-
1
-
-
0037150614
-
Sex determination and sex differentiation in fish: an overview of genetic, physiological, and environmental influences
-
Devlin RH, Nagahama Y. Sex determination and sex differentiation in fish: an overview of genetic, physiological, and environmental influences. Aquaculture 2002, 208:191-364.
-
(2002)
Aquaculture
, vol.208
, pp. 191-364
-
-
Devlin, R.H.1
Nagahama, Y.2
-
2
-
-
0037198690
-
DMY is a Y-specific DM-domain gene required for male development in the medaka fish
-
10.1038/nature751, 12037570
-
Matsuda M, Nagahama Y, Shinomiya A, Sato T, Matsuda C, Kobayashi T, Morrey CE, Shibata N, Asakawa S, Shimizu N, Hori H, Hamaguchi S, Sakaizumi M. DMY is a Y-specific DM-domain gene required for male development in the medaka fish. Nature 2002, 417:559-563. 10.1038/nature751, 12037570.
-
(2002)
Nature
, vol.417
, pp. 559-563
-
-
Matsuda, M.1
Nagahama, Y.2
Shinomiya, A.3
Sato, T.4
Matsuda, C.5
Kobayashi, T.6
Morrey, C.E.7
Shibata, N.8
Asakawa, S.9
Shimizu, N.10
Hori, H.11
Hamaguchi, S.12
Sakaizumi, M.13
-
3
-
-
84860588719
-
Tracing the emergence of a novel sex-determining gene in medaka, Oryzias luzonensis
-
10.1534/genetics.111.137497, 3338257, 22367037
-
Myosho T, Otake H, Masuyama H, Matsuda M, Kuroki Y, Fujiyama A, Naruse K, Hamaguchi S, Sakaizumi M. Tracing the emergence of a novel sex-determining gene in medaka, Oryzias luzonensis. Genetics 2012, 191:163-170. 10.1534/genetics.111.137497, 3338257, 22367037.
-
(2012)
Genetics
, vol.191
, pp. 163-170
-
-
Myosho, T.1
Otake, H.2
Masuyama, H.3
Matsuda, M.4
Kuroki, Y.5
Fujiyama, A.6
Naruse, K.7
Hamaguchi, S.8
Sakaizumi, M.9
-
4
-
-
84857407869
-
A Y-linked anti-Müllerian hormone duplication takes over a critical role in sex determination
-
10.1073/pnas.1018392109, 3286941, 22323585
-
Hattori RS, Murai Y, Oura M, Masuda S, Majhi SK, Sakamoto T, Fernandino JI, Somoza GM, Yokota M, Strüssmann CA. A Y-linked anti-Müllerian hormone duplication takes over a critical role in sex determination. Proc Natl Acad Sci U S A 2012, 109:2955-2959. 10.1073/pnas.1018392109, 3286941, 22323585.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 2955-2959
-
-
Hattori, R.S.1
Murai, Y.2
Oura, M.3
Masuda, S.4
Majhi, S.K.5
Sakamoto, T.6
Fernandino, J.I.7
Somoza, G.M.8
Yokota, M.9
Strüssmann, C.A.10
-
5
-
-
84864577738
-
A trans-species missense SNP in Amhr2 is associated with sex determination in the tiger pufferfish, Takifugu rubripes (fugu)
-
10.1371/journal.pgen.1002798, 3395601, 22807687
-
Kamiya T, Kai W, Tasumi S, Oka A, Matsunaga T, Mizuno N, Fujita M, Suetake H, Suzuki S, Hosoya S, Tohari S, Brenner S, Miyadai T, Venkatesh B, Suzuki Y, Kikuchi K. A trans-species missense SNP in Amhr2 is associated with sex determination in the tiger pufferfish, Takifugu rubripes (fugu). PLoS Genet 2012, 8:e1002798. 10.1371/journal.pgen.1002798, 3395601, 22807687.
