-
1
-
-
0034977045
-
Linkage disequilibrium in humans: Models and data
-
Pritchard JK, Przeworski M (2001) Linkage disequilibrium in humans: Models and data. Am J Hum Genet 69:1-14
-
(2001)
Am J Hum Genet
, vol.69
, pp. 1-14
-
-
Pritchard, J.K.1
Przeworski, M.2
-
2
-
-
0032006925
-
Linkage disequilibrium in a two-locus model
-
Luo ZW (1998) Linkage disequilibrium in a two-locus model. Heredity 80:198-208
-
(1998)
Heredity
, vol.80
, pp. 198-208
-
-
Luo, Z.W.1
-
3
-
-
0028151261
-
Empirical threshold values for quantitative trait mapping
-
Churchill GA, Doerge RW (1994) Empirical threshold values for quantitative trait mapping. Genetics 138:963-971
-
(1994)
Genetics
, vol.138
, pp. 963-971
-
-
Churchill, G.A.1
Doerge, R.W.2
-
4
-
-
42249087793
-
Estimation of significance thresholds for genomewide association scans
-
Dudbridge F, Gusnanto A (2008) Estimation of significance thresholds for genomewide association scans. Genet Epidemiol 32:2227-2234
-
(2008)
Genet Epidemiol
, vol.32
, pp. 2227-2234
-
-
Dudbridge, F.1
Gusnanto, A.2
-
5
-
-
1642381468
-
Controlling the proportion of false positives in multiple dependent tests
-
Fernando RL, Nettleton D, Southey BR, Dekkers JCM, Rothschild MF et al (2004) Controlling the proportion of false positives in multiple dependent tests. Genetics 166:611-619
-
(2004)
Genetics
, vol.166
, pp. 611-619
-
-
Fernando, R.L.1
Nettleton, D.2
Southey, B.R.3
Dekkers, J.C.M.4
Rothschild, M.F.5
-
6
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J R Stat Soc Ser B 57(1):289-300
-
(1995)
J R Stat Soc Ser B
, vol.57
, Issue.1
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
7
-
-
3743109290
-
A new approach to the problem of multiple comparisons in the genetic dissection of complex traits
-
Weller JI, Song JZ, Heyen DW, Lewin HA, RonM(1998) A new approach to the problem of multiple comparisons in the genetic dissection of complex traits. Genetics 150:1699-1706
-
(1998)
Genetics
, vol.150
, pp. 1699-1706
-
-
Weller, J.I.1
Song, J.Z.2
Heyen, D.W.3
Lewin, H.A.4
Ron, M.5
-
8
-
-
0036020892
-
A direct approach to false discovery rates
-
Storey JD (2002) A direct approach to false discovery rates. J R Stat Soc Ser B 64:479-498
-
(2002)
J R Stat Soc Ser B
, vol.64
, pp. 479-498
-
-
Storey, J.D.1
-
9
-
-
79953212964
-
Polymorphic regions affecting human height also control stature in cattle
-
Pryce JE, Hayes BJ, Bolormaa S, Goddard ME (2011) Polymorphic regions affecting human height also control stature in cattle. Genetics 187(3):981-984
-
(2011)
Genetics
, vol.187
, Issue.3
, pp. 981-984
-
-
Pryce, J.E.1
Hayes, B.J.2
Bolormaa, S.3
Goddard, M.E.4
-
11
-
-
0027377799
-
Transmission test for linkage disequilibrium: The insulin gene region and insulin-dependent diabetes mellitus (IDDM)
-
Spielman RS, McGinnis RE, Ewens WJ (1993) Transmission test for linkage disequilibrium: The insulin gene region and insulin-dependent diabetes mellitus (IDDM). Am J Hum Genet 52:506-513
-
(1993)
Am J Hum Genet
