Analysis of dormant bud (Banjhi) specific transcriptome of tea (Camellia sinensis (L.) O. Kuntze) from cDNA library revealed dormancy-related genes

Applied Biochemistry and Biotechnology

Volumn 169, Issue 4, 2013, Pages 1405-1417

  Thirugnanasambantham, Krishnaraj ^a   Prabu, Gajjeraman ^a,b   Palanisamy, Senthilkumar ^a   Chandrabose, Suresh Ramraj Subhas ^a   Mandal, Abul Kalam Azad ^a,c  

^a UPASI Tea Research Foundation   (India)

^b KARPAGAM UNIVERSITY   (India)

^c VIT UNIVERSITY   (India)

Author keywords

Banjhi; Bud; cDNA; Dormancy. Library; Tea; Transcriptome

Indexed keywords

BANJHI; BUD; CDNA; TEA; TRANSCRIPTOMES;

CELL SIGNALING; GENE EXPRESSION;

GENE EXPRESSION REGULATION;

COMPLEMENTARY DNA; TRANSCRIPTOME;

ARTICLE; BUD DORMANCY; CAMELLIA SINENSIS; CELL CYCLE; CELL DIFFERENTIATION; DNA LIBRARY; DORMANCY; EXPRESSED SEQUENCE TAG; GENE EXPRESSION; GENE ONTOLOGY; GROWTH REGULATION; LIFE CYCLE; NONHUMAN; PLANT GENE; PLANT GENETICS; PLANT GROWTH; PLANT METABOLISM; TEA; TROPISM; GENE LIBRARY; GENETICS;

CAMELLIA SINENSIS;

CAMELLIA SINENSIS; GENE LIBRARY; TRANSCRIPTOME;

EID: 84883037323     PISSN: 02732289     EISSN: 15590291     Source Type: Journal    
DOI: 10.1007/s12010-012-0070-5     Document Type: Article

References (54)