-
(2012)
PLoS Genet
, vol.8
-
-
Kamiya, T.1
Kai, W.2
Tasumi, S.3
Oka, A.4
Matsunaga, T.5
Mizuno, N.6
Fujita, M.7
Suetake, H.8
Suzuki, S.9
Hosoya, S.10
Tohari, S.11
Brenner, S.12
Miyadai, T.13
Venkatesh, B.14
Suzuki, Y.15
Kikuchi, K.16
-
6
-
-
84864583284
-
An immune-related gene evolved into the master sex-determining gene in rainbow trout, Oncorhynchus mykiss
-
10.1016/j.cub.2012.05.045, 22727696
-
Yano A, Guyomard R, Nicol B, Jouanno E, Quillet E, Klopp C, Cabau C, Bouchez O, Fostier A, Guiguen Y. An immune-related gene evolved into the master sex-determining gene in rainbow trout, Oncorhynchus mykiss. Curr Biol 2012, 22:1423-1428. 10.1016/j.cub.2012.05.045, 22727696.
-
(2012)
Curr Biol
, vol.22
, pp. 1423-1428
-
-
Yano, A.1
Guyomard, R.2
Nicol, B.3
Jouanno, E.4
Quillet, E.5
Klopp, C.6
Cabau, C.7
Bouchez, O.8
Fostier, A.9
Guiguen, Y.10
-
7
-
-
0018603702
-
Temperature-dependent sex determination in turtles
-
10.1126/science.505003, 505003
-
Bull JJ, Vogt RC. Temperature-dependent sex determination in turtles. Science 1979, 206:1186-1188. 10.1126/science.505003, 505003.
-
(1979)
Science
, vol.206
, pp. 1186-1188
-
-
Bull, J.J.1
Vogt, R.C.2
-
8
-
-
0019974904
-
Temperature of egg incubation determines sex in Alligator mississippiensis
-
10.1038/296850a0, 7070524
-
Ferguson MW, Joanen T. Temperature of egg incubation determines sex in Alligator mississippiensis. Nature 1982, 296:850-853. 10.1038/296850a0, 7070524.
-
(1982)
Nature
, vol.296
, pp. 850-853
-
-
Ferguson, M.W.1
Joanen, T.2
-
9
-
-
0037015066
-
A duplicated copy of DMRT1 in the sex-determining region of the Y chromosome of the medaka, Oryzias latipes
-
10.1073/pnas.182314699, 129345, 12193652
-
Nanda I, Kondo M, Hornung U, Asakawa S, Winkler C, Shimizu A, Shan Z, Haaf T, Shimizu N, Shima A, Schmid M, Schartl M. A duplicated copy of DMRT1 in the sex-determining region of the Y chromosome of the medaka, Oryzias latipes. Proc Natl Acad Sci U S A 2002, 99:11778-11783. 10.1073/pnas.182314699, 129345, 12193652.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 11778-11783
-
-
Nanda, I.1
Kondo, M.2
Hornung, U.3
Asakawa, S.4
Winkler, C.5
Shimizu, A.6
Shan, Z.7
Haaf, T.8
Shimizu, N.9
Shima, A.10
Schmid, M.11
Schartl, M.12
-
10
-
-
27644503612
-
Induction of female-to-male sex reversal by high temperature treatment in Medaka, Oryzias latipes
-
10.2108/zsj.22.985, 16219978
-
Sato T, Endo T, Yamahira K, Hamaguchi S, Sakaizumi M. Induction of female-to-male sex reversal by high temperature treatment in Medaka, Oryzias latipes. Zoolog Sci 2005, 22:985-988. 10.2108/zsj.22.985, 16219978.
-
(2005)
Zoolog Sci
, vol.22
, pp. 985-988
-
-
Sato, T.1
Endo, T.2
Yamahira, K.3
Hamaguchi, S.4
Sakaizumi, M.5
-
11
-
-
58549121150
-
Blurring the edges in vertebrate sex determination
-
10.1016/j.gde.2008.11.004, 2660668, 19152784
-
Barske LA, Capel B. Blurring the edges in vertebrate sex determination. Curr Opin Genet Dev 2008, 18:499-505. 10.1016/j.gde.2008.11.004, 2660668, 19152784.
-
(2008)
Curr Opin Genet Dev
, vol.18
, pp. 499-505
-
-
Barske, L.A.1
Capel, B.2
-
12
-
-
3042784853
-
Two unlinked loci controlling the sex of blue tilapia (Oreochromis aureus)
-
10.1038/sj.hdy.6800453, 15100706
-
Lee B-Y, Hulata G, Kocher TD. Two unlinked loci controlling the sex of blue tilapia (Oreochromis aureus). Heredity 2004, 92:543-549. 10.1038/sj.hdy.6800453, 15100706.
