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Volumn 30, Issue 9, 2013, Pages 2099-2112

The skeletal proteome of the coral acropora millepora: The evolution of calcification by co-option and domain shuffling

Author keywords

biomineralization; calcium carbonate skeleton; evolution; proteomics; scleractinian

Indexed keywords

ACID PROTEIN; ACIDIC SOMP PROTEIN; CALCIUM CARBONATE; CEPHALOTOXIN LIKE PROTEIN; COADHESIN; COLLAGEN TYPE 1 ALPHA 1; CUB DOMAIN CONTAINING PROTEIN; ECTIN; EGF AND LAMININ G DOMAIN CONTAINING PROTEIN; EPIDERMAL GROWTH FACTOR; GLUTAMIC ACID RICH PROTEIN; HEPHAESTIN; HEPHAESTIN LIKE PROTEIN; MAM AND FIBRONECTIN CONTAINING PROTEIN; MATRIX PROTEIN; MEMBRANE PROTEIN; MEPRIN; MUCIN; NEUROGLIAN LIKE PROTEIN; POLYCYSTIC KIDNEY DISEASE 1 RELATED PROTEIN; PROTEOME; PROTOCAHERIN LIKE PROTEIN; PUTATIVE CARBONIC ANHYDRASE; SECRETED ACIDIC PROTEIN 1; SECRETED ACIDIC PROTEIN 2; SKELETAL ASPARTIC ACID RICH PROTEIN 1; SKELETAL ASPARTIC ACID RICH PROTEIN 2; SOM MAM AND LDL RECEPTOR 1 PROTEIN; SOM MAM AND LDL RECEPTOR 2 PROTEIN; THREONINE RICH PROTEIN; UNCLASSIFIED DRUG;

EID: 84883230158     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/mst109     Document Type: Article
Times cited : (142)

References (105)
  • 1
    • 0001689220 scopus 로고
    • A chemical model for the cooperation of sulfates and carboxylates in calcite crystal nucleation: Relevance to biomineralization
    • Addadi L, Moradian J, Shay E, Maroudas NG,Weiner S. 1987. A chemical model for the cooperation of sulfates and carboxylates in calcite crystal nucleation: relevance to biomineralization. Proc Natl Acad Sci USA. 84:2732-2736.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 2732-2736
    • Addadi, L.1    Moradian, J.2    Shay, E.3    Maroudas Ngweiner, S.4
  • 2
    • 79959366169 scopus 로고    scopus 로고
    • Coral calcification, cells to reefs
    • Dubinsky Z, Stambler N, editors Dordrecht (The Netherlands), Springer
    • Allemand D, Tambutté É, Zoccola D, Tambutté S. 2011. Coral calcification, cells to reefs. In: Dubinsky Z, Stambler N, editors. Coral reefs: an ecosystem in transition. Dordrecht (The Netherlands): Springer. p. 119-150.
    • (2011) Coral Reefs: An Ecosystem in Transition , pp. 119-150
    • Allemand, D.1    Tambutté, É.2    Zoccola, D.3    Tambutté, S.4
  • 4
    • 3442896308 scopus 로고    scopus 로고
    • A simple plan-cnidarians and the origins of developmental mechanisms
    • Ball EE, Hayward DC, Saint R, Miller DJ. 2004. A simple plan-cnidarians and the origins of developmental mechanisms. Nat Rev Genet. 5: 567-577.
    • (2004) Nat Rev Genet , vol.5 , pp. 567-577
    • Ball, E.E.1    Hayward, D.C.2    Saint, R.3    Miller, D.J.4
  • 7
    • 0024358833 scopus 로고
    • Drosophila neuroglian: A member of the immunoglobulin superfamily with extensive homology to the vertebrate neural adhesion molecule L1
    • Bieber AJ, Snow PM, Hortsch M, Patel NH, Jacobs JR, Traquina ZR, Schilling J, Goodman CS. 1989. Drosophila neuroglian: a member of the immunoglobulin superfamily with extensive homology to the vertebrate neural adhesion molecule L1. Cell 59:447-460.
    • (1989) Cell , vol.59 , pp. 447-460
    • Bieber, A.J.1    Snow, P.M.2    Hortsch, M.3    Patel, N.H.4    Jacobs, J.R.5    Traquina, Z.R.6    Schilling, J.7    Goodman, C.S.8
  • 8
    • 0001183058 scopus 로고
    • Mobile modules and motifs
    • Bork P. 1992. Mobile modules and motifs. Curr Opin Struct Biol. 2: 413-421.
    • (1992) Curr Opin Struct Biol , vol.2 , pp. 413-421
    • Bork, P.1
  • 11
    • 0141509067 scopus 로고    scopus 로고
    • Anthropogenic carbon and ocean pH
    • Caldeira K, Wickett ME. 2003. Anthropogenic carbon and ocean pH. Nature 425:365.
    • (2003) Nature , vol.425 , pp. 365
    • Caldeira, K.1    Wickett, M.E.2
  • 12
    • 84870722021 scopus 로고    scopus 로고
    • Sensitivity of coral calcification to ocean acidification: A meta-analysis
    • Chan NCS, Connolly SR. 2013. Sensitivity of coral calcification to ocean acidification: a meta-analysis. Glob Change Biol. 19:282-290.
