메뉴 건너뛰기




Volumn 132, Issue 3, 2013, Pages

Whole-exome sequencing identifies tetratricopeptide repeat domain 7A (TTC7A) mutations for combined immunodeficiency with intestinal atresias

(31)  Chen, Rui a   Giliani, Silvia a   Lanzi, Gaetana a   Mias, George I a   Lonardi, Silvia b   Dobbs, Kerry b   Manis, John c   Im, Hogune a   Gallagher, Jennifer E a   Phanstiel, Douglas H a   Euskirchen, Ghia a   Lacroute, Philippe a   Bettinger, Keith a   Moratto, Daniele a   Weinacht, Katja c   Montin, Davide c   Gallo, Eleonora c   Mangili, Giovanna c   Porta, Fulvio d   Notarangelo, Lucia D d   more..


Author keywords

Combined immunodeficiency with multiple intestinal atresias; tetratricopeptide repeat domain 7A; thymus; whole exome sequencing

Indexed keywords

MESSENGER RNA; TETRATRICOPEPTIDE REPEAT PROTEIN; TETRATRICOPEPTIDE REPEAT PROTEIN 7A; UNCLASSIFIED DRUG;

EID: 84883247339     PISSN: 00916749     EISSN: 10976825     Source Type: Journal    
DOI: 10.1016/j.jaci.2013.06.013     Document Type: Article
Times cited : (128)