, vol.52
, pp. 506-513
-
-
Spielman, R.S.1
McGinnis, R.E.2
Ewens, W.J.3
-
12
-
-
77951959874
-
Power of a genome scan to detect and locate quantitative trait loci in cattle using dense single nucleotide polymorphisms
-
MacLeod IM, Hayes BJ, Savin KW, Chamberlain AJ, McPartlan HC, Goddard ME (2010) Power of a genome scan to detect and locate quantitative trait loci in cattle using dense single nucleotide polymorphisms. J Anim Breed Genet 127(2):133-142
-
(2010)
J Anim Breed Genet
, vol.127
, Issue.2
, pp. 133-142
-
-
MacLeod, I.M.1
Hayes, B.J.2
Savin, K.W.3
Chamberlain, A.J.4
McPartlan, H.C.5
Goddard, M.E.6
-
13
-
-
52649102962
-
Technical note: Prediction of breeding values using marker-derived relationship matrices
-
Hayes BJ, Goddard ME (2008) Technical note: Prediction of breeding values using marker-derived relationship matrices. J Anim Sci 86(9):2089-2092
-
(2008)
J Anim Sci
, vol.86
, Issue.9
, pp. 2089-2092
-
-
Hayes, B.J.1
Goddard, M.E.2
-
15
-
-
73349108482
-
A genealogical interpretation of principal components analysis
-
McVean G (2009) A genealogical interpretation of principal components analysis. PLoS Genet 5(10):e1000686
-
(2009)
PLoS Genet
, vol.5
, Issue.10
-
-
McVean, G.1
-
16
-
-
84882667360
-
Components of the accuracy of genomic prediction in a multi-breed sheep population
-
May 14 [Epub ahead of print]
-
Daetwyler HD, Kemper KE, van der Werf JH, Hayes BJ (2012) Components of the accuracy of genomic prediction in a multi-breed sheep population. J Anim Sci 2012 May 14 [Epub ahead of print]
-
(2012)
J Anim Sci 2012
-
-
Daetwyler, H.D.1
Kemper, K.E.2
Van Der Werf, J.H.3
Hayes, B.J.4
-
17
-
-
84857654213
-
-
Gilmour AR, Gogel BJ, Cullis BR, Welham SJ, Thompson R (2006) ASReml user guide release 2.0. VSN International, Hemel Hempstead, UK
-
(2006)
ASReml user guide release 2.0. VSN International, Hemel Hempstead, UK
-
-
Gilmour, A.R.1
Gogel, B.J.2
Cullis, B.R.3
Welham, S.J.4
Thompson, R.5
-
18
-
-
77953895118
-
A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypes
-
Pryce JE, Bolormaa S, Chamberlain AJ, Bowman PJ, Savin K, Goddard ME, Hayes BJ (2010) A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypes. J Dairy Sci 93(7):3331-3345
-
(2010)
J Dairy Sci
, vol.93
, Issue.7
, pp. 3331-3345
-
-
Pryce, J.E.1
Bolormaa, S.2
Chamberlain, A.J.3
Bowman, P.J.4
Savin, K.5
Goddard, M.E.6
Hayes, B.J.7
-
19
-
-
0035543447
-
Prediction of identity by descent probabilities from marker-haplotypes
-
Meuwissen THE, Goddard ME (2001) Prediction of identity by descent probabilities from marker-haplotypes. Genet Sel Evol 33:605-634
-
(2001)
Genet Sel Evol
, vol.33
, pp. 605-634
-
-
Meuwissen, T.H.E.1
Goddard, M.E.2
-
21
-
-
33645229679
-
-
Grapes L, Firat MZ, Dekkers JC, Rothschild MF, Fernando RL (2006) Genetics 172:1955
-
(2006)
Genetics
, vol.172
, pp. 1955
-
-
Grapes, L.1
Firat, M.Z.2
Dekkers, J.C.3
Rothschild, M.F.4
Fernando, R.L.5
-
22
-
-
34248993659
-
Power and precision of alternate methods for linkage disequilibrium mapping of quantitative trait loci