    • (2013) Glob Change Biol , vol.19 , pp. 282-290
    • Chan, N.C.S.1    Connolly, S.R.2
  • 13
    • 7044244165 scopus 로고    scopus 로고
    • Geochemical perspectives on coral mineralization
    • Cohen AL, McConnaughey TA. 2003. Geochemical perspectives on coral mineralization. Rev Mineral Geochem. 54:151-188.
    • (2003) Rev Mineral Geochem , vol.54 , pp. 151-188
    • Cohen, A.L.1    McConnaughey, T.A.2
  • 14
    • 72049109716 scopus 로고    scopus 로고
    • Morphological and compositional changes in the skeletons of new coral recruits reared in acidified seawater: Insights into the biomineralization response to ocean acidification
    • doi:10.1029/2009GC002411
    • Cohen AL, McCorkle DC, De Putron S, Gaetani GA, Rose KA. 2009. Morphological and compositional changes in the skeletons of new coral recruits reared in acidified seawater: insights into the biomineralization response to ocean acidification. Geochem Geophys Geosyst. 10: Q07005, doi:10.1029/ 2009GC002411.
    • (2009) Geochem Geophys Geosyst , vol.10
    • Cohen, A.L.1    McCorkle, D.C.2    De Putron, S.3    Gaetani, G.A.4    Rose, K.A.5
  • 15
    • 0036090367 scopus 로고    scopus 로고
    • Phylogeny of Medusozoa and the evolution of cnidarian life cycles
    • Collins AG. 2002. Phylogeny of Medusozoa and the evolution of cnidarian life cycles. J Evolution Biol. 15:418-432.
    • (2002) J Evolution Biol , vol.15 , pp. 418-432
    • Collins, A.G.1
  • 16
    • 33644600635 scopus 로고    scopus 로고
    • Medusozoan phylogeny and character evolution clarified by new large and small subunit rDNA data and an assessment of the utility of phylogenetic mixture models
    • Collins AG, Schuchert P, Marques AC, Jankowski T, Medina M. 2006. Medusozoan phylogeny and character evolution clarified by new large and small subunit rDNA data and an assessment of the utility of phylogenetic mixture models. Syst Biol. 55:97-115.
    • (2006) Syst Biol , vol.55 , pp. 97-115
    • Collins, A.G.1    Schuchert, P.2    Marques, A.C.3    Jankowski, T.4    Medina, M.5
  • 17
    • 0000925066 scopus 로고
    • Acidic macromolecules associated with the mineral phase of scleractinian coral skeletons
    • Constantz B,Weiner S. 1988. Acidic macromolecules associated with the mineral phase of scleractinian coral skeletons. J Exp Zool. 248: 253-258.
    • (1988) J Exp Zool , vol.248 , pp. 253-258
    • Constantz Bweiner, S.1
  • 18
    • 0033450942 scopus 로고    scopus 로고
    • Compositional diversity of soluble mineralizing matrices in some recent coral skeletons compared to fine-scale growth structures of fibres: Discussion of consequences for biomineralization and diagenesis
    • Cuif J-P, Dauphin Y, Gautret P. 1999. Compositional diversity of soluble mineralizing matrices in some recent coral skeletons compared to fine-scale growth structures of fibres: discussion of consequences for biomineralization and diagenesis. Int J Earth Sci. 88:582-592.
    • (1999) Int J Earth Sci , vol.88 , pp. 582-592
    • Cuif, J.-P.1    Dauphin, Y.2    Gautret, P.3
  • 20
    • 57349114040 scopus 로고    scopus 로고
    • Biomineralization: Elemental and organic influence in carbonate systems
    • Cusack M, Freer A. 2008. Biomineralization: elemental and organic influence in carbonate systems. Chem Rev. 108:4433-4454.
    • (2008) Chem Rev , vol.108 , pp. 4433-4454
    • Cusack, M.1    Freer, A.2
  • 21
    • 0030849302 scopus 로고    scopus 로고
    • Isoelectric properties of the soluble matrices in relation to the chemical composition of some Scleractinian skeletons
    • Dauphin Y, Cuif JP. 1997. Isoelectric properties of the soluble matrices in relation to the chemical composition of some Scleractinian skeletons. Electrophoresis 18:1180-1183.
    • (1997) Electrophoresis , vol.18 , pp. 1180-1183
    • Dauphin, Y.1    Cuif, J.P.2
  • 22
    • 58149250145 scopus 로고    scopus 로고
    • Declining coral calcification on the Great Barrier Reef
    • De'ath G, Lough JM, Fabricius KE, 2009, Declining coral calcification on the Great Barrier Reef. Science, 323, 116-119.
    • (2009) Science , vol.323 , pp. 116-119
    • De'Ath, G.1    Lough, J.M.2    Fabricius, K.E.3
  • 24
    • 0026817136 scopus 로고
    • Reconstructing history with amino acid sequences
    • Doolittle RF. 1992. Reconstructing history with amino acid sequences. Proteome Sci. 1:191-200.
    • (1992) Proteome Sci , vol.1 , pp. 191-200
    • Doolittle, R.F.1
  • 26
    • 0026245404 scopus 로고
    • Common structural motifs in proteins of the extracellular matrix
    • Engel J. 1991. Common structural motifs in proteins of the extracellular matrix. Curr Opin Cell Biol. 3:779-785.
