-
1
-
-
33646852746
-
The prevalence of hepatitis C virus infection in the United States, 1999 through 2002
-
Armstrong GL, Wasley A, Simard EP, McQuillan GM, Kuhnert WL, Alter MJ. The prevalence of hepatitis C virus infection in the United States, 1999 through 2002. Ann Intern Med 2006; 144: 705-714. (Pubitemid 46780630)
-
(2006)
Annals of Internal Medicine
, vol.144
, Issue.10
, pp. 705-714
-
-
Armstrong, G.L.1
Wasley, A.2
Simard, E.P.3
McQuillan, G.M.4
Kuhnert, W.L.5
Alter, M.J.6
-
2
-
-
33748114343
-
The contributions of hepatitis B virus and hepatitis C virus infections to cirrhosis and primary liver cancer worldwide
-
DOI 10.1016/j.jhep.2006.05.013, PII S0168827806002972
-
Perz JF, Armstrong GL, Farrington LA, Hutin YJ, Bell BP. The contributions of hepatitis B virus and hepatitis C virus infections to cirrhosis and primary liver cancer worldwide. J Hepatol 2006; 45: 529-538. (Pubitemid 44307383)
-
(2006)
Journal of Hepatology
, vol.45
, Issue.4
, pp. 529-538
-
-
Perz, J.F.1
Armstrong, G.L.2
Farrington, L.A.3
Hutin, Y.J.F.4
Bell, B.P.5
-
3
-
-
45749088509
-
Adaptive immune responses to hepatitis C virus: From viral immunobiology to a vaccine
-
DOI 10.1515/BC.2008.061
-
Thimme R, Neumann-Haefelin C, Boettler T, Blum HE. Adaptive immune responses to hepatitis C virus: from viral immunobiology to a vaccine. Biol Chem 2008; 389: 457-467. (Pubitemid 351874195)
-
(2008)
Biological Chemistry
, vol.389
, Issue.5
, pp. 457-467
-
-
Thimme, R.1
Neumann-Haefelin, C.2
Boettler, T.3
Blum, H.E.4
-
4
-
-
77953960796
-
Hepatitis C virus evasion of adaptive immune responses: A model for viral persistence
-
Burke KP, Cox AL. Hepatitis C virus evasion of adaptive immune responses: a model for viral persistence. Immunol Res 2010; 47: 216-227.
-
(2010)
Immunol Res
, vol.47
, pp. 216-227
-
-
Burke, K.P.1
Cox, A.L.2
-
5
-
-
0030671121
-
Immunological significance of cytotoxic T lymphocyte epitope variants in patients chronically infected by the hepatitis C virus
-
Chang KM, Rehermann B, McHutchison JG, Pasquinelli C, Southwood S, Sette A et al. Immunological significance of cytotoxic T lymphocyte epitope variants in patients chronically infected by the hepatitis C virus. J Clin Invest 1997; 100: 2376-2385. (Pubitemid 27500163)
-
(1997)
Journal of Clinical Investigation
, vol.100
, Issue.9
, pp. 2376-2385
-
-
Chang, K.-M.1
Rehermann, B.2
McHutchison, J.G.3
Pasquinelli, C.4
Southwood, S.5
Sette, A.6
Chisari, F.V.7
-
6
-
-
77951466879
-
Specific human leukocyte antigen class i and II alleles associated with hepatitis C virus viremia
-
Kuniholm MH, Kovacs A, Gao X, Xue X, Marti D, Thio CL et al. Specific human leukocyte antigen class I and II alleles associated with hepatitis C virus viremia. Hepatology 2010; 51: 1514-1522.
-
(2010)
Hepatology
, vol.51
, pp. 1514-1522
-
-
Kuniholm, M.H.1
Kovacs, A.2
Gao, X.3
Xue, X.4
Marti, D.5
Thio, C.L.6
-
7
-
-
0028842070
-
Several HLA alleles share overlapping peptide specificities
-
Sidney J, del Guercio MF, Southwood S, Engelhard VH, Appella E, Rammensee HG et al. Several HLA alleles share overlapping peptide specificities. J Immunol 1995; 154: 247-259.