References (51)
  • 1
    • 0015675956 scopus 로고
    • Multiple atresias and a new syndrome of hereditary multiple atresias involving the gastrointestinal tract from stomach to rectum
    • F.M. Guttman, P. Braun, P.H. Garance, H. Blanchard, P.P. Collin, and L. Dallaire Multiple atresias and a new syndrome of hereditary multiple atresias involving the gastrointestinal tract from stomach to rectum J Pediatr Surg 8 1973 633 640
    • (1973) J Pediatr Surg , vol.8 , pp. 633-640
    • Guttman, F.M.1    Braun, P.2    Garance, P.H.3    Blanchard, H.4    Collin, P.P.5    Dallaire, L.6
  • 2
    • 0015098526 scopus 로고
    • Familial multiple-level intestinal atresias: Report of two siblings
    • H.G. Mishalany, and V.M. Der Kaloustian Familial multiple-level intestinal atresias: report of two siblings J Pediatr 79 1971 124 125
    • (1971) J Pediatr , vol.79 , pp. 124-125
    • Mishalany, H.G.1    Der Kaloustian, V.M.2
  • 3
    • 0025181206 scopus 로고
    • Severe combined immunodeficiency syndrome associated with autosomal recessive familial multiple gastrointestinal atresias: Study of a family
    • L.A. Moreno, F. Gottrand, D. Turck, S. Manouvrier-Hanu, F. Mazingue, and C. Morisot Severe combined immunodeficiency syndrome associated with autosomal recessive familial multiple gastrointestinal atresias: study of a family Am J Med Genet 37 1990 143 146
    • (1990) Am J Med Genet , vol.37 , pp. 143-146
    • Moreno, L.A.1    Gottrand, F.2    Turck, D.3    Manouvrier-Hanu, S.4    Mazingue, F.5    Morisot, C.6
  • 4
  • 5
    • 79955397637 scopus 로고    scopus 로고
    • Hereditary multiple intestinal atresia (HMIA) with severe combined immunodeficiency (SCID): A case report of two siblings and review of the literature on MIA, HMIA and HMIA with immunodeficiency over the last 50 years
    • Y.A. Ali, S. Rahman, V. Bhat, S. Al Thani, A. Ismail, and I. Bassiouny Hereditary multiple intestinal atresia (HMIA) with severe combined immunodeficiency (SCID): a case report of two siblings and review of the literature on MIA, HMIA and HMIA with immunodeficiency over the last 50 years BMJ Case Rep 2011 2011
    • (2011) BMJ Case Rep , vol.2011
    • Ali, Y.A.1    Rahman, S.2    Bhat, V.3    Al Thani, S.4    Ismail, A.5    Bassiouny, I.6
  • 7
    • 77950467492 scopus 로고    scopus 로고
    • Hereditary multiple intestinal atresias: 2 new cases and review of the literature
    • C. Cole, A. Freitas, M.S. Clifton, and M.M. Durham Hereditary multiple intestinal atresias: 2 new cases and review of the literature J Pediatr Surg 45 2010 E21 E24
    • (2010) J Pediatr Surg , vol.45
    • Cole, C.1    Freitas, A.2    Clifton, M.S.3    Durham, M.M.4
  • 8
    • 0027278437 scopus 로고
    • Multiple areas of intestinal atresia associated with immunodeficiency and posttransfusion graft-versus-host disease
    • M.W. Walker, M.A. Lovell, T.E. Kelly, W. Golden, and F.T. Saulsbury Multiple areas of intestinal atresia associated with immunodeficiency and posttransfusion graft-versus-host disease J Pediatr 123 1993 93 95
    • (1993) J Pediatr , vol.123 , pp. 93-95
    • Walker, M.W.1    Lovell, M.A.2    Kelly, T.E.3    Golden, W.4    Saulsbury, F.T.5
  • 9
    • 9844219730 scopus 로고    scopus 로고
    • Graft-versus-host disease after liver and small bowel transplantation in a child
    • J. Reyes, S. Todo, M. Green, E. Yunis, D. Schoner, and S. Kocoshis Graft-versus-host disease after liver and small bowel transplantation in a child Clin Transpl 11 1997 345 348
    • (1997) Clin Transpl , vol.11 , pp. 345-348
    • Reyes, J.1    Todo, S.2    Green, M.3    Yunis, E.4    Schoner, D.5    Kocoshis, S.6
  • 12
  • 13
  • 14
    • 0036461051 scopus 로고    scopus 로고
    • Atresias of the gastrointestinal tract in an inbred, previously unstudied population
    • D.B. Gahukamble, A.R. Adnan, and M. Al-Gadi Atresias of the gastrointestinal tract in an inbred, previously unstudied population Pediatr Surg Int 18 2002 40 42
    • (2002) Pediatr Surg Int , vol.18 , pp. 40-42
