Molecular characterization of "Candidatus Similichlamydia latridicola" gen. nov., sp. nov. (Chlamydiales: "Candidatus Parilichlamydiaceae"), a novel Chlamydia-like epitheliocystis agent in the striped trumpeter, Latris lineata (Forster)

Applied and Environmental Microbiology

Volumn 79, Issue 16, 2013, Pages 4914-4920

  Stride, M C ^a   Polkinghorne, A ^b   Miller, T L ^c   Nowak, B F ^a  

^a UNIVERSITY OF TASMANIA   (Australia)

^b QUEENSLAND UNIVERSITY OF TECHNOLOGY   (Australia)

^c JAMES COOK UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA SEQUENCES; HISTOLOGICAL ANALYSIS; IN-SITU HYBRIDIZATION; MOLECULAR ANALYSIS; MOLECULAR CHARACTERIZATION; PHYLOGENETIC ANALYSIS; SEQUENCE DIVERGENCES; TASMANIA , AUSTRALIA;

BIOTECHNOLOGY; MICROBIOLOGY;

BACTERIA;

BACTERIAL RNA; RNA 16S;

AQUACULTURE; CLADISTICS; DISEASE PREVALENCE; FISH; GENOTYPE; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; NEW TAXON; PHYLOGENETICS; RNA;

ANIMAL; ANIMAL DISEASE; ARTICLE; CHLAMYDIACEAE; DNA SEQUENCE; FISH DISEASE; GENETICS; GRAM NEGATIVE INFECTION; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PERCIFORMES; PHYLOGENY; POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY;

ANIMALS; CHLAMYDIALES; FISH DISEASES; GRAM-NEGATIVE BACTERIAL INFECTIONS; MOLECULAR SEQUENCE DATA; PERCIFORMES; PHYLOGENY; POLYMERASE CHAIN REACTION; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY;

AUSTRALIA; TASMANIA;

EID: 84881018730     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00746-13     Document Type: Article

References (33)