-
(1995)
J Immunol
, vol.154
, pp. 247-259
-
-
Sidney, J.1
Del Guercio, M.F.2
Southwood, S.3
Engelhard, V.H.4
Appella, E.5
Rammensee, H.G.6
-
8
-
-
0029897044
-
Practical, biochemical and evolutionary implications of the discovery of HLA class I supermotifs
-
DOI 10.1016/0167-5699(96)80542-1
-
Sidney J, Grey HM, Kubo RT, Sette A. Practical, biochemical and evolutionary implications of the discovery of HLA class I supermotifs. Immunol Today 1996; 17: 261-266. (Pubitemid 26183489)
-
(1996)
Immunology Today
, vol.17
, Issue.6
, pp. 261-266
-
-
Sidney, J.1
Grey, H.M.2
Kubo, R.T.3
Sette, A.4
-
9
-
-
33744930848
-
Human leukocyte antigen B58 supertype and human immunodeficiency virus type 1 infection in native Africans
-
DOI 10.1128/JVI.02119-05
-
Lazaryan A, Lobashevsky E, Mulenga J, Karita E, Allen S, Tang J et al. Human leukocyte antigen B58 supertype and human immunodeficiency virus type 1 infection in native Africans. J Virol 2006; 80: 6056-6060. (Pubitemid 43849183)
-
(2006)
Journal of Virology
, vol.80
, Issue.12
, pp. 6056-6060
-
-
Lazaryan, A.1
Lobashevsky, E.2
Mulenga, J.3
Karita, E.4
Allen, S.5
Tang, J.6
Kaslow, R.A.7
-
10
-
-
77649207758
-
Human leukocyte antigen class i supertypes and HIV-1 control in African Americans
-
Lazaryan A, Song W, Lobashevsky E, Tang J, Shrestha S, Zhang K et al. Human leukocyte antigen class I supertypes and HIV-1 control in African Americans. J Virol 2010; 84: 2610-2617.
-
(2010)
J Virol
, vol.84
, pp. 2610-2617
-
-
Lazaryan, A.1
Song, W.2
Lobashevsky, E.3
Tang, J.4
Shrestha, S.5
Zhang, K.6
-
11
-
-
0038379170
-
Advantage of rare HLA supertype in HIV disease progression
-
DOI 10.1038/nm893
-
Trachtenberg E, Korber B, Sollars C, Kepler TB, Hraber PT, Hayes E et al. Advantage of rare HLA supertype in HIV disease progression. Nat Med 2003; 9: 928-935. (Pubitemid 36889937)
-
(2003)
Nature Medicine
, vol.9
, Issue.7
, pp. 928-935
-
-
Trachtenberg, E.1
Korber, B.2
Sollars, C.3
Kepler, T.B.4
Hraber, P.T.5
Hayes, E.6
Funkhouser, R.7
Fugate, M.8
Theiler, J.9
Hsu, Y.S.10
Kunstman, K.11
Wu, S.12
Phair, J.13
Erlich, H.14
Wolinsky, S.15
-
12
-
-
0033555410
-
Identification of HLA-A3 and -B7-restricted CTL response to hepatitis C virus in patients with acute and chronic hepatitis C
-
Chang KM, Gruener NH, Southwood S, Sidney J, Pape GR, Chisari FV et al. Identification of HLA-A3 and-B7-restricted CTL response to hepatitis C virus in patients with acute and chronic hepatitis C. J Immunol 1999; 162: 1156-1164. (Pubitemid 29035448)
-
(1999)
Journal of Immunology
, vol.162
, Issue.2
, pp. 1156-1164
-
-
Chang, K.-M.1
Gruener, N.H.2
Southwood, S.3
Sidney, J.4
Pape, G.R.5
Chisari, F.V.6
Sette, A.7
-
13
-
-
9344219963
-
Identification of A2-restricted hepatitis C virus-specific cytotoxic T lymphocyte epitopes from conserved regions of the viral genome
-
Wentworth PA, Sette A, Celis E, Sidney J, Southwood S, Crimi C et al. Identification of A2-restricted hepatitis C virus-specific cytotoxic T lymphocyte epitopes from conserved regions of the viral genome. Int Immunol 1996; 8: 651-659. (Pubitemid 26148286)
-
(1996)
International Immunology
, vol.8
, Issue.5
, pp. 651-659
-
-
Wentworth, P.A.1
Sette, A.2
Celis, E.3
Sidney, J.4
Southwood, S.5
Crimi, C.6
Stitely, S.7
Keogh, E.8
Wong, N.C.9
Livingston, B.10
Alazard, D.11
Vitiello, A.12
Grey, H.M.13
Chisari, F.V.14
Chesnut, R.W.15
Fikes, J.16
-
14
-
-
79958184746
-
Functional classification of class II human leukocyte antigen (HLA) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes
-
Greenbaum J, Sidney J, Chung J, Brander C, Peters B, Sette A. Functional classification of class II human leukocyte antigen (HLA) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes. Immunogenetics 2011; 63: 325-335.
