-
1
-
-
33646849728
-
Rho-dependent transcription termination: More questions than answers
-
Banerjee S., Chalissery J., Bandey I. and Sen R. (2006) Rho-dependent transcription termination: More questions than answers. J. Microbiol., 44, 11-22
-
(2006)
J. Microbiol
, vol.44
, pp. 11-22
-
-
Banerjee, S.1
Chalissery, J.2
Bandey, I.3
Sen, R.4
-
2
-
-
79960395328
-
Bacterial transcription terminators: The RNA 30-End chronicles
-
Peters J.M., Vangeloff A.D. and Landick R. (2011) Bacterial transcription terminators: The RNA 30-End chronicles. J. Mol. Biol., 412, 793-813
-
(2011)
J. Mol. Biol
, vol.412
, pp. 793-813
-
-
Peters, J.M.1
Vangeloff, A.D.2
Landick, R.3
-
3
-
-
80054684922
-
Interaction with the nascent RNA is a pre-requisite for the recruitment of Rho to the transcription elongation complex in vitro
-
Kalyani B.S., Muteeb G., Qayyum M.Z. and Sen R. (2011) Interaction with the nascent RNA is a pre-requisite for the recruitment of Rho to the transcription elongation complex in vitro. J. Mol. Biol., 413, 548-560
-
(2011)
J. Mol. Biol
, vol.413
, pp. 548-560
-
-
Kalyani, B.S.1
Muteeb, G.2
Qayyum, M.Z.3
Sen, R.4
-
4
-
-
0019364280
-
Mutants of satellite bacteriophage P4 that are defective in the suppression of transcriptional polarity
-
Sauer B., Ow D., Ling L. and Calendar R. (1981) Mutants of satellite bacteriophage P4 that are defective in the suppression of transcriptional polarity. J. Mol. Biol., 145, 29-46
-
(1981)
J. Mol. Biol
, vol.145
, pp. 29-46
-
-
Sauer, B.1
Ow, D.2
Ling, L.3
Calendar, R.4
-
5
-
-
0017150896
-
Relief of P2 bacteriophage amber mutant polarity by the satellite bacteriophage P4
-
Sunshine M. and Six E. (1976) Relief of P2 bacteriophage amber mutant polarity by the satellite bacteriophage P4. J. Mol. Biol., 106, 673-682
-
(1976)
J. Mol. Biol
, vol.106
, pp. 673-682
-
-
Sunshine, M.1
Six, E.2
-
6
-
-
0026751260
-
The polarity suppression factor of bacteriophage P4 is also a decoration protein of the P4 capsid
-
Isaksen M.L., Rishovd S.T., Calendar R. and Lindqvist B.H. (1992) The polarity suppression factor of bacteriophage P4 is also a decoration protein of the P4 capsid. Virology, 188, 831-839
-
(1992)
Virology
, vol.188
, pp. 831-839
-
-
Isaksen, M.L.1
Rishovd, S.T.2
Calendar, R.3
Lindqvist, B.H.4
-
7
-
-
0027225537
-
Capsid localization of the bacteriophage P4 Psu protein
-
Dokland T., Isaksen M.L., Fuller S.D. and Lindqvist B.H. (1993) Capsid localization of the bacteriophage P4 Psu protein. Virology, 194, 682-687
-
(1993)
Virology
, vol.194
, pp. 682-687
-
-
Dokland, T.1
Isaksen, M.L.2
Fuller, S.D.3
Lindqvist, B.H.4
-
8
-
-
0025720063
-
The Psu protein of bacteriophage P4 is an antitermination factor for rho-dependent transcription termination
-
Linderoth N.A. and Calendar R. (1991) The Psu protein of bacteriophage P4 is an antitermination factor for rho-dependent transcription termination. J. Bacteriol., 173, 6722-6731
-
(1991)
J. Bacteriol
, vol.173
, pp. 6722-6731
-
-
Linderoth, N.A.1
Calendar, R.2
-
9
-
-
0031555648
-
In vivo and in vitro evidence for an anti-Rho activity induced by the phage P4 polarity suppressor protein Psu
-
Linderoth N.A., Tang G. and Calendar R. (1997) In vivo and in vitro evidence for an anti-Rho activity induced by the phage P4 polarity suppressor protein Psu. Virology, 227, 131-141
-
(1997)
Virology
, vol.227
, pp. 131-141
-
-
Linderoth, N.A.1
Tang, G.2
Calendar, R.3
-
10
-
-
33748754299
-
Mechanism of inhibition of Rho-dependent transcription termination by bacteriophage P4 protein Psu
-