    • (1991) Curr Opin Cell Biol , vol.3 , pp. 779-785
    • Engel, J.1
  • 28
    • 77957017396 scopus 로고    scopus 로고
    • Occurrence and diversity of lipids in modern coral skeletons
    • Farre B, Cuif J-P, Dauphin Y. 2010. Occurrence and diversity of lipids in modern coral skeletons. Zoology 113:250-257.
    • (2010) Zoology , vol.113 , pp. 250-257
    • Farre, B.1    Cuif, J.-P.2    Dauphin, Y.3
  • 30
    • 84865984564 scopus 로고    scopus 로고
    • Sea anemone (Cnidaria, Anthozoa, Actiniaria) toxins: An overview
    • Frazão B, Vasconcelos V, Antunes A. 2012. Sea anemone (Cnidaria, Anthozoa, Actiniaria) toxins: an overview. Mar Drugs. 10:1812-1851.
    • (2012) Mar Drugs , vol.10 , pp. 1812-1851
    • Frazão, B.1    Vasconcelos, V.2    Antunes, A.3
  • 32
    • 0027881022 scopus 로고
    • Effects of bleaching on organic and mineral phases in biogenic carbonates
    • Gaffey SJ, Bronnimann CE. 1993. Effects of bleaching on organic and mineral phases in biogenic carbonates. J Sediment Res. 63: 752-754.
    • (1993) J Sediment Res , vol.63 , pp. 752-754
    • Gaffey, S.J.1    Bronnimann, C.E.2
  • 33
    • 0032429971 scopus 로고    scopus 로고
    • Carbon and carbonate metabolism in coastal aquatic ecosystems
    • Gattuso J-P, Frankignoulle M, Wollast R. 1998. Carbon and carbonate metabolism in coastal aquatic ecosystems. Annu Rev Ecol Syst. 29: 405-434.
    • (1998) Annu Rev Ecol Syst , vol.29 , pp. 405-434
    • Gattuso, J.-P.1    Frankignoulle, M.2    Wollast, R.3
  • 34
    • 65449131601 scopus 로고    scopus 로고
    • Regulation of release of antibacterials from stressed scleractinian corals
    • Geffen Y, Ron EZ, Rosenberg E. 2009. Regulation of release of antibacterials from stressed scleractinian corals. FEMS Microbiol Lett. 295: 103-109.
    • (2009) FEMS Microbiol Lett , vol.295 , pp. 103-109
    • Geffen, Y.1    Ron, E.Z.2    Rosenberg, E.3
  • 35
    • 36149009035 scopus 로고
    • Molecular biology of mineralized tissues with particular reference to bone
    • Glimcher M. 1959. Molecular biology of mineralized tissues with particular reference to bone. Rev Mod Phys. 31:359-393.
    • (1959) Rev Mod Phys , vol.31 , pp. 359-393
    • Glimcher, M.1
  • 36
    • 47949085967 scopus 로고    scopus 로고
    • Antibacterial chemical defenses in Hawaiian corals provide possible protection from disease
    • Gochfeld D, Aeby G. 2008. Antibacterial chemical defenses in Hawaiian corals provide possible protection from disease. Mar Eco Prog Ser. 362:119-128.
    • (2008) Mar Eco Prog ser , vol.362 , pp. 119-128
    • Gochfeld, D.1    Aeby, G.2
  • 37
    • 79960694946 scopus 로고    scopus 로고
    • The skeletal organic matrix from Mediterranean coral Balanophyllia europaea influences calcium carbonate precipitation
    • Goffredo S, Vergni P, Reggi M, Caroselli E, Sparla F, Levy O, Dubinsky Z, Falini G. 2011. The skeletal organic matrix from Mediterranean coral Balanophyllia europaea influences calcium carbonate precipitation. PLoS One 6:e22338.
    • (2011) PLoS One , vol.6
    • Goffredo, S.1    Vergni, P.2    Reggi, M.3    Caroselli, E.4    Sparla, F.5    Levy, O.6    Dubinsky, Z.7    Falini, G.8
  • 38
    • 0016320445 scopus 로고
    • Evidence of a sclerotized collagen from the skeleton of a gorgonian coral
    • Goldberg WM. 1974. Evidence of a sclerotized collagen from the skeleton of a gorgonian coral. Comp Biochem Physiol B Comp Biochem. 49:525-529.
    • (1974) Comp Biochem Physiol B Comp Biochem , vol.49 , pp. 525-529
    • Goldberg, W.M.1
  • 39
    • 0034865299 scopus 로고    scopus 로고
    • Acid polysaccharides in the skeletal matrix and calicoblastic epithelium of the stony coral Mycetophyllia reesi
    • Goldberg WM. 2001. Acid polysaccharides in the skeletal matrix and calicoblastic epithelium of the stony coral Mycetophyllia reesi. Tissue Cell 33:376-387.
    • (2001) Tissue Cell , vol.33 , pp. 376-387
    • Goldberg, W.M.1
  • 41
    • 0033822833 scopus 로고    scopus 로고
    • Identification and localization of lysozyme as a component of eggshell membranes and eggshell matrix
    • Hincke MT, Gautron J, Panheleux M, Garcia-ruiz J, Mckee MD. 2000. Identification and localization of lysozyme as a component of eggshell membranes and eggshell matrix. Matrix Biol. 19: 443-453.