-
(2011)
Immunogenetics
, vol.63
, pp. 325-335
-
-
Greenbaum, J.1
Sidney, J.2
Chung, J.3
Brander, C.4
Peters, B.5
Sette, A.6
-
15
-
-
2342561929
-
Definition of supertypes for HLA molecules using clustering of specificity matrices
-
DOI 10.1007/s00251-004-0647-4
-
Lund O, Nielsen M, Kesmir C, Petersen AG, Lundegaard C, Worning P et al. Definition of supertypes for HLA molecules using clustering of specificity matrices. Immunogenetics 2004; 55: 797-810. (Pubitemid 38650985)
-
(2004)
Immunogenetics
, vol.55
, Issue.12
, pp. 797-810
-
-
Lund, O.1
Nielsen, M.2
Kesmir, C.3
Petersen, A.G.4
Lundegaard, C.5
Worning, P.6
Sylvester-Hvid, C.7
Lamberth, K.8
Roder, G.9
Justesen, S.10
Buus, S.11
Brunak, S.12
-
16
-
-
48249083459
-
Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: Net MHCIIpan
-
Nielsen M, Lundegaard C, Blicher T, Peters B, Sette A, Justesen S et al. Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: Net MHCIIpan. PLoS Comput Biol 2008; 4: e1000107.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Nielsen, M.1
Lundegaard, C.2
Blicher, T.3
Peters, B.4
Sette, A.5
Justesen, S.6
-
17
-
-
0031751274
-
A new categorization of HLA DR alleles on a functional basis
-
DOI 10.1016/S0198-8859(98)00067-6, PII S0198885998000676
-
Ou D, Mitchell LA, Tingle AJ. A new categorization of HLA DR alleles on a functional basis. Hum Immunol 1998; 59: 665-676. (Pubitemid 28436468)
-
(1998)
Human Immunology
, vol.59
, Issue.10
, pp. 665-676
-
-
Ou, D.1
Mitchell, L.A.2
Tingle, A.J.3
-
18
-
-
47149118872
-
Human leukocyte antigen class II associations with hepatitis C virus clearance and virus-specific CD4 T cell response among Caucasians and African Americans
-
DOI 10.1002/hep.22287
-
Harris RA, Sugimoto K, Kaplan DE, Ikeda F, Kamoun M, Chang KM. Human leukocyte antigen class II associations with hepatitis C virus clearance and virusspecific CD4 T cell response among Caucasians and African Americans. Hepatology 2008; 48: 70-79. (Pubitemid 351975532)
-
(2008)
Hepatology
, vol.48
, Issue.1
, pp. 70-79
-
-
Harris, R.A.1
Sugimoto, K.2
Kaplan, D.E.3
Ikeda, F.4
Kamoun, M.5
Chang, K.-M.6
-
19
-
-
0033388724
-
Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism
-
Sette A, Sidney J. Nine major HLA class I supertypes account for the vast preponderance of HLA-A and-B polymorphism. Immunogenetics 1999; 50: 201-212. (Pubitemid 30099525)
-
(1999)
Immunogenetics
, vol.50
, Issue.3-4
, pp. 201-212
-
-
Sette, A.1
Sidney, J.2
-
20
-
-
33846813973
-
Mutually exclusive T-cell receptor induction and differential susceptibility to human immunodeficiency virus type 1 mutational escape associated with a two-amino-acid difference between HLA class I subtypes
-
DOI 10.1128/JVI.01580-06
-
Yu XG, Lichterfeld M, Chetty S, Williams KL, Mui SK, Miura T et al. Mutually exclusive T-cell receptor induction and differential susceptibility to human immunodeficiency virus type 1 mutational escape associated with a two-aminoacid difference between HLA class I subtypes. J Virol 2007; 81: 1619-1631. (Pubitemid 46214437)
-
(2007)
Journal of Virology
, vol.81
, Issue.4
, pp. 1619-1631
-
-
Yu, X.G.1
Lichterfeld, M.2
Chetty, S.3
Williams, K.L.4
Mui, S.K.5
Miura, T.6
Frahm, N.7
Feeney, M.E.8
Tang, Y.9
Pereyra, F.10
LaBute, M.X.11
Pfafferott, K.12
Leslie, A.13
Crawford, H.14
Allgaier, R.15
Hildebrand, W.16
Kaslow, R.17
Brander, C.18
Allen, T.M.19
Rosenberg, E.S.20
Kiepiela, P.21
Vajpayee, M.22
Goepfert, P.A.23
Altfeld, M.24
Goulder, P.J.R.25
Walker, B.D.26
more..