    • Gahukamble, D.B.1    Adnan, A.R.2    Al-Gadi, M.3
  • 15
    • 0036523608 scopus 로고    scopus 로고
    • Multiple gastrointestinal atresias in two consecutive siblings
    • D.B. Gahukamble, and L.D. Gahukamble Multiple gastrointestinal atresias in two consecutive siblings Pediatr Surg Int 18 2002 175 177
    • (2002) Pediatr Surg Int , vol.18 , pp. 175-177
    • Gahukamble, D.B.1    Gahukamble, L.D.2
  • 16
    • 84867331897 scopus 로고    scopus 로고
    • Systems biology: Personalized medicine for the future?
    • R. Chen, and M. Snyder Systems biology: personalized medicine for the future? Curr Opin Pharmacol 12 2012 623 628
    • (2012) Curr Opin Pharmacol , vol.12 , pp. 623-628
    • Chen, R.1    Snyder, M.2
  • 18
    • 84946490856 scopus 로고    scopus 로고
    • Personal genomes, quantitative dynamic omics and personalized medicine
    • G. Mias, and M. Snyder Personal genomes, quantitative dynamic omics and personalized medicine Quant Biol 1 2013 71 90
    • (2013) Quant Biol , vol.1 , pp. 71-90
    • Mias, G.1    Snyder, M.2
  • 19
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • H. Li, and R. Durbin Fast and accurate short read alignment with Burrows-Wheeler transform Bioinformatics 25 2009 1754 1760
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 20
    • 77956295988 scopus 로고    scopus 로고
    • The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
    • A. McKenna, M. Hanna, E. Banks, A. Sivachenko, K. Cibulskis, and A. Kernytsky The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data Genome Res 20 2010 1297 1303
    • (2010) Genome Res , vol.20 , pp. 1297-1303
    • McKenna, A.1    Hanna, M.2    Banks, E.3    Sivachenko, A.4    Cibulskis, K.5    Kernytsky, A.6
  • 21
    • 79955483667 scopus 로고    scopus 로고
    • A framework for variation discovery and genotyping using next-generation DNA sequencing data
    • M.A. DePristo, E. Banks, R. Poplin, K.V. Garimella, J.R. Maguire, and C. Hartl A framework for variation discovery and genotyping using next-generation DNA sequencing data Nat Genet 43 2011 491 498
    • (2011) Nat Genet , vol.43 , pp. 491-498
    • Depristo, M.A.1    Banks, E.2    Poplin, R.3    Garimella, K.V.4    Maguire, J.R.5    Hartl, C.6
  • 25
    • 84975795680 scopus 로고    scopus 로고
    • An integrated map of genetic variation from 1,092 human genomes
    • 1000 Genomes Project Consortium
    • 1000 Genomes Project Consortium G.R. Abecasis, A. Auton, L.D. Brooks, M.A. DePristo, and R.M. Durbin An integrated map of genetic variation from 1,092 human genomes Nature 491 2012 56 65
    • (2012) Nature , vol.491 , pp. 56-65
    • Abecasis, G.R.1    Auton, A.2    Brooks, L.D.3    Depristo, M.A.4    Durbin, R.M.5
  • 27
    • 84878878123 scopus 로고    scopus 로고
    • Exome sequencing identifies mutations in the gene TTC7A in French-Canadian cases with hereditary multiple intestinal atresia
    • M.E. Samuels, J. Majewski, N. Alirezaie, I. Fernandez, F. Casals, and N. Patey Exome sequencing identifies mutations in the gene TTC7A in French-Canadian cases with hereditary multiple intestinal atresia J Med Genet 50 2013 324 329
    • (2013) J Med Genet , vol.50 , pp. 324-329
    • Samuels, M.E.1    Majewski, J.2    Alirezaie, N.3    Fernandez, I.4    Casals, F.5    Patey, N.6
  • 28
    • 0037128660 scopus 로고    scopus 로고
    • Two subsets of naive T helper cells with distinct T cell receptor excision circle content in human adult peripheral blood
    • S. Kimmig, G.K. Przybylski, C.A. Schmidt, K. Laurisch, B. Mowes, and A. Radbruch Two subsets of naive T helper cells with distinct T cell receptor excision circle content in human adult peripheral blood J Exp Med 195 2002 789 794
    • (2002) J Exp Med , vol.195 , pp. 789-794
    • Kimmig, S.1    Przybylski, G.K.2    Schmidt, C.A.3    Laurisch, K.4    Mowes, B.5    Radbruch, A.6
  • 29
    • 9144230022 scopus 로고    scopus 로고
    • Donor immune reconstitution after liver-small bowel transplantation for multiple intestinal atresia with immunodeficiency