    • (2000) Matrix Biol , vol.19 , pp. 443-453
    • Hincke, M.T.1    Gautron, J.2    Panheleux, M.3    Garcia-Ruiz, J.4    McKee, M.D.5
  • 42
    • 0041564058 scopus 로고    scopus 로고
    • Preservation of organic matter in mound-forming coral skeletons
    • Ingalls AE, Lee C, Druffel ER. 2003. Preservation of organic matter in mound-forming coral skeletons. Geochim Cosmochim Acta. 67: 2827-2841.
    • (2003) Geochim Cosmochim Acta , vol.67 , pp. 2827-2841
    • Ingalls, A.E.1    Lee, C.2    Druffel, E.R.3
  • 43
    • 0002639577 scopus 로고
    • The distribution of carbonic anhydrase in a staghorn coral, Acropora hebes (Dana)
    • Isa Y, Yamazato K. 1984. The distribution of carbonic anhydrase in a staghorn coral, Acropora hebes (Dana). Galaxea 3:25-36.
    • (1984) Galaxea , vol.3 , pp. 25-36
    • Isa, Y.1    Yamazato, K.2
  • 44
    • 26844559000 scopus 로고    scopus 로고
    • Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein
    • Ishihama Y, Oda Y, Tabata T, Sato T, Nagasu T, Rappsilber J, Mann M. 2005. Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein. Mol Cell Proteomics. 4: 1265-1272.
    • (2005) Mol Cell Proteomics , vol.4 , pp. 1265-1272
    • Ishihama, Y.1    Oda, Y.2    Tabata, T.3    Sato, T.4    Nagasu, T.5    Rappsilber, J.6    Mann, M.7
  • 46
    • 66349138035 scopus 로고    scopus 로고
    • Family classification without domain chaining
    • Joseph JM, Durand D. 2009. Family classification without domain chaining. Bioinformatics 25:i45-i53.
    • (2009) Bioinformatics , vol.25
    • Joseph, J.M.1    Durand, D.2
  • 48
    • 0025508964 scopus 로고
    • Collagen in the spicule organic matrix of the gorgonian Leptogorgia virgulata
    • Kingsley RJ, Tsuzaki M, Watabe N, Mechanic GL. 1990. Collagen in the spicule organic matrix of the gorgonian Leptogorgia virgulata. Biol Bull. 179:207-213.
    • (1990) Biol Bull , vol.179 , pp. 207-213
    • Kingsley, R.J.1    Tsuzaki, M.2    Watabe, N.3    Mechanic, G.L.4
  • 49
    • 76249105526 scopus 로고    scopus 로고
    • Coral reefs and ocean acidification
    • Kleypas JA, Yates KK. 2009. Coral reefs and ocean acidification. Oceanography 22:108-117.
    • (2009) Oceanography , vol.22 , pp. 108-117
    • Kleypas, J.A.1    Yates, K.K.2
  • 50
    • 84862017238 scopus 로고    scopus 로고
    • A shortterm in situ CO2 enrichment experiment on Heron Island (GBR)
    • (24 co-authors)
    • Kline DI, Teneva L, Schneider K, et al. (24 co-authors). 2012. A shortterm in situ CO2 enrichment experiment on Heron Island (GBR). Sci Rep. 2:1-9.
    • (2012) Sci Rep , vol.2 , pp. 1-9
    • Kline, D.I.1    Teneva, L.2    Schneider, K.3
  • 52
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli UK. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 53
    • 84865186973 scopus 로고    scopus 로고
    • Multicopper oxidase-1 is a ferroxidase essential for iron homeostasis in Drosophila melanogaster
    • LangM, Braun CL, KanostMR, Gorman MJ. 2012. Multicopper oxidase-1 is a ferroxidase essential for iron homeostasis in Drosophila melanogaster. Proc Natl Acad Sci USA. 109:13337-13342.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 13337-13342
    • Lang, M.1    Braun, C.L.2    Kanost, M.R.3    Gorman, M.J.4
  • 54
    • 27744546111 scopus 로고    scopus 로고
    • Effect of elevated pCO2 on photosynthesis and calcification of corals and interactions with seasonal change in temperature/irradiance and nutrient enrichment
    • Langdon C, Atkinson MJ. 2005. Effect of elevated pCO2 on photosynthesis and calcification of corals and interactions with seasonal change in temperature/irradiance and nutrient enrichment. J Geophys Res. 110:1-16.
    • (2005) J Geophys Res , vol.110 , pp. 1-16
    • Langdon, C.1    Atkinson, M.J.2
  • 55
    • 33746001133 scopus 로고    scopus 로고
    • Proteomic analysis of the acid-soluble organic matrix of the chicken calcified eggshell layer
    • Mann K, Macek B, Olsen JV. 2006. Proteomic analysis of the acid-soluble organic matrix of the chicken calcified eggshell layer. Proteomics 6: 3801-3810.
    • (2006) Proteomics , vol.6 , pp. 3801-3810
    • Mann, K.1    MacEk, B.2    Olsen, J.V.3
  • 56
    • 58149489223 scopus 로고    scopus 로고
    • In-depth, high-accuracy proteomics of sea urchin tooth organic matrix
    • Mann K, Poustka AJ, Mann M. 2008a. In-depth, high-accuracy proteomics of sea urchin tooth organic matrix. Prot Sci. 6:33.