1. Thirugnanasambantham, K., Prabu, G., Senthilkumar, P., Suresh Ramraj, S., & Mandal, A. K. A. (2011). Plant Physiology and Biochemistry, 49, 565-571.
2. Paul, A., & Kumar, S. (2011). Functional & Integrative Genomics, 11, 659-664.
3. Nakayme, A., & Harada, S. (1960). Tea Research Journal, 16, 1-5.
4. Horvath, D. P., Soto-Suarez, M., Chao, W. S., Jia, Y., & Anderson, J. V. (2005). Weed Science, 53, 795-801.
5. Rohde, A., Ruttink, T., Hostyn, V., Sterck, L., Driessche, K. V., & Boerjan, W. (2007). Journal of Experimental Botany, 58, 4047-4060.
6. Horvath, D. P., Chao,W. S., Suttle, J. C., Thimmapuram, J., & Anderson, J. V. (2008). BMC Genomics, 9, 536.
7. Balasaravanan, T., Pius, P. K., Rajkumar, R., Muraleedharan, N., & Shasany, A. K. (2003). Plant Science, 165, 365-372.
8. Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W., & Lipman, D. J. S. F. (1997). Nucleic Acids Research, 25, 3389-3402.
9. Conesa, A., & Gotz, S. (2008). International Journal of Plant Genome, 2008, 1-13.
10. Satyanarayana, N., Cox, S., & Sharma, V. S. (1992). Journal of Plantation Crops, 20, 151-156.
11. Cox, S., Raj Kumar, R., & Gunasundari, R. (2000). In N. Muraleedharan & R. Rajkumar (Eds.), Recent Advances in Plantation Crops Research (pp. 125-129). New Delhi: Allied Publishers Pvt. Ltd.
12. Dekkers, B. J. W., Schuurmans, J. M. M. J., & Smeekens, S. C. M. (2008). Plant Molecular Biology, 67, 151-167.
13. Rolland, F., Baena-Gonzalez, E., & Sheen, J. (2006). Annual Review of Plant Biology, 57, 675-709.
14. Dijkwel, P. P., Huijser, C., Weisbeek, P. J., Chua, N. H., & Smeekens, S. C. M. (1997). The Plant Cell, 9, 583-595.
15. Matthews, R., & Stephens, W. (2006). Experimental Agriculture, 34, 345-367.
16. Bi, Y. D., Wei, Z. G., Shen, Z., Lu, T. C., Cheng, Y. X., Wang, B. C., & Yang, C. P. (2011). Molecular Biology Report, 38, 721-729.
17. Genschik, P., Criqui, M. C., Parmentier, Y., Derevier, A., & Fleck, J. (1998). The Plant Cell, 10, 2063-2075.
18. Jennifer, M., Geraint, P., & Mark, E. (2004). The Plant Cell, 16, 3181-3195.
19. Hershko, A., & Ciechanover, A. (1998). Annual Review of Biochemistry, 67, 425-479.
20. Pagano, M. (1997). The FASEB Journal, 11, 1067-1075.
21. Xia, C., Bao, Z., Tabassam, F., Ma, W., Qiu, M., Hua, S., & Liu, M. (2000). The Journal of Biological Chemistry, 275, 20942-20948.
22. Barroco, R. M., Poucke, K. V., Bergervoet, J. H.W., Veylder, L. D., Groot, S. P. C., Inze, D., & Engler, G. (2005). Plant Physiology, 137, 127-140.
23. Cans, C., Passer, B. J., Shalak, V., Nancy-Portebois, V., Crible, V., Amzallag, V., Allanic, D., Tufino, R., Argentini, M., Moras, D., Fiucci, G., Goud, B., Mirande, M., Amson, R., & Telerman, A. (2003). Proceedings of the National Academy of Sciences USA, 100, 13892-13897.
24. Gachet, Y., Tournier, S., Lee, M., Laris-Karatzas, A., Poulton, T., & Bommer, U. A. (1999). Journal of Cell Science, 112, 1257-1271.
25. Maas, N. L., Miller, K. M., DeFazio, L. G., & Toczyski, D. P. (2006). Molecular Cell, 23, 109-119.
26. Singh, K., Kumar, S., & Ahuja, P. S. (2009). Molecular Biology Reports, 36, 537-542.
27. Ma, Q. (2007). Journal of Plant Growth Regulation, 26, 369-388.
28. Engel, M., Seifert, M., Theisinger, B., & Seyfert, U. (1998). The Journal of Biological Chemistry, 273, 20058-20065.
29. Johansson, M., Hammargren, J., Uppsall, E., Mackenzie, A., & Knorpp, C. (2008). Plant Science, 174, 192-199.
30. Dai, Y., Wang, H. Z., Li, B. H., Huang, J., Liu, X. F., Zhou, Y. H., Mou, Z. L., & Li, J. Y. (2006). The Plant Cell, 18, 308-320.
31. Chaboute, M. E., Clement, B., Sekine, M., Philipps, G., & Gigot, N. C. (2000). The Plant Cell, 12, 1987-1999.
32. Lazar, G., & Goodman, H. M. (2006). Proceedings of the National Academy of Sciences U S A, 103, 472-476.
33. Thomas, T., & Thomas, T. J. (2001). Cellular and Molecular Life Sciences, 58, 244-258.
34. Shi, J., Gonzales, R. A., & Bhattacharyya, M. K. (1996). The Journal of Biological Chemistry, 271, 9384-9389.
35. Pastori, G. M., & Foyer, C. H. (2002). American Society of Plant Biologists, 129, 460-468.
36. Hedley, P. E., Russell, J. R., Jorgensen, L., Gordon, S., Morris, J. A., Hackett, C. A., Cardle, L., & Brennan, R. (2010). BMC Plant Biology, 10, 202.
37. Baier, M., & Dietz, K. J. (1997). The Plant Journal, 12, 179-190.
38. Meyer, Y., Reichheld, J. P., & Vignols, F. (2005). Photosynthesis Research, 86, 419-433.
39. Carles, C., Bies-Etheve, N., Aspart, L., Leon-Kloosterziel, K. M., Koornneef, M., Echeverria, M., & Delseny, M. (2002). The Plant Journal, 30, 373-383.
40. Schrader, J., Moyle, R., Bhalerao, R., Hertzberg, M., Lundeberg, J., Nilsson, P., & Bhalerao, R. P. (2004). The Plant Journal, 40, 173-187.
41. Jimenez, S., Reighard, G. L., & Bielenberg, D. G. (2010). Plant Molecular Biology, 73, 157-167.
42. Ruttink, T., Arend, M., Morreel, K., Storme, V., Rombauts, S., Fromm, J., Bhalero, R. P., Boerjan, W., & Rohde, A. (2007). The Plant Cell, 19, 2370-2390.
43. Hoson, T., & Masuda, Y. (1995). Plant & Cell Physiology, 36, 517-523.
44. Park, S., Keathley, D. E., & Han, K. H. (2008). Tree Physiology, 28, 321-329.
45. Mathiason, K., He, D., Grimplet, J., Venkateswari, J., Galbraith, D., Or, E., & Fennell, A. (2009). Functional & Integrative Genomics, 9, 81-96.
46. Mira, H., Martinez-Garcia, F., & Penarrubia, L. (2001). The Plant Journal, 25, 521-528.
47. Zheng-Jun, X., Masatoshi, N., Yoshihito, S., & Isomaro, Y. (2002). Plant Physiology, 129, 1285-1295.
48. Meza-Zepeda, L. A., Baudo, M. M., Palva, E. T., & Heino, P. (1998). Journal of Experimental Botany, 49, 1451-1452.
49. Anderson, J. V., Chao, W. S., & Horvath, D. P. (2001). Weed Science, 49, 581-589.
50. Uno, Y., Furihata, T., Abe, H., Yoshida, R., Shinozaki, K., & Shinozaki, K. Y. (2000). Proceedings of the National Academy of Sciences U S A, 97, 1632-11637.
51. Tsukagoshi, H., Saijo, T., Shibata, D., Morikami, A., & Nakamura, K. (2005). Plant Physiology, 138, 675-685.
52. Kasai, T., Inoue, M., Koshiba, S., Yabuki, T., Aoki, M., Nunokawa, E., Seki, E., Matsuda, T., Matsuda, N., Tomo, Y., Shirouzu, M., Terada, T., Obayashi, N., Hamana, H., Shinya, N., Tatsuguchi, A., Yasuds, S., Yoshida, M., Hirota, H., Matsuo, Y., Tani, K., Suzuki, H., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kigawa, T., & Yokoyama, S. (2004). Protein Science, 13, 545-548.
53. Stafstrom, J. P., Ripley, B. D., Devitt, M. L., & Drake, B. (1998). Planta, 205, 547-552.
54. Horvath, D. P., Anderson, J. V., Chao, W. S., & Foley, M. E. (2003). Trends in Plant Science, 8, 534-540.