1. Battaglene SC, Cobcroft JM. 2007. Advances in the culture of striped trumpeter larvae: a review. Aquaculture 268:195-208
2. Hartmann K, Lyle JM. 2011. Tasmanian scalefish fishery-2009/10. Institute for Marine and Antarctic Studies, University of Tasmania, Sandy Bay, Tasmania
3. Battaglene SC, Cobcroft JM. 2010. Enhanced hatchery production of striped trumpeter, Latris lineata, in Tasmania through system design, microbial control and early weaning. Aquafin Cooperative Research Centre, Hobart, Tasmania
4. Cobcroft JM, Battaglene SC. 2013. Ultraviolet irradiation is an effective alternative to ozonation as a seawater treatment to prevent Kudoa neurophila infection of striped trumpeter. J. Fish Dis. 369:57-65
5. Andrews M, Battaglene SC, Cobcroft JM, Adams MB, Noga EJ, Nowak BF. 2010. Host response to the chondracanthid copepod Chondracanthus goldsmidi, a gill parasite of the striped trumpeter, Latris lineata (Forster), in Tasmania. J. Fish Dis. 33:211-220
6. Lai CC, Crosbie PBB, Battaglene SC, Nowak BF. 2013. Effects of epitheliocystis on serum lysozyme activity and osmoregulation in cultured juvenile striped trumpeter Latris lineata (Forster). Aquaculture 388-391: 99-104
7. Nowak BF, La Patra SE. 2006. Review: epitheliocystis in fish. J. Fish Dis. 29:573-588
8. Karlsen M, Nylund A, Watanabe K, Helvik JV, Nylund S, Plarre H. 2008. Characterisation of "Candidatus Clavochlamydia salmonicola": an intracellular bacterium infecting salmonid fish. Environ. Microbiol. 10: 208-218
9. Mitchell SO, Steinum T, Rodger H, Holland C, Falk K, Colquhoun DJ. 2010. Epitheliocystis in Atlantic salmon, Salmo salar L., farmed in fresh water in Ireland is associated with "Candidatus Clavochlamydia salmonicola" infection. J. Fish Dis. 33:665-673
10. Stride MC, Polkinghorne A, Miller TL, GroffJM, La Patra SE, Nowak BF. 2013. Molecular characterization of "Candidatus Parilichlamydia carangidicola," a novel Chlamydia-like epitheliocystis agent in yellowtai kingfish, Seriola lalandi (Valenciennes), and the proposal of a new family, "Candidatus Parilichlamydiaceae" fam. nov. (order Chlamydiales). Appl. Environ. Microbiol. 79:1590-1597
11. Draghi A, II. 2006. Molecular characterization of chlamydia like bacteria associated with epitheliocystis in farmed salmonids, Atlantic salmon (Salmo salar) and Arctic char (Salvelinus alpinus), and environmental chlamydiae from aquatic environments. Ph. D. thesis. University of Connecticut, Storrs, CT
12. Meijer A, Roholl PJM, Ossewaarde JM, Jones B, Nowak BF. 2006. Molecular evidence for association of Chlamydiales bacteria with epitheliocystis in leafy seadragon (Phycodurus eques), silver perch (Bidyanus bidyanus), and barramundi (Lates calcarifer). Appl. Environ. Microbiol. 72:284-290
13. Lewis EJ, Mc Laughlin SM, Bodammer JE, Sawyer TK. 1992. Epitheliocystis in ten new host species of marine fish. J. Fish Dis. 15:267-271
14. Crespo S, Zarza C, Padros F, Marin de Mateo M. 1999. Epitheliocystis agents in sea bream Sparus aurata: morphological evidence for two distinct Chlamydia-like developmental cycles. Dis. Aquat. Organ. 37:61-72
15. Draghi A, Bebak IIJ, Popov VL, Noble AC, Geary SJ, West A, Byrne P, Frasca S, Jr. 2007. Characterization of a Neochlamydia-like bacterium associated with epitheliocystis in cultured Arctic charr Salvelinus alpinus. Dis. Aquat. Organ. 76:27-38
16. Syasina I, Park IS, Kim JM. 2004. Epitheliocystis disease in red sea bream Pagrus major and induced hybrid, red sea bream Pagrus major female black sea bream Acanthopagrus schlegeli male, cultured in Korea. Bull. Eur. Assoc. Fish Pathol. 24:260-267
17. Fredericks DN, Relman DA. 1996. Sequence-based identification of microbial pathogens: a recondiseration of Koch's postulates. Clin. Microbiol. Rev. 9:18-33
18. Everett KDE, Bush RM, Anderson AA. 1999. Emended description of the order Chlamydiales, proposal of Parachlamydiceae fam. nov. and Simkaniaceae fam. nov., each containing one monotypic genus, revised taxonomy of the family Chlamydiceae, including a new genus and five new species, and standards for the identification of organisms. Int. J. Syst. Bacteriol. 49:415-440
19. Polkinghorne A, Schmidt-Posthaus H, Meijer A, Lehner A, Vaughan L. 2010. Novel Chlamydiales associated with epitheliocystis in a leopard shark Triakis semifasciata. Dis. Aquat. Organ. 91:75-81
20. Meijer A, van der Vliet JA, Roholl PJM, Gielis Proper SK, de Vries A, Ossewaarde JM. 1999. Chlamydia pneumoniae in abdominal aortic aneurysms: abundance of membrane components in the absence of heat shock protein 60 and DNA. Arterioscler. Thromb. Vasc. Biol. 19:2680-2686
21. Posada D. 2008. jModelTest: phylogenetic model averaging. Mol. Biol. Evol. 25:1253-1256
22. Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52:696-704
23. Ronquist F, Huelsenbeck JP. 2003. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574
24. Stamatakis A, Hoover P, Rougemont J. 2008. A rapid bootstrap algorithm for the RAxML web servers. Syst. Biol. 57:758-771
25. Draghi A, Popov VL, Kahl MM, Stanton JB, Brown CC, Tsongalis GJ, West A, Frasca S. 2004. Characterization of "Candidatus Piscichlamydia salmonis" (order Chlamydiales), a Chlamydia-like bacterium associated with epitheliocystis in farmed Atlantic salmon (Salmo salar). J. Clin. Microbiol. 42:5286-5297
26. Nylund A, Watanabe K, Nylund S, Karlsen M, Saether PA, Arnesen CE, Karlsbakk E. 2008. Morphogenesis of salmonid gill poxvirus associated with proliferative gill disease in farmed Atlantic salmon (Salmo salar) in Norway. Arch. Virol. 153:1299-1309
27. Draghi A, Bebak J, Daniels S, Tulman ER, Geary SJ, West A, Popov VL, Frasca S, Jr. 2010. Identification of "Candidatus Piscichlamydia salmonis" in Arctic charr Salvelinus alpinus during a survey of charr production facilities in North America. Dis. Aquat. Organ. 89:39-49
28. Goodwin AE, Park E, Nowak BF. 2005. Short communication: successful treatment of largemouth bass, Micropterus salmoides (L.), with epitheliocystis hyperinfection. J. Fish Dis. 28:623-625
29. Szakolczai J, Vetesi F, Pitz. 1999. Epitheliocystis disease in cultured pacu (Piaractus mesopotamicus) in Brazil. Acta Vet. Hung. 47:311-318
30. Bradley TM, Newcomer CE, Maxwell KO. 1988. Epitheliocystis associated with massive mortalities of cultured lake trout Salvelinus namaycush. Dis. Aquat. Organ. 4:9-17
31. Company R, Sitja Bobadilla A, Pujalte MJ, Garay E, Alvarez Pellitero P, Perez Sanchez J. 1999. Bacterial and parasitic pathogens in cultured common dentex, Dentex dentex L. J. Fish Dis. 22:299-309
32. Katharios P, Papadaki M, Papandroulakis N, Divanach P. 2008. Severe mortality in mesocosm-reared sharpsnout sea bream Diplodus puntazzo larvae due to epitheliocystis infection. Dis. Aquat. Organ. 82:55-60
33. Nowak BF. 1996. Health of red morwong, Cheilodactylus fuscus, and rock cale, Crinodus lophodon, from Sydney cliff-face sewage outfalls. Mar. Pollut. Bull. 33:281-292