-
27
-
Zhao HH, Fernando RL, Dekkers JCM (2007) Power and precision of alternate methods for linkage disequilibrium mapping of quantitative trait loci. Genetics 175(1975-1986):27
-
(2007)
Genetics
, vol.175
, pp. 1975-1986
-
-
Zhao, H.H.1
Fernando, R.L.2
Dekkers, J.C.M.3
-
23
-
-
36849015576
-
Accuracy of marker assisted selection with single markers and marker haplotypes in cattle
-
Hayes BJ, Chamberlain AC, McPartlan H, McLeod I, Sethuraman L, Goddard ME (2007) Accuracy of marker assisted selection with single markers and marker haplotypes in cattle. Genet Res 89:215-220
-
(2007)
Genet Res
, vol.89
, pp. 215-220
-
-
Hayes, B.J.1
Chamberlain, A.C.2
McPartlan, H.3
McLeod, I.4
Sethuraman, L.5
Goddard, M.E.6
-
24
-
-
36849093104
-
Accuracy of genomic selection using different methods to define haplotypes
-
Calus MP, Meuwissen TH, de Roos AP, Veerkamp RF (2008) Accuracy of genomic selection using different methods to define haplotypes. Genetics 178(1):553-561
-
(2008)
Genetics
, vol.178
, Issue.1
, pp. 553-561
-
-
Calus, M.P.1
Meuwissen, T.H.2
De Roos, A.P.3
Veerkamp, R.F.4
-
25
-
-
84859588748
-
Detecting rare variant associations by identity-bydescent mapping in case-control studies
-
Browning SR, Thompson EA (2012) Detecting rare variant associations by identity-bydescent mapping in case-control studies. Genetics 190(4):1521-1531
-
(2012)
Genetics
, vol.190
, Issue.4
, pp. 1521-1531
-
-
Browning, S.R.1
Thompson, E.A.2
-
26
-
-
84862832570
-
Conditional and joint multiple-SNP analysis of GWAS summary statistics identifies additional variants influencing complex traits
-
Genetic Investigation of ANthropometric Traits (GIANT) Consortium, DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium, Madden PA, Heath AC, Martin NG, Montgomery GW, Weedon MN, Loos RJ, Frayling TM, McCarthy MI, Hirschhorn JN, Goddard ME, Visscher P.M. S1-3
-
Yang J, Ferreira T, Morris AP, Medland SE, Genetic Investigation of ANthropometric Traits (GIANT) Consortium, DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium, Madden PA, Heath AC, Martin NG, Montgomery GW, Weedon MN, Loos RJ, Frayling TM, McCarthy MI, Hirschhorn JN, Goddard ME, Visscher PM (2012) Conditional and joint multiple-SNP analysis of GWAS summary statistics identifies additional variants influencing complex traits. Nat Genet 44(4):369-375, S1-3
-
(2012)
Nat Genet
, vol.44
, Issue.4
, pp. 369-375
-
-
Yang, J.1
Ferreira, T.2
Morris, A.P.3
Medland, S.E.4
-
27
-
-
0035045051
-
Prediction of total genetic value using genome-wide dense marker maps
-
Meuwissen THE, Hayes B, Goddard ME (2001) Prediction of total genetic value using genome-wide dense marker maps. Genetics 157:1819-182933
-
(2001)
Genetics
, vol.157
, pp. 1819-182933
-
-
Meuwissen, T.H.E.1
Hayes, B.2
Goddard, M.E.3
-
28
-
-
75649126894
-
Accuracy of genomic selection using stochastic search variable selection in australian holstein friesian dairy cattle
-
