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Volumn 5, Issue 3, 2013, Pages 251-257

Comparison of four DNA extraction methods for detecting Mycobacterium tuberculosis by real-time PCR and its clinical application in pulmonary tuberculosis

Author keywords

Mycobacterium tuberculosis (MTB); Plasma DNA; Pulmonary tuberculosis; Quantitative fluorescent PCR

Indexed keywords

CHLOROFORM; PHENOL;

EID: 84881515101     PISSN: 20721439     EISSN: 20776624     Source Type: Journal    
DOI: 10.3978/j.issn.2072-1439.2013.05.08     Document Type: Article
Times cited : (16)

References (32)
  • 2
    • 33747724593 scopus 로고    scopus 로고
    • Tuberculosis associated with Mycobacterium tuberculosis Beijing and non-Beijing genotypes: a clinical and immunological comparison
    • Sun YJ, Lim TK, Ong AK, et al. Tuberculosis associated with Mycobacterium tuberculosis Beijing and non-Beijing genotypes: a clinical and immunological comparison. BMC Infect Dis 2006;6:105.
    • (2006) BMC Infect Dis , vol.6 , pp. 105
    • Sun, Y.J.1    Lim, T.K.2    Ong, A.K.3
  • 3
    • 70349966253 scopus 로고    scopus 로고
    • Transmission of specific genotype streptomycin resistant strains of Mycobacterium tuberculosis in the Tokyo Metropolitan Area in Japan
    • Ohkado A, Murase Y, Mori M, et al. Transmission of specific genotype streptomycin resistant strains of Mycobacterium tuberculosis in the Tokyo Metropolitan Area in Japan. BMC Infect Dis 2009;9:138.
    • (2009) BMC Infect Dis , vol.9 , pp. 138
    • Ohkado, A.1    Murase, Y.2    Mori, M.3
  • 5
    • 3042784242 scopus 로고    scopus 로고
    • A review of tuberculosis: reflections on the past, present and future of a global epidemic disease
    • Smith KC, Armitige L, Wanger A. A review of tuberculosis: reflections on the past, present and future of a global epidemic disease. Expert Rev Anti Infect Ther 2003;1:483-91.
    • (2003) Expert Rev Anti Infect Ther , vol.1 , pp. 483-491
    • Smith, K.C.1    Armitige, L.2    Wanger, A.3
  • 6
    • 59049106901 scopus 로고    scopus 로고
    • Molecular epidemiology and evolutionary genetics of Mycobacterium tuberculosis in Taipei
    • Dou HY, Tseng FC, Lin CW, et al. Molecular epidemiology and evolutionary genetics of Mycobacterium tuberculosis in Taipei. BMC Infect Dis 2008;8:170.
    • (2008) BMC Infect Dis , vol.8 , pp. 170
    • Dou, H.Y.1    Tseng, F.C.2    Lin, C.W.3
  • 7
    • 84873680927 scopus 로고    scopus 로고
    • Advances in the treatment of pulmonary tuberculosis
    • Zhang X, Guo J. Advances in the treatment of pulmonary tuberculosis. J Thorac Dis 2012;4:617-23.
    • (2012) J Thorac Dis , vol.4 , pp. 617-623
    • Zhang, X.1    Guo, J.2
  • 8
    • 50349092855 scopus 로고    scopus 로고
    • Epidemiological analysis of pulmonary tuberculosis in Sichuan Province, China, 2000-2006
    • Yang XY, Zhang NM, Diao X, et al. Epidemiological analysis of pulmonary tuberculosis in Sichuan Province, China, 2000-2006. Int J Infect Dis 2008;12:534-41.
    • (2008) Int J Infect Dis , vol.12 , pp. 534-541
    • Yang, X.Y.1    Zhang, N.M.2    Diao, X.3
  • 9
    • 0030908033 scopus 로고    scopus 로고
    • Relevance of nucleic acid amplification techniques for diagnosis of respiratory tract infections in the clinical laboratory
    • Ieven M, Goossens H. Relevance of nucleic acid amplification techniques for diagnosis of respiratory tract infections in the clinical laboratory. Clin Microbiol Rev 1997;10:242-56.
    • (1997) Clin Microbiol Rev , vol.10 , pp. 242-256
    • Ieven, M.1    Goossens, H.2
  • 10
    • 0035046885 scopus 로고    scopus 로고
    • Molecular diagnosis of mycobacteria
    • Soini H, Musser JM. Molecular diagnosis of mycobacteria. Clin Chem 2001;47:809-14.
    • (2001) Clin Chem , vol.47 , pp. 809-814
    • Soini, H.1    Musser, J.M.2
  • 11
    • 77953687376 scopus 로고    scopus 로고
    • Identification of Mycobacterium tuberculosis clinical isolates in Bangladesh by a species distinguishable multiplex PCR
    • Nakajima C, Rahim Z, Fukushima Y, et al. Identification of Mycobacterium tuberculosis clinical isolates in Bangladesh by a species distinguishable multiplex PCR. BMC Infect Dis 2010 ;10:118.