-
(2004)
Heredity
, vol.92
, pp. 543-549
-
-
Lee, B.-Y.1
Hulata, G.2
Kocher, T.D.3
-
13
-
-
0029479684
-
The growth pattern and sexual maturation of Atlantic halibut (Hippoglossus hippoglossus L) reared in large tanks for 3 years
-
Bjornsson B. The growth pattern and sexual maturation of Atlantic halibut (Hippoglossus hippoglossus L) reared in large tanks for 3 years. Aquaculture 1995, 138:281-290.
-
(1995)
Aquaculture
, vol.138
, pp. 281-290
-
-
Bjornsson, B.1
-
14
-
-
83555161681
-
Induced sex reversal using an aromatase inhibitor, Fadrozole, in Atlantic halibut (Hippoglossus hippoglossus L)
-
Babiak J, Babiak I, Van Nes S, Harboe T, Haugen T, Norberg B. Induced sex reversal using an aromatase inhibitor, Fadrozole, in Atlantic halibut (Hippoglossus hippoglossus L). Aquaculture 2012, 324-325:276-280.
-
(2012)
Aquaculture
, vol.324-325
, pp. 276-280
-
-
Babiak, J.1
Babiak, I.2
Van Nes, S.3
Harboe, T.4
Haugen, T.5
Norberg, B.6
-
15
-
-
64649088019
-
Sex determination in flatfishes: mechanisms and environmental influences
-
10.1016/j.semcdb.2008.12.002, 19121404
-
Luckenbach JA, Borski RJ, Daniels HV, Godwin J. Sex determination in flatfishes: mechanisms and environmental influences. Semin Cell Dev Biol 2009, 20:256-263. 10.1016/j.semcdb.2008.12.002, 19121404.
-
(2009)
Semin Cell Dev Biol
, vol.20
, pp. 256-263
-
-
Luckenbach, J.A.1
Borski, R.J.2
Daniels, H.V.3
Godwin, J.4
-
17
-
-
39749168279
-
Effect of rearing temperature on sex ratio in juvenile Atlantic halibut, Hippoglossus hippoglossus
-
Hughes V, Benfey TJ, Martin-Robichaud DJ. Effect of rearing temperature on sex ratio in juvenile Atlantic halibut, Hippoglossus hippoglossus. Environ Biol Fish 2008, 81:415-419.
-
(2008)
Environ Biol Fish
, vol.81
, pp. 415-419
-
-
Hughes, V.1
Benfey, T.J.2
Martin-Robichaud, D.J.3
-
18
-
-
0037413999
-
Hormonal sex reversal of Atlantic halibut (Hippoglossus hippoglossus L)
-
Hendry CI, Martin-Robichaud DJ, Benfey TJ. Hormonal sex reversal of Atlantic halibut (Hippoglossus hippoglossus L). Aquaculture 2003, 219:769-781.
-
(2003)
Aquaculture
, vol.219
, pp. 769-781
-
-
Hendry, C.I.1
Martin-Robichaud, D.J.2
Benfey, T.J.3
-
19
-
-
54249117547
-
Directive 2003/74/EC of the European parliament and of the council
-
Directorate General for Health and Consumers
-
Directorate General for Health and Consumers Directive 2003/74/EC of the European parliament and of the council. Off J Eur Union 2003, L 262:17-21. Directorate General for Health and Consumers.
-
(2003)
Off J Eur Union
, vol.L 262
, pp. 17-21
-
-
-
20
-
-
52049113356
-
Fish gonadogenesis Part II: molecular biology and genomics of sex differentiation
-
Piferrer F, Guiguen Y. Fish gonadogenesis Part II: molecular biology and genomics of sex differentiation. Rev Fish Sci 2008, 16:35-55.
-
(2008)
Rev Fish Sci
, vol.16
, pp. 35-55
-
-
Piferrer, F.1
Guiguen, Y.2
-
21
-
-
35548966569
-
A genetic linkage map of Atlantic halibut (Hippoglossus hippoglossus L)
-
10.1534/genetics.107.075374, 2034623, 17720928
-
Reid DP, Smith CA, Rommens M, Blanchard B, Martin-Robichaud D, Reith M. A genetic linkage map of Atlantic halibut (Hippoglossus hippoglossus L). Genetics 2007, 177:1193-1205. 10.1534/genetics.107.075374, 2034623, 17720928.