Verbyla KL, Hayes BJ, Bowman PJ, Goddard ME (2009) Accuracy of genomic selection using stochastic search variable selection in Australian Holstein Friesian dairy cattle. Genet Res (Camb) 91(5):307-311
-
(2009)
Genet Res (Camb
, vol.91
, Issue.5
, pp. 307-311
-
-
Verbyla, K.L.1
Hayes, B.J.2
Bowman, P.J.3
Goddard, M.E.4
-
30
-
-
84858955361
-
Simultaneous QTL detection and genomic breeding value estimation using high density SNP chips
-
Veerkamp RF, Verbyla KL, Mulder HA, Calus MP (2010) Simultaneous QTL detection and genomic breeding value estimation using high density SNP chips. BMC Proc 4(Suppl 1):S9
-
(2010)
BMC Proc
, vol.4
, Issue.SUPPL.1
-
-
Veerkamp, R.F.1
Verbyla, K.L.2
Mulder, H.A.3
Calus, M.P.4
-
31
-
-
84882663585
-
Bayesian genome wide association analyses of growth and yearling ultrasound measures of carcass traits in Brangus heifers
-
Jun 4. [Epub ahead of print]
-
Peters SO, Kizilkaya K, Garrick DJ, Fernando RL, Reecy JM, Weaber RL, Silver GA, Thomas MG (2012) Bayesian genome wide association analyses of growth and yearling ultrasound measures of carcass traits in Brangus heifers. J Anim Sci 2012 Jun 4. [Epub ahead of print]
-
(2012)
J Anim Sci 2012
-
-
Peters, S.O.1
Kizilkaya, K.2
Garrick, D.J.3
Fernando, R.L.4
Reecy, J.M.5
Weaber, R.L.6
Silver, G.A.7
Thomas, M.G.8
-
32
-
-
84863334651
-
Genomic breeding value prediction and QTL mapping of QTLMAS2011 data using Bayesian and GBLUP methods
-
Zeng J, Pszczola M, Wolc A, Strabel T, Fernando RL, Garrick DJ, Dekkers JC (2012) Genomic breeding value prediction and QTL mapping of QTLMAS2011 data using Bayesian and GBLUP methods. BMC Proc 6(Suppl 2):S7
-
(2012)
BMC Proc
, vol.6
, Issue.SUPPL.2
-
-
Zeng, J.1
Pszczola, M.2
Wolc, A.3
Strabel, T.4
Fernando, R.L.5
Garrick, D.J.6
Dekkers, J.C.7
-
33
-
-
84871924353
-
Whole genome analysis of infectious bovine keratoconjunctivitis in Angus cattle using Bayesian threshold models
-
Kizilkaya K, Tait RG, Garrick DJ, Fernando RL, Reecy JM (2011) Whole genome analysis of infectious bovine keratoconjunctivitis in Angus cattle using Bayesian threshold models. BMC Proc 5(Suppl 4):S22
-
(2011)
BMC Proc
, vol.5
, Issue.SUPPL.4
-
-
Kizilkaya, K.1
Tait, R.G.2
Garrick, D.J.3
Fernando, R.L.4
Reecy, J.M.5
-
34
-
-
80052652158
-
Genomic breeding value prediction and QTL mapping of QTLMAS2010 data using Bayesian methods
-
Sun X, Habier D, Fernando RL, Garrick DJ, Dekkers JC (2011) Genomic breeding value prediction and QTL mapping of QTLMAS2010 data using Bayesian methods. BMC Proc 5(Suppl 3):S13
-
(2011)
BMC Proc
, vol.5
, Issue.SUPPL.3
-
-
Sun, X.1
Habier, D.2
Fernando, R.L.3
Garrick, D.J.4
Dekkers, J.C.5
-
35
-
-
84862511727
-
Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels
-
Erbe M, Hayes BJ, Matukumalli LK, Goswami S, Bowman PJ, Reich CM, Mason BA, Goddard ME (2012) Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels. J Dairy Sci 95 (7):4114-4129
-
(2012)
J Dairy Sci
, vol.95
, Issue.7
, pp. 4114-4129
-
-
Erbe, M.1
Hayes, B.J.2