    • (2010) BMC Infect Dis , vol.10 , pp. 118
    • Nakajima, C.1    Rahim, Z.2    Fukushima, Y.3
  • 12
    • 0028825880 scopus 로고
    • Amplification of Mycobacterium tuberculosis from peripheral blood
    • Rolfs A, Beige J, Finckh U, et al. Amplification of Mycobacterium tuberculosis from peripheral blood. J Clin Microbiol 1995;33:3312-4.
    • (1995) J Clin Microbiol , vol.33 , pp. 3312-3314
    • Rolfs, A.1    Beige, J.2    Finckh, U.3
  • 13
    • 0025275474 scopus 로고
    • Polymerase chain reaction amplification of a repetitive DNA sequence specific for Mycobacterium tuberculosis
    • Eisenach KD, Cave MD, Bates JH, et al. Polymerase chain reaction amplification of a repetitive DNA sequence specific for Mycobacterium tuberculosis. J Infect Dis 1990;161:977-81.
    • (1990) J Infect Dis , vol.161 , pp. 977-981
    • Eisenach, K.D.1    Cave, M.D.2    Bates, J.H.3
  • 14
    • 0031697159 scopus 로고    scopus 로고
    • Use of real-time quantitative PCR to compare DNA isolation methods
    • De Kok JB, Hendriks JC, Van Solinge WW, et al. Use of real-time quantitative PCR to compare DNA isolation methods. Clin Chem 1998;44:2201-4.
    • (1998) Clin Chem , vol.44 , pp. 2201-2204
    • De Kok, J.B.1    Hendriks, J.C.2    Van Solinge, W.W.3
  • 15
    • 77957754755 scopus 로고    scopus 로고
    • Time and spatial distribution of multidrugresistant tuberculosis among Chinese people, 1981-2006: a systematic review
    • Yang XY, Li YP, Mei YW, et al. Time and spatial distribution of multidrugresistant tuberculosis among Chinese people, 1981-2006: a systematic review. Int J Infect Dis 2010;14:e828-37.
    • (2010) Int J Infect Dis , vol.14
    • Yang, X.Y.1    Li, Y.P.2    Mei, Y.W.3
  • 16
    • 77049083451 scopus 로고    scopus 로고
    • Diagnosis of drug-resistant tuberculosis: reliability and rapidity of detection
    • Van Deun A, Martin A, Palomino JC. Diagnosis of drug-resistant tuberculosis: reliability and rapidity of detection. Int J Tuberc Lung Dis 2010;14:131-40.
    • (2010) Int J Tuberc Lung Dis , vol.14 , pp. 131-140
    • Van Deun, A.1    Martin, A.2    Palomino, J.C.3
  • 17
    • 71549114522 scopus 로고    scopus 로고
    • Novel and improved technologies for tuberculosis diagnosis: progress and challenges
    • viii
    • Pai M, Minion J, Sohn H, et al. Novel and improved technologies for tuberculosis diagnosis: progress and challenges. Clin Chest Med 2009;30:701-16, viii.
    • (2009) Clin Chest Med , vol.30 , pp. 701-716
    • Pai, M.1    Minion, J.2    Sohn, H.3
  • 18
    • 27244452883 scopus 로고    scopus 로고
    • A commercial line probe assay for the rapid detection of rifampicin resistance in Mycobacterium tuberculosis: a systematic review and meta-analysis
    • Morgan M, Kalantri S, Flores L, et al. A commercial line probe assay for the rapid detection of rifampicin resistance in Mycobacterium tuberculosis: a systematic review and meta-analysis. BMC Infect Dis 2005;5:62.
    • (2005) BMC Infect Dis , vol.5 , pp. 62
    • Morgan, M.1    Kalantri, S.2    Flores, L.3
  • 19
    • 79952695625 scopus 로고    scopus 로고
    • Evaluation of real-time polymerase chain reaction, interferon-gamma, adenosine deaminase, and immunoglobulin A for the efficient diagnosis of pleural tuberculosis
    • Kalantri Y, Hemvani N, Chitnis DS. Evaluation of real-time polymerase chain reaction, interferon-gamma, adenosine deaminase, and immunoglobulin A for the efficient diagnosis of pleural tuberculosis. Int J Infect Dis 2011;15:e226-31.
    • (2011) Int J Infect Dis , vol.15
    • Kalantri, Y.1    Hemvani, N.2    Chitnis, D.S.3
  • 20
    • 66149110262 scopus 로고    scopus 로고
    • Rapid Identification of Mycobacterium tuberculosis and nontuberculous mycobacteria by multiplex, real-time PCR
    • Richardson ET, Samson D, Banaei N. Rapid Identification of Mycobacterium tuberculosis and nontuberculous mycobacteria by multiplex, real-time PCR. J Clin Microbiol 2009;47:1497-502.
    • (2009) J Clin Microbiol , vol.47 , pp. 1497-1502
    • Richardson, E.T.1    Samson, D.2    Banaei, N.3