-
(2007)
Genetics
, vol.177
, pp. 1193-1205
-
-
Reid, D.P.1
Smith, C.A.2
Rommens, M.3
Blanchard, B.4
Martin-Robichaud, D.5
Reith, M.6
-
22
-
-
33846874137
-
Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers
-
10.1101/gr.5681207, 1781356, 17189378
-
Miller MR, Dunham JP, Amores A, Cresko WA, Johnson EA. Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers. Genome Res 2007, 17:240-248. 10.1101/gr.5681207, 1781356, 17189378.
-
(2007)
Genome Res
, vol.17
, pp. 240-248
-
-
Miller, M.R.1
Dunham, J.P.2
Amores, A.3
Cresko, W.A.4
Johnson, E.A.5
-
23
-
-
54449098752
-
Rapid SNP discovery and genetic mapping using sequenced RAD markers
-
10.1371/journal.pone.0003376, 2557064, 18852878
-
Baird NA, Etter PD, Atwood TS, Currey MC, Shiver AL, Lewis ZA, Selker EU, Cresko WA, Johnson EA. Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One 2008, 3:e3376. 10.1371/journal.pone.0003376, 2557064, 18852878.
-
(2008)
PLoS One
, vol.3
-
-
Baird, N.A.1
Etter, P.D.2
Atwood, T.S.3
Currey, M.C.4
Shiver, A.L.5
Lewis, Z.A.6
Selker, E.U.7
Cresko, W.A.8
Johnson, E.A.9
-
24
-
-
84863630901
-
Multiple sex-associated regions and a putative sex chromosome in zebrafish revealed by RAD mapping and population genomics
-
10.1371/journal.pone.0040701, 3392230, 22792396
-
Anderson JL, Rodriguez Mari A, Braasch I, Amores A, Hohenlohe PA, Batzel P, Postlethwait JH. Multiple sex-associated regions and a putative sex chromosome in zebrafish revealed by RAD mapping and population genomics. PLoS One 2012, 7:e40701. 10.1371/journal.pone.0040701, 3392230, 22792396.
-
(2012)
PLoS One
, vol.7
-
-
Anderson, J.L.1
Rodriguez Mari, A.2
Braasch, I.3
Amores, A.4
Hohenlohe, P.A.5
Batzel, P.6
Postlethwait, J.H.7
-
25
-
-
84884299558
-
Stacks: building and genotyping Loci De Novo from short-read sequences
-
2011, 3276136, 22384329
-
Catchen JM, Amores A, Hohenlohe PA, Cresko WA, Postlethwait JH. Stacks: building and genotyping Loci De Novo from short-read sequences. G3 2011, 1:171-182. 2011, 3276136, 22384329.
-
(2011)
G3
, vol.1
, pp. 171-182
-
-
Catchen, J.M.1
Amores, A.2
Hohenlohe, P.A.3
Cresko, W.A.4
Postlethwait, J.H.5
-
26
-
-
84873084821
-
Applications of next-generation sequencing to phylogeography and phylogenetics
-
McCormack JE, Hird SM, Zellmer AJ, Carstens BC, Brumfield RT. Applications of next-generation sequencing to phylogeography and phylogenetics. Mol Phylogenet Evol 2011, 66:526-538.
-
(2011)
Mol Phylogenet Evol
, vol.66
, pp. 526-538
-
-
McCormack, J.E.1
Hird, S.M.2
Zellmer, A.J.3
Carstens, B.C.4
Brumfield, R.T.5
-
27
-
-
0030851365
-
The karyotype of the Atlantic halibut, Hippoglossus hippoglossus (Linnaeus)
-
Brown NP, Bromage NR, Penman DJ, Shields RJ. The karyotype of the Atlantic halibut, Hippoglossus hippoglossus (Linnaeus). Aquac Research 1997, 28:489-491.
-
(1997)
Aquac Research
, vol.28
, pp. 489-491
-
-
Brown, N.P.1
Bromage, N.R.2
Penman, D.J.3
Shields, R.J.4
-
28
-
-
80051478843
-
Genome evolution and meiotic maps by massively parallel DNA sequencing: spotted gar, an outgroup for the teleost genome duplication
-
10.1534/genetics.111.127324, 3176089, 21828280
-
Amores A, Catchen JM, Ferrara A, Fontenot Q, Postlethwait JH. Genome evolution and meiotic maps by massively parallel DNA sequencing: spotted gar, an outgroup for the teleost genome duplication. Genetics 2011, 188:799-808. 10.1534/genetics.111.127324, 3176089, 21828280.