    • R.K. Gilroy, P.F. Coccia, J.E. Talmadge, L.I. Hatcher, S.J. Pirruccello, and B.W. Shaw Jr. Donor immune reconstitution after liver-small bowel transplantation for multiple intestinal atresia with immunodeficiency Blood 103 2004 1171 1174
    • (2004) Blood , vol.103 , pp. 1171-1174
    • Gilroy, R.K.1    Coccia, P.F.2    Talmadge, J.E.3    Hatcher, L.I.4    Pirruccello, S.J.5    Shaw, Jr.B.W.6
  • 30
    • 0344496513 scopus 로고    scopus 로고
    • The tetratricopeptide repeat: A structural motif mediating protein-protein interactions
    • G.L. Blatch, and M. Lassle The tetratricopeptide repeat: a structural motif mediating protein-protein interactions Bioessays 21 1999 932 939
    • (1999) Bioessays , vol.21 , pp. 932-939
    • Blatch, G.L.1    Lassle, M.2
  • 31
    • 13844280263 scopus 로고    scopus 로고
    • Positional cloning of the Ttc7 gene required for normal iron homeostasis and mutated in hea and fsn anemia mice
    • R.A. White, S.G. McNulty, N.N. Nsumu, L.A. Boydston, B.P. Brewer, and K. Shimizu Positional cloning of the Ttc7 gene required for normal iron homeostasis and mutated in hea and fsn anemia mice Genomics 85 2005 330 337
    • (2005) Genomics , vol.85 , pp. 330-337
    • White, R.A.1    McNulty, S.G.2    Nsumu, N.N.3    Boydston, L.A.4    Brewer, B.P.5    Shimizu, K.6
  • 32
    • 76249090489 scopus 로고    scopus 로고
    • BioGPS: An extensible and customizable portal for querying and organizing gene annotation resources
    • C. Wu, C. Orozco, J. Boyer, M. Leglise, J. Goodale, and S. Batalov BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources Genome Biol 10 2009 R130
    • (2009) Genome Biol , vol.10 , pp. 130
    • Wu, C.1    Orozco, C.2    Boyer, J.3    Leglise, M.4    Goodale, J.5    Batalov, S.6
  • 33
    • 27144512476 scopus 로고    scopus 로고
    • The tetratricopeptide repeat domain 7 gene is mutated in flaky skin mice: A model for psoriasis, autoimmunity, and anemia
    • C. Helms, S. Pelsue, L. Cao, E. Lamb, B. Loffredo, and P. Taillon-Miller The tetratricopeptide repeat domain 7 gene is mutated in flaky skin mice: a model for psoriasis, autoimmunity, and anemia Exp Biol Med 230 2005 659 667
    • (2005) Exp Biol Med , vol.230 , pp. 659-667
    • Helms, C.1    Pelsue, S.2    Cao, L.3    Lamb, E.4    Loffredo, B.5    Taillon-Miller, P.6
  • 35
    • 0031982101 scopus 로고    scopus 로고
    • Lymphadenopathy, elevated serum IgE levels, autoimmunity, and mast cell accumulation in flaky skin mutant mice
    • S.C. Pelsue, P.A. Schweitzer, I.B. Schweitzer, S.W. Christianson, B. Gott, and J.P. Sundberg Lymphadenopathy, elevated serum IgE levels, autoimmunity, and mast cell accumulation in flaky skin mutant mice Eur J Immunol 28 1998 1379 1388
    • (1998) Eur J Immunol , vol.28 , pp. 1379-1388
    • Pelsue, S.C.1    Schweitzer, P.A.2    Schweitzer, I.B.3    Christianson, S.W.4    Gott, B.5    Sundberg, J.P.6
  • 36
    • 23944525586 scopus 로고    scopus 로고
    • Expansion of CD22lo B cells in the spleen of autoimmune-prone flaky skin mice
    • N. Mattsson, E.G. Duzevik, and S.C. Pelsue Expansion of CD22lo B cells in the spleen of autoimmune-prone flaky skin mice Cell Immunol 234 2005 124 132
    • (2005) Cell Immunol , vol.234 , pp. 124-132
    • Mattsson, N.1    Duzevik, E.G.2    Pelsue, S.C.3
  • 37
    • 27944485376 scopus 로고    scopus 로고
    • Age-related loss of bone marrow pre-B- and immature B-lymphocytes in the autoimmune-prone flaky skin mutant mice
    • R. Welner, D.J. Swett, and S.C. Pelsue Age-related loss of bone marrow pre-B- and immature B-lymphocytes in the autoimmune-prone flaky skin mutant mice Autoimmunity 38 2005 399 408
    • (2005) Autoimmunity , vol.38 , pp. 399-408
    • Welner, R.1    Swett, D.J.2    Pelsue, S.C.3
  • 38
    • 4444272284 scopus 로고    scopus 로고
    • Hyperactivation and proliferation of lymphocytes from the spleens of flaky skin (fsn) mutant mice
