Variation in meiotic recombination frequencies between allelic transgenes inserted at different sites in the drosophila melanogaster genome

G3: Genes, Genomes, Genetics

Volumn 3, Issue 8, 2013, Pages 1419-1427

  McMahan, Susan ^a   Kohl, Kathryn P ^a   Sekelsky, Jeff ^a  

^a UNIVERSITY OF NORTH CAROLINA   (United States)

Author keywords

Drosophila; Meiotic; Recombination

Indexed keywords

PURINE; PURINE DERIVATIVE;

ALLELE; ANIMAL; ANIMAL EXPERIMENT; ARTICLE; CHROMOSOME; CHROMOSOME 4; CHROMOSOME ARM; CONTROLLED STUDY; CROSSING OVER; DROSOPHILA; DROSOPHILA MELANOGASTER; DRUG EFFECT; EUCHROMATIN; FEMALE; GENE CONVERSION; GENE FREQUENCY; GENE INSERTION; GENETIC POLYMORPHISM; GENETIC RECOMBINATION; GENETIC VARIABILITY; GENETICS; GENOME; MALE; MEIOSIS; MEIOTIC RECOMBINATION; METABOLISM; NONHUMAN; TRANSGENE; X CHROMOSOME;

DROSOPHILA MELANOGASTER;

DROSOPHILA; MEIOTIC RECOMBINATION;

ALLELES; ANIMALS; CHROMOSOMES; CROSSING OVER, GENETIC; DROSOPHILA MELANOGASTER; EUCHROMATIN; FEMALE; GENOME; MALE; MEIOSIS; POLYMORPHISM, GENETIC; PURINES; RECOMBINATION, GENETIC; TRANSGENES; X CHROMOSOME;

EID: 84883217439     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.113.006411     Document Type: Article

References (43)