-
(2011)
Genetics
, vol.188
, pp. 799-808
-
-
Amores, A.1
Catchen, J.M.2
Ferrara, A.3
Fontenot, Q.4
Postlethwait, J.H.5
-
29
-
-
84855456602
-
A conserved haplotype controls parallel adaptation in geographically distant salmonid populations
-
10.1111/j.1365-294X.2011.05305.x, 3664428, 21988725
-
Miller MR, Brunelli JP, Wheeler PA, Liu S, Rexroad CE, Palti Y, Doe CQ, Thorgaard GH. A conserved haplotype controls parallel adaptation in geographically distant salmonid populations. Mol Ecol 2012, 21:237-249. 10.1111/j.1365-294X.2011.05305.x, 3664428, 21988725.
-
(2012)
Mol Ecol
, vol.21
, pp. 237-249
-
-
Miller, M.R.1
Brunelli, J.P.2
Wheeler, P.A.3
Liu, S.4
Rexroad, C.E.5
Palti, Y.6
Doe, C.Q.7
Thorgaard, G.H.8
-
30
-
-
67349287476
-
Genomic selection: prediction of accuracy and maximisation of long term response
-
10.1007/s10709-008-9308-0, 18704696
-
Goddard M. Genomic selection: prediction of accuracy and maximisation of long term response. Genetica 2009, 136:245-257. 10.1007/s10709-008-9308-0, 18704696.
-
(2009)
Genetica
, vol.136
, pp. 245-257
-
-
Goddard, M.1
-
31
-
-
34248189595
-
Governing sex determination in fish: regulatory putsches and ephemeral dictators
-
10.1159/000100030, 18391519
-
Volff JN, Nanda I, Schmid M, Schartl M. Governing sex determination in fish: regulatory putsches and ephemeral dictators. Sex Dev 2007, 1:85-99. 10.1159/000100030, 18391519.
-
(2007)
Sex Dev
, vol.1
, pp. 85-99
-
-
Volff, J.N.1
Nanda, I.2
Schmid, M.3
Schartl, M.4
-
32
-
-
0033616556
-
Studies on sex-manipulation and production of cloned populations in hirame, Paralichthys olivaceus (Temminck et Schlegel)
-
Yamamoto E. Studies on sex-manipulation and production of cloned populations in hirame, Paralichthys olivaceus (Temminck et Schlegel). Aquaculture 1999, 173:235-246.
-
(1999)
Aquaculture
, vol.173
, pp. 235-246
-
-
Yamamoto, E.1
-
33
-
-
80051668912
-
Genetic sex identification and the potential evolution of sex determination in Pacific Halibut (Hippoglossus stenolepis)
-
10.1007/s10126-011-9366-7, 21279406
-
Galindo HM, Loher T, Hauser L. Genetic sex identification and the potential evolution of sex determination in Pacific Halibut (Hippoglossus stenolepis). Mar Biotechnol 2011, 13:1027-1037. 10.1007/s10126-011-9366-7, 21279406.
-
(2011)
Mar Biotechnol
, vol.13
, pp. 1027-1037
-
-
Galindo, H.M.1
Loher, T.2
Hauser, L.3
-
34
-
-
77951769251
-
Isolation of sex-specific AFLP markers in spotted Halibut (Verasper variegatus)
-
Ma H, Chen S, Yang J, Ji X, Chen S, Tian Y, Bi J. Isolation of sex-specific AFLP markers in spotted Halibut (Verasper variegatus). Environ Biol Fish 2010, 88:9-14.
-
(2010)
Environ Biol Fish
, vol.88
, pp. 9-14
-
-
Ma, H.1
Chen, S.2
Yang, J.3
Ji, X.4
Chen, S.5
Tian, Y.6
Bi, J.7
-
35
-
-
71549166326
-
Identification of the major sex-determining region of Turbot (Scophthalmus maximus)
-
10.1534/genetics.109.107979, 2787431, 19786621
-
Martinez P, Bouza C, Hermida M, Fernandez J, Toro MA, Vera M, Pardo BG, Millan A, Fernandez C, Vilas R, Vinas A, Sanchez L, Felip A, Piferrer F, Ferreiro I, Cabaleiro S. Identification of the major sex-determining region of Turbot (Scophthalmus maximus). Genetics 2009, 183:1443-1452. 10.1534/genetics.109.107979, 2787431, 19786621.
