Truhlar, D.G.³

35
- 0035978392
- J. Wang, W. Wang, S. Huo, M. Lee, and P.A. Kollman J. Phys. Chem. B 105 2001 5055 5067
- (2001) J. Phys. Chem. B , vol.105 , pp. 5055-5067
- Wang, J.¹ Wang, W.² Huo, S.³ Lee, M.⁴ Kollman, P.A.⁵

36
- 84930474801
- V. Koppaka, D.C. Thompson, Y. Chen, M. Ellermann, K.C. Nicolaou, R.O. Juvonen, D. Petersen, R.A. Deitrich, T.D. Hurley, and V. Vasiliou Pharmacol. Rev. 64 2012 520 539
- (2012) Pharmacol. Rev. , vol.64 , pp. 520-539
- Koppaka, V.¹ Thompson, D.C.² Chen, Y.³ Ellermann, M.⁴ Nicolaou, K.C.⁵ Juvonen, R.O.⁶ Petersen, D.⁷ Deitrich, R.A.⁸ Hurley, T.D.⁹ Vasiliou, V.¹⁰

37
- 0035066836
- M. Weiss J. Appl. Cryst. 34 2001 130 135
- (2001) J. Appl. Cryst. , vol.34 , pp. 130-135
- Weiss, M.¹

38
- 0037441653
- S.C. Lovell, I.W. Davis, W.B. Arendall 3rd, P.I. de Bakker, J.M. Word, M.G. Prisant, J.S. Richardson, and D.C. Richardson Proteins 50 2003 437 450
- (2003) Proteins , vol.50 , pp. 437-450
- Lovell, S.C.¹ Davis, I.W.² Arendall III, W.B.³ De Bakker, P.I.⁴ Word, J.M.⁵ Prisant, M.G.⁶ Richardson, J.S.⁷ Richardson, D.C.⁸

39
- 0004293491
- DeLano Scientific Palo Alto, CA, USA
- W.L. DeLano The PyMOL User's Manual 2002 DeLano Scientific Palo Alto, CA, USA
- (2002) The PyMOL User's Manual
- Delano, W.L.¹

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.