1. Andersen, S. L., and J. Sekelsky, 2010 Meiotic vs. mitotic recombination: two different routes for double-strand break repair: the different functions of meiotic vs. mitotic DSB repair are reflected in different pathway usage and different outcomes. Bioessays 32: 1058-1066.
2. Aplin, A. C., and T. C. Kaufman, 1997 Homeotic transformation of legs to mouthparts by proboscipedia expression in Drosophila imaginal discs. Mech. Dev. 62: 51-60.
3. Barolo, S., L. A. Carver, and J.W. Posakony, 2000 GFP and beta-galactosidase transformation vectors for promoter/enhancer analysis in Drosophila. Biotechniques 29: 726-732.
4. Beadle, G. W., 1932 A possible influence of the spindle fibre on crossingover in Drosophila. Proc. Natl. Acad. Sci. USA 18: 160-165.
5. Bhalla, N., and A. F. Dernburg, 2008 Prelude to a division. Annu. Rev. Cell Dev. Biol. 24: 397-424.
6. Bischof, J., R. K. Maeda, M. Hediger, F. Karch, and K. Basler, 2007 An optimized transgenesis system for Drosophila using germ-line2specific fC31 integrases. Proc. Natl. Acad. Sci. USA 104: 3312-3317.
7. Blanton, H. L., S. J. Radford, S. McMahan, H. M. Kearney, J. G. Ibrahim et al., 2005 REC, Drosophila MCM8, drives formation of meiotic crossovers. PLoS Genet. 1: 343-353.
8. Buard, J., P. Barthes, C. Grey, and B. de Massy, 2009 Distinct histone modifications define initiation and repair of meiotic recombination in the mouse. EMBO J. 28: 2616-2624.
9. Chambers, S. P., S. E. Prior, D. A. Barstow, and N. P. Minton, 1988 The pMTL nic- cloning vectors. I. Improved pUC polylinker regions to facilitate the use of sonicated DNA for nucleotide sequencing. Gene 68: 139-149.
10. Chovnick, A., W. M. Gelbart, M. Y. McCarron, and J. Pandey, 1993 Studies on recombination in higher organisms, pp. 351-364 in Mechanisms in Recombination, edited by R. F. Grell. Plenum Publishing Corporation, New York.
11. Cirulli, E. T., R. M. Kliman, and M. A. Noor, 2007 Fine-scale crossover rate heterogeneity in Drosophila pseudoobscura. J. Mol. Evol. 64: 129-135.
12. Comeron, J. M., R. Ratnappan, and S. Bailin, 2012 The many landscapes of recombination in Drosophila melanogaster. PLoS Genet. 8: e1002905.
13. Coté, B., W. Bender, D. Curtis, and A. Chovnick, 1986 Molecular mapping of the rosy locus in Drosophila melanogaster. Genetics 112: 769-783.
14. Dobzhansky, T., 1930 Translocations involving the third and the fourth chromosomes of Drosophila melanogaster. Genetics 15: 347-399.
15. Finnerty, V. G., P. Duck, and A. Chovnick, 1970 Studies on genetic organization in higher organisms. II. Complementation and fine structure of the maroon-like locus of Drosophila melanogaster. Proc. Natl. Acad. Sci. USA 65: 939-946.
16. Gelbart, W. M., M. Y. McCarron, and A. Chovnick, 1976 Extension of the limits of the XDH structural element in Drosophila melanogaster. Genetics 84: 211-232.
17. Green, M. M., 1955 Phenotypic variation and pseudo-allelism at the forked locus in Drosophila melanogaster. Proc. Natl. Acad. Sci. USA 41: 375-379.
18. Hille, R., 1996 The mononuclear molybdenum enzymes. Chem. Rev. 96: 2757-2816.
19. Koehler, K. E., C. L. Boulton, H. E. Collins, R. L. French, K. C. Herman et al., 1996 Spontaneous X chromosome MI and MII nondisjunction events in Drosophila melanogaster oocytes have different recombinational histories. Nat. Genet. 14: 406-414.
20. Lamb, N. E., S. B. Freeman, A. Savage-Austin, D. Pettay, L. Taft et al., 1996 Susceptible chiasmate configurations of chromosome 21 predispose to non-disjunction in both maternal meiosis I and meiosis II. Nat. Genet. 14: 400-405.
21. Lindsley, D. L., and G. G. Zimm, 1992 The Genome of Drosophila melanogaster. Academic Press, Inc., San Diego, CA.
22. Maeda, R. K., and F. Karch, 2007 Making connections: boundaries and insulators in Drosophila. Curr. Opin. Genet. Dev. 17: 394-399.
23. Martinez-Perez, E., and M. P. Colaiácovo, 2009 Distribution of meiotic recombination events: talking to your neighbors. Curr. Opin. Genet. Dev. 19: 105-112.
24. Miller, D. E., S. Takeo, K. Nandanan, A. Paulson, M. M. Gogol et al., 2012 A whole-chromosome analysis of meiotic recombination in Drosophila melanogaster. G3 (Bethesda) 2: 249-260.
25. Moens, P. B., N. K. Kolas, M. Tarsounas, E. Marcon, P. E. Cohen et al., 2002 The time course and chromosomal localization of recombinationrelated proteins at meiosis in the mouse are compatible with models that can resolve the early DNA-DNA interactions without reciprocal recombination. J. Cell Sci. 115: 1611-1622.
26. Muller, H. J., 1927 Artificial transmutation of the gene. Science 46: 84-87.
27. Otto, S. P., and T. Lenormand, 2002 Resolving the paradox of sex and recombination. Nat. Rev. Genet. 3: 252-261.
28. Painter, T. S., and H. J. Muller, 1929 Parallel cytology and genetics of induced translocations and deletions in Drosophila. J. Hered. 20: 287-298.
29. Phadnis, N., R. W. Hyppa, and G. R. Smith, 2011 New and old ways to control meiotic recombination. Trends Genet. 27: 411-421.
30. Plough, H. H., 1917 The effect of temperature on linkage in the second chromosome of Drosophila. Proc. Natl. Acad. Sci. USA 3: 553-555.
31. Radford, S. J., S. McMahan, H. L. Blanton, and J. Sekelsky, 2007 Heteroduplex DNA in meiotic recombination in Drosophila mei-9 mutants. Genetics 176: 63-72.
32. Radford, S. J., M. M. Sabourin, S. McMahan, and J. Sekelsky, 2007 Meiotic recombination in Drosophila Msh6 mutants yields discontinuous gene conversion tracts. Genetics 176: 53-62.
33. Rørth, P., K. Szabo, A. Bailey, T. Laverty, J. Rehm et al., 1998 Systematic gain-of-function genetics in Drosophila. Development 125: 1049-1057.
34. Rubin, G. M., and A. C. Spradling, 1982 Genetic transformation of Drosophila with transposable element vectors. Science 218: 348-353.
35. Singh, N. D., C. F. Aquadro, and A. G. Clark, 2009 Estimation of fine-scale recombination intensity variation in the white-echinus interval of D. melanogaster. J. Mol. Evol. 69: 42-53.
36. Singh, N. D., E. A. Stone, C. F. Aquadro, and A. G. Clark, 2013 Fine-scale heterogeneity in crossover rate in the garnet-scalloped region of the Drosophila melanogaster X chromosome. Genetics 194: 375-387.
37. Smith, P. D., V. G. Finnerty, and A. Chovnick, 1970 Gene conversion in Drosophila: Non-reciprocal events at the maroon-like cistron. Nature 228: 442-444.
38. Starz-Gaiano, M., N. K. Cho, A. Forbes, and R. Lehmann, 2001 Spatially restricted activity of a Drosophila lipid phosphatase guides migrating germ cells. Development 128: 983-991.
39. Sturtevant, A. H., 1913 The linear arrangement of six sex-linked factors in Drosophila, as shown by their mode of association. J. Exp. Biol. 14: 43-59.
40. Sturtevant, A. H., and G. W. Beadle, 1936 The relations of inversions in the X chromosome of Drosophila melanogaster to crossing over and disjunction. Genetics 21: 554-604.
41. Venken, K. J., J. W. Carlson, K. L. Schulze, H. Pan, Y. He et al., 2009 Versatile P[acman] BAC libraries for transgenesis studies in Drosophila melanogaster. Nat. Methods 6: 431-434.
42. Wu, T. C., and M. Lichten, 1994 Meiosis-induced double-strand break sites determined by yeast chromatin structure. Science 263: 515-518.
43. Youds, J. L., and S. J. Boulton, 2011 The choice in meiosis - defining the factors that influence crossover or non-crossover formation. J. Cell Sci. 124: 501-513.