  • 21
    • 34548179071 scopus 로고    scopus 로고
    • Combined use of Amplified Fragment Length Polymorphism and IS6110-RFLP in fingerprinting clinical isolates of Mycobacterium tuberculosis from Kerala, South India
    • Krishnan MY, Radhakrishnan I, Joseph BV, et al. Combined use of Amplified Fragment Length Polymorphism and IS6110-RFLP in fingerprinting clinical isolates of Mycobacterium tuberculosis from Kerala, South India. BMC Infect Dis 2007;7:86.
    • (2007) BMC Infect Dis , vol.7 , pp. 86
    • Krishnan, M.Y.1    Radhakrishnan, I.2    Joseph, B.V.3
  • 23
    • 0034568385 scopus 로고    scopus 로고
    • Circulating DNA in plasma or serum
    • Anker P, Stroun M. Circulating DNA in plasma or serum. Medicina (B Aires) 2000;60:699-702.
    • (2000) Medicina (B Aires) , vol.60 , pp. 699-702
    • Anker, P.1    Stroun, M.2
  • 24
    • 61349121505 scopus 로고    scopus 로고
    • Cell-free tumor DNA in blood plasma as a marker for circulating tumor cells in prostate cancer
    • Schwarzenbach H, Alix-Panabières C, Müller I, et al. Cell-free tumor DNA in blood plasma as a marker for circulating tumor cells in prostate cancer. Clin Cancer Res 2009;15:1032-8.
    • (2009) Clin Cancer Res , vol.15 , pp. 1032-1038
    • Schwarzenbach, H.1    Alix-Panabières, C.2    Müller, I.3
  • 25
    • 64149125626 scopus 로고    scopus 로고
    • Profile of the circulating DNA in apparently healthy individuals
    • Beck J, Urnovitz HB, Riggert J, et al. Profile of the circulating DNA in apparently healthy individuals. Clin Chem 2009;55:730-8.
    • (2009) Clin Chem , vol.55 , pp. 730-738
    • Beck, J.1    Urnovitz, H.B.2    Riggert, J.3
  • 26
  • 27
    • 77950834989 scopus 로고    scopus 로고
    • Detection and identification of mycobacteria in sputum from suspected tuberculosis patients
    • Hatta M, Sultan AR, Tandirogang N, et al. Detection and identification of mycobacteria in sputum from suspected tuberculosis patients. BMC Res Notes 2010;3:72.
    • (2010) BMC Res Notes , vol.3 , pp. 72
    • Hatta, M.1    Sultan, A.R.2    Tandirogang, N.3
  • 28
    • 0033730660 scopus 로고    scopus 로고
    • Efficacy of Amplicor PCR for the diagnosis of tuberculosis in respiratory specimens other than sputum
    • Shibuya Y, Shiozaki T, Hayashi M, et al. Efficacy of Amplicor PCR for the diagnosis of tuberculosis in respiratory specimens other than sputum. Tuber Lung Dis 2000;80:209-15.
    • (2000) Tuber Lung Dis , vol.80 , pp. 209-215
    • Shibuya, Y.1    Shiozaki, T.2    Hayashi, M.3
  • 29
    • 71949097207 scopus 로고    scopus 로고
    • Relationship of circulating cell-free DNA levels to cell-free fetal DNA levels, clinical characteristics and laboratory parameters in preeclampsia
    • Lazar L, Rigó J Jr, Nagy B, et al. Relationship of circulating cell-free DNA levels to cell-free fetal DNA levels, clinical characteristics and laboratory parameters in preeclampsia. BMC Med Genet 2009;10:120.
    • (2009) BMC Med Genet , vol.10 , pp. 120
    • Lazar, L.1    Rigó Jr., J.2    Nagy, B.3
  • 31
    • 33749244801 scopus 로고    scopus 로고
    • Blood and urine samples as useful sources for the direct detection of tuberculosis by polymerase chain reaction
    • Rebollo MJ, San Juan Garrido R, Folgueira D, et al. Blood and urine samples as useful sources for the direct detection of tuberculosis by polymerase chain reaction. Diagn Microbiol Infect Dis 2006;56:141-6.
    • (2006) Diagn Microbiol Infect Dis , vol.56 , pp. 141-146
    • Rebollo, M.J.1    San Juan Garrido, R.2    Folgueira, D.3
  • 32
    • 70350572301 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis and Mycobacterium africanum in stools from children attending an immunization clinic in Ibadan, Nigeria
    • Cadmus SI, Jenkins AO, Godfroid J, et al. Mycobacterium tuberculosis and Mycobacterium africanum in stools from children attending an immunization clinic in Ibadan, Nigeria. Int J Infect Dis 2009;13:740-4.
    • (2009) Int J Infect Dis , vol.13 , pp. 740-744
    • Cadmus, S.I.1    Jenkins, A.O.2    Godfroid, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.