    • (2008) Prot Sci , vol.6 , pp. 33
    • Mann, K.1    Poustka, A.J.2    Mann, M.3
  • 57
    • 51249103572 scopus 로고    scopus 로고
    • The sea urchin (Strongylocentrotus purpuratus) test and spine proteomes
    • Mann K, Poustka AJ, Mann M. 2008b. The sea urchin (Strongylocentrotus purpuratus) test and spine proteomes. Prot Sci. 10:1-10.
    • (2008) Prot Sci , vol.10 , pp. 1-10
    • Mann, K.1    Poustka, A.J.2    Mann, M.3
  • 58
    • 77953573499 scopus 로고    scopus 로고
    • Proteomic analysis of sea urchin (Strongylocentrotus purpuratus) spicule matrix
    • Mann K, Wilt FH, Poustka AJ. 2010. Proteomic analysis of sea urchin (Strongylocentrotus purpuratus) spicule matrix. Prot Sci. 8:1-12.
    • (2010) Prot Sci , vol.8 , pp. 1-12
    • Mann, K.1    Wilt, F.H.2    Poustka, A.J.3
  • 59
    • 84872025590 scopus 로고    scopus 로고
    • The shell-forming proteome of Lottia gigantea reveals both deep conservations and lineage specific novelties
    • Marie B, Jackson DJ, Ramos-Silva P, Zanella-Cléon I, Guichard N, Marin F. 2013. The shell-forming proteome of Lottia gigantea reveals both deep conservations and lineage specific novelties. FEBS J. 280: 214-232.
    • (2013) FEBS J , vol.280 , pp. 214-232
    • Marie, B.1    Jackson, D.J.2    Ramos-Silva, P.3    Zanella-Cléon, I.4    Guichard, N.5    Marin, F.6
  • 61
    • 70149107068 scopus 로고    scopus 로고
    • Evolution of nacre: Biochemistry and proteomics of the shell organic matrix of the cephalopod Nautilus macromphalus
    • Marie B, Marin F, Marie A, Bédouet L, Dubost L, Alcaraz G, Milet C, Luquet G. 2009. Evolution of nacre: biochemistry and proteomics of the shell organic matrix of the cephalopod Nautilus macromphalus. ChemBioChem. 10:1495-1506.
    • (2009) Chem Bio Chem , vol.10 , pp. 1495-1506
    • Marie, B.1    Marin, F.2    Marie, A.3    Bédouet, L.4    Dubost, L.5    Alcaraz, G.6    Milet, C.7    Luquet, G.8
  • 62
    • 79751482063 scopus 로고    scopus 로고
    • Proteomic analysis of the acid-soluble nacre matrix of the bivalve Unio pictorum: Detection of novel carbonic anhydrase and putative protease inhibitor proteins
    • Marie B, Zanella-Cléon I, Le Roy N, Becchi M, Luquet G, Marin F. 2010. Proteomic analysis of the acid-soluble nacre matrix of the bivalve Unio pictorum: detection of novel carbonic anhydrase and putative protease inhibitor proteins. ChemBioChem. 11: 2138-2147.
    • (2010) Chem Bio Chem , vol.11 , pp. 2138-2147
    • Marie, B.1    Zanella-Cléon, I.2    Le Roy, N.3    Becchi, M.4    Luquet, G.5    Marin, F.6
  • 63
    • 0034617147 scopus 로고    scopus 로고
    • Mucins and molluscan calcification. Molecular characterization of mucoperlin, a novel mucin-like protein from the nacreous shell layer of the fan mussel Pinna nobilis (Bivalvia, pteriomorphia)
    • Marin F, Corstjens P, De Gaulejac B, De Vrind-De Jong E, Westbroek P. 2000. Mucins and molluscan calcification. Molecular characterization of mucoperlin, a novel mucin-like protein from the nacreous shell layer of the fan mussel Pinna nobilis (Bivalvia, pteriomorphia). J Biol Chem. 275:20667-20675.
    • (2000) J Biol Chem , vol.275 , pp. 20667-20675
    • Marin, F.1    Corstjens, P.2    De Gaulejac, B.3    De Vrind-De Jong, E.4    Westbroek, P.5
  • 64
    • 84857234192 scopus 로고    scopus 로고
    • The formation and mineralization of mollusk shell
    • Marin F, Le Roy N, Marie B. 2012. The formation and mineralization of mollusk shell. Front Biosci (Schol Ed). 4:1099-1125.
    • (2012) Front Biosci (Schol Ed) , vol.4 , pp. 1099-1125
    • Marin, F.1    Le Roy, N.2    Marie, B.3
  • 66
    • 0034816417 scopus 로고    scopus 로고
    • Large-scale fractionation of molluscan shell matrix
    • Marin F, Pereira L, Westbroek P. 2001. Large-scale fractionation of molluscan shell matrix. Protein Expr Purif. 23:175-179.
    • (2001) Protein Expr Purif , vol.23 , pp. 175-179
    • Marin, F.1    Pereira, L.2    Westbroek, P.3
  • 68
    • 80052099023 scopus 로고    scopus 로고
    • Profiling gene expression responses of coral larvae (Acropora millepora) to elevated temperature and settlement inducers using a novel RNA-Seq procedure
    • Meyer E, Aglyamova GV, Matz MV. 2011. Profiling gene expression responses of coral larvae (Acropora millepora) to elevated temperature and settlement inducers using a novel RNA-Seq procedure. Mol Ecol. 20:3599-3616.