    • R. Welner, W. Hastings, B.L. Hill, and S.C. Pelsue Hyperactivation and proliferation of lymphocytes from the spleens of flaky skin (fsn) mutant mice Autoimmunity 37 2004 227 235
    • (2004) Autoimmunity , vol.37 , pp. 227-235
    • Welner, R.1    Hastings, W.2    Hill, B.L.3    Pelsue, S.C.4
  • 39
    • 0020785750 scopus 로고
    • Hereditary erythroblastic anaemia in the laboratory mouse
    • K. Shimizu, H. Keino, N. Ogasawara, and K. Esaki Hereditary erythroblastic anaemia in the laboratory mouse Lab Anim 17 1983 198 202
    • (1983) Lab Anim , vol.17 , pp. 198-202
    • Shimizu, K.1    Keino, H.2    Ogasawara, N.3    Esaki, K.4
  • 40
    • 24944524163 scopus 로고    scopus 로고
    • A mutant mouse with severe anemia and skin abnormalities controlled by a new allele of the flaky skin (fsn) locus
    • S. Takabayashi, and H. Katoh A mutant mouse with severe anemia and skin abnormalities controlled by a new allele of the flaky skin (fsn) locus Exp Anim 54 2005 339 347
    • (2005) Exp Anim , vol.54 , pp. 339-347
    • Takabayashi, S.1    Katoh, H.2
  • 41
    • 34247633117 scopus 로고    scopus 로고
    • The novel tetratricopeptide repeat domain 7 mutation, Ttc7fsn-Jic, with deletion of the TPR-2B repeat causes severe flaky skin phenotype
    • S. Takabayashi, S. Iwashita, T. Hirashima, and H. Katoh The novel tetratricopeptide repeat domain 7 mutation, Ttc7fsn-Jic, with deletion of the TPR-2B repeat causes severe flaky skin phenotype Exp Biol Med 232 2007 695 699
    • (2007) Exp Biol Med , vol.232 , pp. 695-699
    • Takabayashi, S.1    Iwashita, S.2    Hirashima, T.3    Katoh, H.4
  • 43
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • H. Li, and R. Durbin Fast and accurate short read alignment with Burrows-Wheeler transform Bioinformatics 25 2009 1754 1760
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 45
    • 77956295988 scopus 로고    scopus 로고
    • The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
    • A. McKenna, M. Hanna, E. Banks, A. Sivachenko, K. Cibulskis, and A. Kernytsky The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data Genome Res 20 2010 1297 1303
    • (2010) Genome Res , vol.20 , pp. 1297-1303
    • McKenna, A.1    Hanna, M.2    Banks, E.3    Sivachenko, A.4    Cibulskis, K.5    Kernytsky, A.6
  • 46
    • 79955483667 scopus 로고    scopus 로고
    • A framework for variation discovery and genotyping using next-generation DNA sequencing data
    • M.A. DePristo, E. Banks, R. Poplin, K.V. Garimella, J.R. Maguire, and C. Hartl A framework for variation discovery and genotyping using next-generation DNA sequencing data Nat Genet 43 2011 491 498
    • (2011) Nat Genet , vol.43 , pp. 491-498
    • Depristo, M.A.1    Banks, E.2    Poplin, R.3    Garimella, K.V.4    Maguire, J.R.5    Hartl, C.6
  • 47
    • 77956534324 scopus 로고    scopus 로고
    • ANNOVAR: Functional annotation of genetic variants from high-throughput sequencing data
    • K. Wang, M. Li, and H. Hakonarson ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data Nucleic Acids Res 38 2010 e164
    • (2010) Nucleic Acids Res , vol.38 , pp. 164
    • Wang, K.1    Li, M.2    Hakonarson, H.3
  • 48
    • 68149165614 scopus 로고    scopus 로고
    • Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
    • P. Kumar, S. Henikoff, and P.C. Ng Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm Nat Protoc 4 2009 1073 1081
    • (2009) Nat Protoc , vol.4 , pp. 1073-1081
    • Kumar, P.1    Henikoff, S.2    Ng, P.C.3
  • 51
    • 13844280263 scopus 로고    scopus 로고
    • Positional cloning of the Ttc7 gene required for normal iron homeostasis and mutated in hea and fsn anemia mice
    • R.A. White, S.G. McNulty, N.N. Nsumu, L.A. Boydston, B.P. Brewer, and K. Shimizu Positional cloning of the Ttc7 gene required for normal iron homeostasis and mutated in hea and fsn anemia mice Genomics 85 2005 330 337
    • (2005) Genomics , vol.85 , pp. 330-337
    • White, R.A.1    McNulty, S.G.2    Nsumu, N.N.3    Boydston, L.A.4    Brewer, B.P.5    Shimizu, K.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.