-
(2009)
Genetics
, vol.183
, pp. 1443-1452
-
-
Martinez, P.1
Bouza, C.2
Hermida, M.3
Fernandez, J.4
Toro, M.A.5
Vera, M.6
Pardo, B.G.7
Millan, A.8
Fernandez, C.9
Vilas, R.10
Vinas, A.11
Sanchez, L.12
Felip, A.13
Piferrer, F.14
Ferreiro, I.15
Cabaleiro, S.16
-
36
-
-
70449526782
-
Construction of a genetic linkage map and mapping of a female-specific DNA marker in half-smooth tongue sole (Cynoglossus semilaevis)
-
10.1007/s10126-009-9184-3, 19214631
-
Liao X, Ma H-Y, Xu GB, Shao CW, Tian YS, Ji XS, Yang JF, Chen SL. Construction of a genetic linkage map and mapping of a female-specific DNA marker in half-smooth tongue sole (Cynoglossus semilaevis). Mar Biotechnol 2009, 11:699-709. 10.1007/s10126-009-9184-3, 19214631.
-
(2009)
Mar Biotechnol
, vol.11
, pp. 699-709
-
-
Liao, X.1
Ma, H.-Y.2
Xu, G.B.3
Shao, C.W.4
Tian, Y.S.5
Ji, X.S.6
Yang, J.F.7
Chen, S.L.8
-
37
-
-
0001091213
-
Isolation of a Y-Chromosomal DNA probe capable of determining genetic sex in Chinook salmon (Oncorhynchus tshawytscha)
-
Devlin RH, McNeil BK, Groves TDD, Donaldson EM. Isolation of a Y-Chromosomal DNA probe capable of determining genetic sex in Chinook salmon (Oncorhynchus tshawytscha). Can J Fish Aquat Sci 1991, 48:1606-1612.
-
(1991)
Can J Fish Aquat Sci
, vol.48
, pp. 1606-1612
-
-
Devlin, R.H.1
McNeil, B.K.2
Groves, T.D.D.3
Donaldson, E.M.4
-
38
-
-
84862183890
-
Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon
-
10.1186/1471-2164-13-244, 3520118, 22702806
-
Houston RD, Davey JW, Bishop SC, Lowe NR, Mota-Velasco JC, Hamilton A, Guy DR, Tinch AE, Thomson ML, Blaxter ML, Gharbi K, Bron JE, Taggart JB. Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon. BMC Genomics 2012, 13:244. 10.1186/1471-2164-13-244, 3520118, 22702806.
-
(2012)
BMC Genomics
, vol.13
, pp. 244
-
-
Houston, R.D.1
Davey, J.W.2
Bishop, S.C.3
Lowe, N.R.4
Mota-Velasco, J.C.5
Hamilton, A.6
Guy, D.R.7
Tinch, A.E.8
Thomson, M.L.9
Blaxter, M.L.10
Gharbi, K.11
Bron, J.E.12
Taggart, J.B.13
-
39
-
-
40849115094
-
Major quantitative trait loci affect resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar)
-
10.1534/genetics.107.082974, 2248365, 18245341
-
Houston RD, Haley CS, Hamilton A, Guy DR, Tinch AE, Taggart JB, McAndrew BJ, Bishop SC. Major quantitative trait loci affect resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar). Genetics 2008, 178:1109-1115. 10.1534/genetics.107.082974, 2248365, 18245341.
-
(2008)
Genetics
, vol.178
, pp. 1109-1115
-
-
Houston, R.D.1
Haley, C.S.2
Hamilton, A.3
Guy, D.R.4
Tinch, A.E.5
Taggart, J.B.6
McAndrew, B.J.7
Bishop, S.C.8
-
40
-
-
84857207047
-
SNP discovery and genotyping for evolutionary genetics using RAD sequencing
-
3658458, 22065437
-
Etter PD, Bassham S, Hohenlohe PA, Johnson EA, Cresko WA. SNP discovery and genotyping for evolutionary genetics using RAD sequencing. Methods Mol Biol 2011, 772:157-178. 3658458, 22065437.