    • (2011) Mol Ecol , vol.20 , pp. 3599-3616
    • Meyer, E.1    Aglyamova, G.V.2    Matz, M.V.3
  • 70
    • 53349146486 scopus 로고    scopus 로고
    • Neritic and pelagic carbonate sedimentation in the marine environment: Ignorance is not bliss
    • Milliman JD, Droxler AW. 1996. Neritic and pelagic carbonate sedimentation in the marine environment: ignorance is not bliss. Geologische Rundschau. 85:496-504.
    • (1996) Geologische Rundschau , vol.85 , pp. 496-504
    • Milliman, J.D.1    Droxler, A.W.2
  • 71
    • 0001085105 scopus 로고
    • Amino acid composition and metal binding capability of the skeletal protein of corals
    • Mitterer RM. 1978. Amino acid composition and metal binding capability of the skeletal protein of corals. Bull Mar Sci. 28:173-180.
    • (1978) Bull Mar Sci , vol.28 , pp. 173-180
    • Mitterer, R.M.1
  • 73
    • 0019800463 scopus 로고
    • Silver stain for proteins in polyacrylamide gels: A modified procedure with enhanced uniform sensitivity
    • Morrissey JH. 1981. Silver stain for proteins in polyacrylamide gels: a modified procedure with enhanced uniform sensitivity. Anal Biochem. 117:307-310.
    • (1981) Anal Biochem , vol.117 , pp. 307-310
    • Morrissey, J.H.1
  • 74
    • 84857791001 scopus 로고    scopus 로고
    • Adhesion-modulating/matricellular ECM protein families: A structural, functional and evolutionary appraisal
    • Mosher DF, Adams JC. 2012. Adhesion-modulating/matricellular ECM protein families: a structural, functional and evolutionary appraisal. Matrix Biol. 31:1-7.
    • (2012) Matrix Biol , vol.31 , pp. 1-7
    • Mosher, D.F.1    Adams, J.C.2
  • 75
    • 84860528360 scopus 로고    scopus 로고
    • Whole transcriptome analysis of the coral Acropora millepora reveals complex responses to CO(2)-driven acidification during the initiation of calcification
    • Moya A, Huisman L, Ball EE, Hayward DC, Grasso LC, Chua CM, Woo HN, Gattuso J.-P, Forêt S, Miller DJ. 2012. Whole transcriptome analysis of the coral Acropora millepora reveals complex responses to CO(2)-driven acidification during the initiation of calcification. Mol Ecol. 21:2440-2454.
    • (2012) Mol Ecol , vol.21 , pp. 2440-2454
    • Moya, A.1    Huisman, L.2    Ball, E.E.3    Hayward, D.C.4    Grasso, L.C.5    Chua, C.M.6    Woo, H.N.7    Gattuso, J.-P.8    Forêt, S.9    Miller, D.J.10
  • 76
    • 54449084714 scopus 로고    scopus 로고
    • Carbonic anhydrase in the scleractinian coral Stylophora pistillata: Characterization, localization, and role in biomineralization
    • Moya A, Tambutté S, Bertucci A, Tambutté E, Lotto S, Vullo D, Supuran CT, Allemand D, Zoccola D. 2008. Carbonic anhydrase in the scleractinian coral Stylophora pistillata: characterization, localization, and role in biomineralization. J Biol Chem. 283:25475-25484.
    • (2008) J Biol Chem , vol.283 , pp. 25475-25484
    • Moya, A.1    Tambutté, S.2    Bertucci, A.3    Tambutté, E.4    Lotto, S.5    Vullo, D.6    Supuran, C.T.7    Allemand, D.8    Zoccola, D.9
  • 77
    • 26944481617 scopus 로고    scopus 로고
    • Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms
    • (28 co-authors)
    • Orr JC, Fabry VJ, Aumont O, et al. (28 co-authors). 2005. Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms. Nature 437:681-686.
    • (2005) Nature , vol.437 , pp. 681-686
    • Orr, J.C.1    Fabry, V.J.2    Aumont, O.3
  • 78
    • 79960673580 scopus 로고    scopus 로고
    • Projecting coral reef futures under global warming and ocean acidification
    • Pandolfi JM, Connolly SR, Marshall DJ, Cohen AL. 2011. Projecting coral reef futures under global warming and ocean acidification. Science 333:418-422.
    • (2011) Science , vol.333 , pp. 418-422
    • Pandolfi, J.M.1    Connolly, S.R.2    Marshall, D.J.3    Cohen, A.L.4
  • 79
    • 84877021734 scopus 로고    scopus 로고
    • Computational workflow for analysis of gain and loss of genes in distantly related genomes
    • Ptitsyn A, Moroz LL. 2012. Computational workflow for analysis of gain and loss of genes in distantly related genomes. BMC Bioinformatics 13(1 Suppl):S5.
    • (2012) BMC Bioinformatics , vol.13 , Issue.1 SUPPL.