Matukumalli, L.K.3
Goswami, S.4
Bowman, P.J.5
Reich, C.M.6
Mason, B.A.7
Goddard, M.E.8
-
36
-
-
2442597278
-
Mapping multiple QTL using linkage disequilibrium and linkage analysis information and multitrait data
-
Meuwissen TH, Goddard ME (2004) Mapping multiple QTL using linkage disequilibrium and linkage analysis information and multitrait data. Genet Sel Evol 36(3):261-279
-
(2004)
Genet Sel Evol
, vol.36
, Issue.3
, pp. 261-279
-
-
Meuwissen, T.H.1
Goddard, M.E.2
-
37
-
-
33646226097
-
Linkage disequilibrium in finite populations
-
Hill WG, Robertson A (1968) Linkage disequilibrium in finite populations. Theor Appl Genet 38:226-231
-
(1968)
Theor Appl Genet
, vol.38
, pp. 226-231
-
-
Hill, W.G.1
Robertson, A.2
-
38
-
-
42649092874
-
Identification of ten loci associated with height highlights new biological pathways in human growth
-
Lettre G, Jackson AU, Gieger C, Schumacher FR, Berndt SI et al (2008) Identification of ten loci associated with height highlights new biological pathways in human growth. Nat Genet 40:584-591
-
(2008)
Nat Genet
, vol.40
, pp. 584-591
-
-
Lettre, G.1
Jackson, A.U.2
Gieger, C.3
Schumacher, F.R.4
Berndt, S.I.5
-
39
-
-
42649118126
-
Many sequence variants affecting diversity of adult human height
-
Gudbjartsson DF,Walters GB, Thorleifsson G, Stefansson H, Halldorsson BV et al (2008) Many sequence variants affecting diversity of adult human height. Nat Genet 40:609-615
-
(2008)
Nat Genet
, vol.40
, pp. 609-615
-
-
Gudbjartsson, D.F.1
Walters, G.B.2
Thorleifsson, G.3
Stefansson, H.4
Halldorsson, B.V.5
-
40
-
-
79953227664
-
Genome wide association study identifies 20 loci that influence human height
-
Weedon MN, Lango H, Lindgren CM,Wallace C, Evans DM et al (2008) Genome wide association study identifies 20 loci that influence human height. Nat Genet 39:1245-1250
-
(2008)
Nat Genet
, vol.39
, pp. 1245-1250
-
-
Weedon, M.N.1
Lango, H.2
Lindgren, C.M.3
Wallace, C.4
Evans, D.M.5
-
41
-
-
76149144003
-
Identification of 15 loci influencing height in a Korean population
-
Kim J-J, Lee H-I, Park T, Kim K, Lee J-E et al (2010) Identification of 15 loci influencing height in a Korean population. J Hum Genet 55:27-31
-
(2010)
J Hum Genet
, vol.55
, pp. 27-31
-
-
Kim, J.-J.1
Lee, H.-I.2
Park, T.3
Kim, K.4
Lee, J.-E.5
-
42
-
-
34147165220
-
Recent human effective population size estimated from linkage disequilibrium
-
Tenesa A, Navarro P, Hayes BJ, Duffy DL, Clarke GM et al (2007) Recent human effective population size estimated from linkage disequilibrium. Genome Res 17:520-526
-
(2007)
Genome Res
, vol.17
, pp. 520-526
-
-
Tenesa, A.1
Navarro, P.2
Hayes, B.J.3
Duffy, D.L.4
Clarke, G.M.5
-
43
-
-
65449132092
-
Genomewide survey of SNP variation uncovers the genetic structure of cattle breeds
-
Bovine Hapmap Consortium.
-
Bovine Hapmap Consortium (2009) Genomewide survey of SNP variation uncovers the genetic structure of cattle breeds. Science 24:528-532
-
(2009)
Science
, vol.24
, pp. 528-532
-
-
|