Pani B., Banerjee S., Chalissery J., Abishek M., Loganathan R.M., Suganthan R.B. and Sen R. (2006) Mechanism of inhibition of Rho-dependent transcription termination by bacteriophage P4 protein Psu. J. Biol. Chem., 281, 26491-26500
-
(2006)
J. Biol. Chem
, vol.281
, pp. 26491-26500
-
-
Pani, B.1
Banerjee, S.2
Chalissery, J.3
Abishek, M.4
Loganathan, R.M.5
Suganthan, R.B.6
Sen, R.7
-
11
-
-
65849200100
-
Interaction surface of bacteriophage P4 protein Psu required for the complex formation with the transcription terminator Rho
-
Pani B., Ranjan A. and Sen R. (2009) Interaction surface of bacteriophage P4 protein Psu required for the complex formation with the transcription terminator Rho. J. Mol. Biol., 389, 647-660
-
(2009)
J. Mol. Biol
, vol.389
, pp. 647-660
-
-
Pani, B.1
Ranjan, A.2
Sen, R.3
-
12
-
-
84871769903
-
The first structure of Polarity Suppression protein, Psu from Enterobacteria phage P4, reveals a novel fold and a knotted dimer
-
Banerjee R., Nath S., Ranjan A., Khamrui K., Pani B., Sen R. and Sen U. (2012) The first structure of Polarity Suppression protein, Psu from Enterobacteria phage P4, reveals a novel fold and a knotted dimer. J. Biol. Chem., 287, 44667-44675
-
(2012)
J. Biol. Chem
, vol.287
, pp. 44667-44675
-
-
Banerjee, R.1
Nath, S.2
Ranjan, A.3
Khamrui, K.4
Pani, B.5
Sen, R.6
Sen, U.7
-
13
-
-
34548667500
-
Transcription termination defective mutants of Rho: Role of different functions of Rho in releasing RNA from the elongation complex
-
Chalissery J., Banerjee S., Bandey I. and Sen R. (2007) Transcription termination defective mutants of Rho: Role of different functions of Rho in releasing RNA from the elongation complex. J. Mol. Biol., 371, 855-872
-
(2007)
J. Mol. Biol
, vol.371
, pp. 855-872
-
-
Chalissery, J.1
Banerjee, S.2
Bandey, I.3
Sen, R.4
-
14
-
-
84855440257
-
Random mutagenesis using mutator strain
-
Muteeb G. and Sen R. (2010) Random mutagenesis using mutator strain. Methods Mol. Biol., 634, 411-419
-
(2010)
Methods Mol. Biol
, vol.634
, pp. 411-419
-
-
Muteeb, G.1
Sen, R.2
-
15
-
-
40849089190
-
A one-step PCR-based method for rapid and efficient site-directed fragment deletion insertion, and substitution mutagenesis
-
Qi D. and Scholthof K.B. (2008) A one-step PCR-based method for rapid and efficient site-directed fragment deletion, insertion, and substitution mutagenesis. J. Virol. Methods, 149, 85-90
-
(2008)
J. Virol. Methods
, vol.149
, pp. 85-90
-
-
Qi, D.1
Scholthof, K.B.2
-
16
-
-
0024314683
-
A microtiter plate-based system for the semiautomated growth and assay of bacterial cells for betagalactosidase activity
-
Menzel R. (1989) A microtiter plate-based system for the semiautomated growth and assay of bacterial cells for betagalactosidase activity. Anal. Biochem., 181, 40-50
-
(1989)
Anal. Biochem
, vol.181
, pp. 40-50
-
-
Menzel, R.1
-
17
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones T.A., Zou J.Y., Cowan S.W. and Kjeldgaard M. (1991) Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr., A47, 110-119
-
(1991)
Acta Crystallogr
, vol.A47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
18
-
-
33747858757
-
NOMAD-Ref: Visualization, deformation and refinement of macromolecular structures based on all-Atom normal mode analysis
-
Lindahl E., Azuara C., Koehl P. and Delarue M. (2006) NOMAD-Ref: Visualization, deformation and refinement of macromolecular structures based on all-Atom normal mode analysis. Nucleic Acids Res., 34, W52-W56
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Lindahl, E.1
Azuara, C.2
Koehl, P.3
Delarue, M.4
-
19
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel E. and Henrick K. (2007) Inference of macromolecular assemblies from crystalline state. J. Mol. Biol., 372, 774-797