    • Ptitsyn, A.1    Moroz, L.L.2
  • 81
    • 20444369565 scopus 로고    scopus 로고
    • Characterization of proteins from thematrix of spicules from the alcyonarian, Lobophytum crassum
    • Rahman MA, Isa Y. 2005. Characterization of proteins from thematrix of spicules from the alcyonarian, Lobophytum crassum. J ExpMar Biol Ecol. 321:71-82.
    • (2005) J ExpMar Biol Ecol , vol.321 , pp. 71-82
    • Rahman, M.A.1    Isa, Y.2
  • 82
    • 33645277822 scopus 로고    scopus 로고
    • Analysis of proteinaceous components of the organic matrix of endoskeletal sclerites from the alcyonarian Lobophytum crassum
    • Rahman MA, Isa Y, Takemura A, Uehara T. 2006. Analysis of proteinaceous components of the organic matrix of endoskeletal sclerites from the alcyonarian Lobophytum crassum. Calcif Tissue Int. 78: 178-185.
    • (2006) Calcif Tissue Int , vol.78 , pp. 178-185
    • Rahman, M.A.1    Isa, Y.2    Takemura, A.3    Uehara, T.4
  • 83
    • 16344373766 scopus 로고    scopus 로고
    • Proteins of calcified endoskeleton: II partial amino acid sequences of endoskeletal proteins and the characterization of proteinaceous organic matrix of spicules from the alcyonarian, Synularia polydactyla
    • Rahman MA, Isa Y, Uehara T. 2005. Proteins of calcified endoskeleton: II partial amino acid sequences of endoskeletal proteins and the characterization of proteinaceous organic matrix of spicules from the alcyonarian, Synularia polydactyla. Proteomics 5:885-893.
    • (2005) Proteomics , vol.5 , pp. 885-893
    • Rahman, M.A.1    Isa, Y.2    Uehara, T.3
  • 84
    • 33747135029 scopus 로고    scopus 로고
    • Studies on two closely related species of octocorallians: Biochemical and molecular characteristics of the organic matrices of endoskeletal sclerites
    • Rahman MA, Isa Y, Uehara T. 2006. Studies on two closely related species of octocorallians: biochemical and molecular characteristics of the organic matrices of endoskeletal sclerites. Mar Biotechnol (NY). 8:415-424.
    • (2006) Mar Biotechnol (NY) , vol.8 , pp. 415-424
    • Rahman, M.A.1    Isa, Y.2    Uehara, T.3
  • 85
    • 84860234420 scopus 로고    scopus 로고
    • Novel molluskan biomineralization proteins retrieved from proteomics: A case study with Upsalin
    • (11 co-authors)
    • Ramos-Silva P, Benhamada S, Le Roy N, et al. (11 co-authors). 2012. Novel molluskan biomineralization proteins retrieved from proteomics: a case study with Upsalin. ChemBioChem. 13:1067-1078.
    • (2012) Chem Bio Chem , vol.13 , pp. 1067-1078
    • Ramos-Silva, P.1    Benhamada, S.2    Le Roy, N.3
  • 86
    • 84878994835 scopus 로고    scopus 로고
    • Biomineralization toolkit: The importance of sample cleaning prior to the characterization of biomineral proteomes
    • Ramos-Silva P, Marin F, Kaandorp J, Marie B. 2013. Biomineralization toolkit: The importance of sample cleaning prior to the characterization of biomineral proteomes. Proc Natl Acad Sci USA. 110: E2144-E2146.
    • (2013) Proc Natl Acad Sci USA , vol.110
    • Ramos-Silva, P.1    Marin, F.2    Kaandorp, J.3    Marie, B.4
  • 87
    • 68849113485 scopus 로고    scopus 로고
    • Differential expression of three galaxin-related genes during settlement and metamorphosis in the scleractinian coral Acropora millepora
    • Reyes-Bermudez A, Lin Z, Hayward DC, Miller DJ, Ball EE. 2009. Differential expression of three galaxin-related genes during settlement and metamorphosis in the scleractinian coral Acropora millepora. BMC Evol Biol. 9:178.
    • (2009) BMC Evol Biol , vol.9 , pp. 178
    • Reyes-Bermudez, A.1    Lin, Z.2    Hayward, D.C.3    Miller, D.J.4    Ball, E.E.5
  • 88
    • 80051936630 scopus 로고    scopus 로고
    • Using the Acropora digitifera genome to understand coral responses to environmental change
    • (13 co-authors)
    • Shinzato C, Shoguchi E, Kawashima T, et al. (13 co-authors). 2011. Using the Acropora digitifera genome to understand coral responses to environmental change. Nature 476:320-323.
    • (2011) Nature , vol.476 , pp. 320-323
    • Shinzato, C.1    Shoguchi, E.2    Kawashima, T.3
  • 89
    • 44949207428 scopus 로고    scopus 로고
    • Sequence similarity network reveals common ancestry of multidomain proteins
    • Song N, Joseph JM, Davis GB, Durand D. 2008. Sequence similarity network reveals common ancestry of multidomain proteins. PLoS Comput Biol. 4:e1000063.
    • (2008) PLoS Comput Biol , vol.4
    • Song, N.1    Joseph, J.M.2    Davis, G.B.3    Durand, D.4
  • 91
    • 62849099943 scopus 로고    scopus 로고
    • Identification and gene expression analysis of a taxonomically restricted cysteine-rich protein family in reef-building corals
    • Sunagawa S, DeSalvo MK, Voolstra CR, Reyes-Bermudez A, Medina M. 2009. Identification and gene expression analysis of a taxonomically restricted cysteine-rich protein family in reef-building corals. PLoS One 4:e4865.