-
(2011)
Methods Mol Biol
, vol.772
, pp. 157-178
-
-
Etter, P.D.1
Bassham, S.2
Hohenlohe, P.A.3
Johnson, E.A.4
Cresko, W.A.5
-
41
-
-
79955609628
-
Linkage mapping and comparative genomics using next-generation RAD sequencing of a non-model organism
-
10.1371/journal.pone.0019315, 3082572, 21541297
-
Baxter SW, Davey JW, Johnston JS, Shelton AM, Heckel DG, Jiggins CD, Blaxter ML. Linkage mapping and comparative genomics using next-generation RAD sequencing of a non-model organism. PLoS One 2011, 6:e19315. 10.1371/journal.pone.0019315, 3082572, 21541297.
-
(2011)
PLoS One
, vol.6
-
-
Baxter, S.W.1
Davey, J.W.2
Johnston, J.S.3
Shelton, A.M.4
Heckel, D.G.5
Jiggins, C.D.6
Blaxter, M.L.7
-
42
-
-
77649219524
-
Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags
-
10.1371/journal.pgen.1000862, 2829049, 20195501
-
Hohenlohe PA, Bassham S, Etter PD, Stiffler N, Johnson EA, Cresko WA. Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags. PLoS Genet 2010, 6:e1000862. 10.1371/journal.pgen.1000862, 2829049, 20195501.
-
(2010)
PLoS Genet
, vol.6
-
-
Hohenlohe, P.A.1
Bassham, S.2
Etter, P.D.3
Stiffler, N.4
Johnson, E.A.5
Cresko, W.A.6
-
43
-
-
43149115851
-
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
-
10.1101/gr.074492.107, 2336801, 18349386
-
Zerbino DR, Birney E. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 2008, 18:821-829. 10.1101/gr.074492.107, 2336801, 18349386.
-
(2008)
Genome Res
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
44
-
-
34547190185
-
OneMap: software for genetic mapping in outcrossing species
-
10.1111/j.2007.0018-0661.02000.x, 17663699
-
Margarido GR, Souza AP, Garcia AA. OneMap: software for genetic mapping in outcrossing species. Hereditas 2007, 144:78-79. 10.1111/j.2007.0018-0661.02000.x, 17663699.
-
(2007)
Hereditas
, vol.144
, pp. 78-79
-
-
Margarido, G.R.1
Souza, A.P.2
Garcia, A.A.3
-
45
-
-
34548451177
-
Genetic mapping in the presence of genotyping errors
-
10.1534/genetics.106.063982, 1950651, 17277374
-
Cartwright DA, Troggio M, Velasco R, Gutin A. Genetic mapping in the presence of genotyping errors. Genetics 2007, 176:2521-2527. 10.1534/genetics.106.063982, 1950651, 17277374.
-
(2007)
Genetics
, vol.176
, pp. 2521-2527
-
-
Cartwright, D.A.1
Troggio, M.2
Velasco, R.3
Gutin, A.4
-
46
-
-
0036196448
-
Linkage mapping of sex-specific differences
-
Wu R, Ma CX, Wu SS, Zeng ZB. Linkage mapping of sex-specific differences. Genet Res 2002, 79:85-96.
-
(2002)
Genet Res
, vol.79
, pp. 85-96
-
-
Wu, R.1
Ma, C.X.2
Wu, S.S.3
Zeng, Z.B.4
-
47
-
-
84899125256
-
Genetic-Mapper
-
Bekaert M. Genetic-Mapper. [https://code.google.com/p/genetic-mapper/].
-
-
-
Bekaert, M.1
-
49
-
-
56649122614
-
-
Brazil: Belo Horizonte
-
Seaton G, Hernandez J, Grunchec JA, White I, Allen J, De Koning DJ, Wei W, Berry D, Haley C, Knott S. GridQTL: a grid portal for QTL mapping of compute intensive datasets 2006, Brazil: Belo Horizonte.
-
(2006)
GridQTL: a grid portal for QTL mapping of compute intensive datasets
-
-
Seaton, G.1
Hernandez, J.2
Grunchec, J.A.3
White, I.4
Allen, J.5
De Koning, D.J.6
Wei, W.7
Berry, D.8
Haley, C.9
Knott, S.10
-
50
-
-
81255202789
-
-
Rotterdam, Netherlands: Annals of Human Genetics, 72
-
Gilbert H, Le Roy P, Moreno C, Robelin D, Elsen JM. QTLMAP, a software for QTL detection in outbred populations 2008, 694-694. Rotterdam, Netherlands: Annals of Human Genetics, 72.