-
(2007)
J. Mol. Biol
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
20
-
-
0031056514
-
Synthesis of the protein cutting reagent iron (S)-1- (pbromoacetamidobenzyl) ethylenediaminetetraacetate and conjugation to cysteine side chains
-
Greiner D.P., Miyake R., Moran J.K., Jones A.D., Negishi T., Ishihama A. and Meares C.F. (1997) Synthesis of the protein cutting reagent iron (S)-1-(pbromoacetamidobenzyl) ethylenediaminetetraacetate and conjugation to cysteine side chains. Bioconjug. Chem., 8, 44-48
-
(1997)
Bioconjug. Chem
, vol.8
, pp. 44-48
-
-
Greiner, D.P.1
Miyake, R.2
Moran, J.K.3
Jones, A.D.4
Negishi, T.5
Ishihama, A.6
Meares, C.F.7
-
22
-
-
73649086853
-
A bacterial transcription terminator with inefficient molecular motor action but with a robust transcription termination function
-
Kalarickal N.C., Ranjan A., Kalyani B.S., Wal M. and Sen R. (2010) A bacterial transcription terminator with inefficient molecular motor action but with a robust transcription termination function. J. Mol. Biol., 395, 966-982
-
(2010)
J. Mol. Biol
, vol.395
, pp. 966-982
-
-
Kalarickal, N.C.1
Ranjan, A.2
Kalyani, B.S.3
Wal, M.4
Sen, R.5
-
23
-
-
33750477997
-
Structure of the Rho transcription terminator: Mechanism of mRNA recognition and helicase loading
-
Skordalakes E. and Berger J.M. (2006) Structure of the Rho transcription terminator: Mechanism of mRNA recognition and helicase loading. Cell, 127, 553-564
-
(2006)
Cell
, vol.127
, pp. 553-564
-
-
Skordalakes, E.1
Berger, J.M.2
-
24
-
-
70350344051
-
Running in reverse: The structural basis for translocation polarity in hexameric helicases
-
Thomsen N.D. and Burger J. (2009) Running in reverse: The structural basis for translocation polarity in hexameric helicases. Cell, 139, 523-534
-
(2009)
Cell
, vol.139
, pp. 523-534
-
-
Thomsen, N.D.1
Burger, J.2
-
25
-
-
0029816948
-
Identifying the bicyclomycin binding domain through biochemical analysis of antibiotic-resistant rho proteins
-
Magyar A., Zhang X., Kohn H. and Widger W.R. (1996) Identifying the bicyclomycin binding domain through biochemical analysis of antibiotic-resistant rho proteins. J. Biol. Chem., 271, 25369-25374
-
(1996)
J. Biol. Chem
, vol.271
, pp. 25369-25374
-
-
Magyar, A.1
Zhang, X.2
Kohn, H.3
Widger, W.R.4
-
26
-
-
0033548445
-
The antibiotic bicyclomycin affects the secondary RNA binding site of Escherichia coli transcription termination factor Rho
-
Magyar A., Zhang X., Abdi F., Kohn H. and Widger W.R. (1999) The antibiotic bicyclomycin affects the secondary RNA binding site of Escherichia coli transcription termination factor Rho. J. Biol. Chem., 274, 7316-7324
-
(1999)
J. Biol. Chem
, vol.274
, pp. 7316-7324
-
-
Magyar, A.1
Zhang, X.2
Abdi, F.3
Kohn, H.4
Widger, W.R.5
-
27
-
-
11844255730
-
Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin
-
Skordalakes E., Brogan A.P., Park B.S., Kohn H. and Berger J.M. (2005) Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin. Cell, 13, 99-109
-
(2005)
Cell
, vol.13
, pp. 99-109
-
-
Skordalakes, E.1
Brogan, A.P.2
Park, B.S.3
Kohn, H.4
Berger, J.M.5
-
28
-
-
79960623040
-
The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rho-dependent terminators
-
Rabhi M., Espéli O., Schwartz A., Cayrol B., Rahmouni A.R., Arluison V. and Boudvillain M. (2011) The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rho-dependent terminators. EMBO J., 30, 2805-2816
-
(2011)
EMBO J.
, vol.30
, pp. 2805-2816
-
-
Rabhi, M.1
Espéli, O.2
Schwartz, A.3
Cayrol, B.4
Rahmouni, A.R.5
Arluison, V.6
Boudvillain, M.7
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