    • (2009) PLoS One , vol.4
    • Sunagawa, S.1    Desalvo, M.K.2    Voolstra, C.R.3    Reyes-Bermudez, A.4    Medina, M.5
  • 94
    • 33847379045 scopus 로고    scopus 로고
    • Characterization and role of carbonic anhydrase in the calcification process of the azooxanthellate coral Tubastrea aurea
    • Tambutté S, Tambutté E, Zoccola D, Caminiti N, Lotto S, Moya A, Allemand D, Adkins J. 2006. Characterization and role of carbonic anhydrase in the calcification process of the azooxanthellate coral Tubastrea aurea. Mar Biol. 151:71-83.
    • (2006) Mar Biol , vol.151 , pp. 71-83
    • Tambutté, S.1    Tambutté, E.2    Zoccola, D.3    Caminiti, N.4    Lotto, S.5    Moya, A.6    Allemand, D.7    Adkins, J.8
  • 95
    • 50949129142 scopus 로고    scopus 로고
    • Purification and molecular cloning of SE-cephalotoxin, a novel proteinaceous toxin from the posterior salivary gland of cuttlefish Sepia esculenta
    • Ueda A, Nagai H, Ishida M, Nagashima Y, Shiomi K. 2008. Purification and molecular cloning of SE-cephalotoxin, a novel proteinaceous toxin from the posterior salivary gland of cuttlefish Sepia esculenta. Toxicon 52:574-581.
    • (2008) Toxicon , vol.52 , pp. 574-581
    • Ueda, A.1    Nagai, H.2    Ishida, M.3    Nagashima, Y.4    Shiomi, K.5
  • 96
    • 0034941931 scopus 로고    scopus 로고
    • The evolutionary history of the coral genus Acropora (Scleractinia, Cnidaria) based on a mitochondrial and a nuclear marker: Reticulation, incomplete lineage sorting, or morphological convergence?
    • Van Oppen MJ, McDonald BJ,Willis B, Miller DJ. 2001. The evolutionary history of the coral genus Acropora (Scleractinia, Cnidaria) based on a mitochondrial and a nuclear marker: reticulation, incomplete lineage sorting, or morphological convergence? Mol Biol Evol. 18: 1315-1329.
    • (2001) Mol Biol Evol , vol.18 , pp. 1315-1329
    • Van Oppen, M.J.1    McDonald, B.J.2    Willis, B.3    Miller, D.J.4
  • 97
    • 79959535132 scopus 로고    scopus 로고
    • Organic matrix-related mineralization of sea urchin spicules, spines, test and teeth
    • Veis A. 2011. Organic matrix-related mineralization of sea urchin spicules, spines, test and teeth. Front Biosci. 16:2540.
    • (2011) Front Biosci , vol.16 , pp. 2540
    • Veis, A.1
  • 98
    • 0001838183 scopus 로고
    • The collagen of mineralized matrices
    • Peck WA editor New York (NY): Elsevier Science
    • Veis A, Sabsay B. 1987. The collagen of mineralized matrices. In: Peck WA, editor. Bone and mineral research, Vol. 5. New York (NY): Elsevier Science. p. 15.
    • (1987) Bone and Mineral Research , vol.5 , pp. 15
    • Veis, A.1    Sabsay, B.2
  • 100
    • 37049188359 scopus 로고
    • Control of calcium carbonate nucleation and crystal growth by soluble matrx of oyster shell
    • Wheeler AP, George JW, Evans CA. 1981. Control of calcium carbonate nucleation and crystal growth by soluble matrx of oyster shell. Science 212:1397-1398.
    • (1981) Science , vol.212 , pp. 1397-1398
    • Wheeler, A.P.1    George, J.W.2    Evans, C.A.3
  • 101
    • 0000127608 scopus 로고
    • Shell formation
    • Wilbur K, Saleuddin AS, editors Physiology, Part 1. New York: Academic Press
    • Wilbur K, Saleuddin AS. 1983. Shell formation. In: Wilbur K, Saleuddin AS, editors. The Mollusca. Vol. 4. Physiology, Part 1. New York: Academic Press. p. 235-287.
    • (1983) The Mollusca , vol.4 , pp. 235-287
    • Wilbur, K.1    Saleuddin, A.S.2
  • 102
    • 0001514262 scopus 로고
    • Statistics of local complexity in amino acid sequences and sequence databases
    • Wootton JC, Federhen S. 1993. Statistics of local complexity in amino acid sequences and sequence databases. Computers Chem. 17: 149-163.
    • (1993) Computers Chem , vol.17 , pp. 149-163
    • Wootton, J.C.1    Federhen, S.2
  • 103
    • 84867088834 scopus 로고    scopus 로고
    • The oyster genome reveals stress adaptation and complexity of shell formation
    • (85 co-authors)
    • Zhang G, Fang X, Guo X, et al. (85 co-authors). 2012. The oyster genome reveals stress adaptation and complexity of shell formation. Nature 490:49-54.
    • (2012) Nature , vol.490 , pp. 49-54
    • Zhang, G.1    Fang, X.2    Guo, X.3


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