-
(2008)
QTLMAP, a software for QTL detection in outbred populations
, pp. 694-694
-
-
Gilbert, H.1
Le Roy, P.2
Moreno, C.3
Robelin, D.4
Elsen, J.M.5
-
51
-
-
34447324105
-
GenABEL: an R library for genome-wide association analysis
-
10.1093/bioinformatics/btm108, 17384015
-
Aulchenko YS, Ripke S, Isaacs A, Van Duijn CM. GenABEL: an R library for genome-wide association analysis. Bioinformatics 2007, 23:1294-1296. 10.1093/bioinformatics/btm108, 17384015.
-
(2007)
Bioinformatics
, vol.23
, pp. 1294-1296
-
-
Aulchenko, Y.S.1
Ripke, S.2
Isaacs, A.3
Van Duijn, C.M.4
-
52
-
-
35048838105
-
Genomewide rapid association using mixed model and regression: a fast and simple method for genomewide pedigree-based quantitative trait loci association analysis
-
10.1534/genetics.107.075614, 2013682, 17660554
-
Aulchenko YS, De Koning DJ, Haley C. Genomewide rapid association using mixed model and regression: a fast and simple method for genomewide pedigree-based quantitative trait loci association analysis. Genetics 2007, 177:577-585. 10.1534/genetics.107.075614, 2013682, 17660554.
-
(2007)
Genetics
, vol.177
, pp. 577-585
-
-
Aulchenko, Y.S.1
De Koning, D.J.2
Haley, C.3
-
53
-
-
34047179603
-
SNPassoc: an R package to perform whole genome association studies
-
González JR, Armengol L, Solé X, Guinó E, Mercader JM, Estivill X, Moreno V. SNPassoc: an R package to perform whole genome association studies. Bioinformatics 2007, 23:644-645.
-
(2007)
Bioinformatics
, vol.23
, pp. 644-645
-
-
González, J.R.1
Armengol, L.2
Solé, X.3
Guinó, E.4
Mercader, J.M.5
Estivill, X.6
Moreno, V.7
-
54
-
-
76749092270
-
The WEKA data mining software
-
Hall M, Frank E, Holmes G, Pfahringer B, Reutemann P, Witten IH. The WEKA data mining software. ACM SIGKDD Explorations 2009, 11:10-18.
-
(2009)
ACM SIGKDD Explorations
, vol.11
, pp. 10-18
-
-
Hall, M.1
Frank, E.2
Holmes, G.3
Pfahringer, B.4
Reutemann, P.5
Witten, I.H.6
-
56
-
-
84858221706
-
Ensembl 2012
-
3245178, 22086963
-
Flicek P, Amode MR, Barrell D, Beal K, Brent S, Carvalho-Silva D, Clapham P, Coates G, Fairley S, Fitzgerald S, Gil L, Gordon L, Hendrix M, Hourlier T, Johnson N, Kahari AK, Keefe D, Keenan S, Kinsella R, Komorowska M, Koscielny G, Kulesha E, Larsson P, Longden I, McLaren W, Muffato M, Overduin B, Pignatelli M, Pritchard B, Riat HS, et al. Ensembl 2012. Nucleic Acids Res 2012, 40(Database issue):D84-90. 3245178, 22086963.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.DATABASE ISSUE
-
-
Flicek, P.1
Amode, M.R.2
Barrell, D.3
Beal, K.4
Brent, S.5
Carvalho-Silva, D.6
Clapham, P.7
Coates, G.8
Fairley, S.9
Fitzgerald, S.10
Gil, L.11
Gordon, L.12
Hendrix, M.13
Hourlier, T.14
Johnson, N.15
Kahari, A.K.16
Keefe, D.17
Keenan, S.18
Kinsella, R.19
Komorowska, M.20
Koscielny, G.21
Kulesha, E.22
Larsson, P.23
Longden, I.24
McLaren, W.25
Muffato, M.26
Overduin, B.27
Pignatelli, M.28
Pritchard, B.29
Riat, H.S.30
more..
-
57
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
|