-
21
-
-
1042292586
-
Viral clearance occurs very early during the natural resolution of hepatitis C virus infection in persons with haemophilia
-
Eyster ME, Sanders J, Goedert JJ. Viral clearance occurs very early during the natural resolution of hepatitis C virus infection in persons with haemophilia. Haemophilia 2004; 10: 75-80. (Pubitemid 38195629)
-
(2004)
Haemophilia
, vol.10
, Issue.1
, pp. 75-80
-
-
Eyster, M.E.1
Sanders, J.2
Goedert, J.J.3
-
22
-
-
84863183220
-
Spontaneous clearance of chronic hepatitis C virus infection is associated with appearance of neutralizing antibodies and reversal of T-cell exhaustion
-
Raghuraman S, Park H, Osburn WO, Winkelstein E, Edlin BR, Rehermann B. Spontaneous clearance of chronic hepatitis C virus infection is associated with appearance of neutralizing antibodies and reversal of T-cell exhaustion. J Infect Dis 2012; 205: 763-771.
-
(2012)
J Infect Dis
, vol.205
, pp. 763-771
-
-
Raghuraman, S.1
Park, H.2
Osburn, W.O.3
Winkelstein, E.4
Edlin, B.R.5
Rehermann, B.6
-
23
-
-
0031669217
-
A geometric study of the amino acid sequence of class I HLA molecules
-
DOI 10.1007/s002510050439
-
Cano P, Fan B, Stass S. A geometric study of the amino acid sequence of class I HLA molecules. Immunogenetics 1998; 48: 324-334. (Pubitemid 28434641)
-
(1998)
Immunogenetics
, vol.48
, Issue.5
, pp. 324-334
-
-
Cano, P.1
Fan, B.2
Stass, S.3
-
24
-
-
33846703888
-
In silico grouping of peptide/HLA class I complexes using structural interaction characteristics
-
DOI 10.1093/bioinformatics/btl563
-
Tong JC, Tan TW, Ranganathan S. In silico grouping of peptide/HLA class I complexes using structural interaction characteristics. Bioinformatics 2007; 23: 177-183. (Pubitemid 46189607)
-
(2007)
Bioinformatics
, vol.23
, Issue.2
, pp. 177-183
-
-
Tong, J.C.1
Tan, T.W.2
Ranganathan, S.3
-
25
-
-
78650887245
-
A HLADRB supertype chart with potential overlapping peptide binding function
-
Mohanapriya A, Nandagond S, Shapshak P, Kangueane U, Kangueane P. A HLADRB supertype chart with potential overlapping peptide binding function. Bioinformation 2010; 4: 300-309.
-
(2010)
Bioinformation
, vol.4
, pp. 300-309
-
-
Mohanapriya, A.1
Nandagond, S.2
Shapshak, P.3
Kangueane, U.4
Kangueane, P.5
-
26
-
-
28444486267
-
A framework to sub-type HLA supertypes
-
Kangueane P, Sakharkar MK, Rajaseger G, Bolisetty S, Sivasekari B, Zhao B et al. A framework to sub-type HLA supertypes. Front Biosci 2005; 10: 879-886.
-
(2005)
Front Biosci
, vol.10
, pp. 879-886
-
-
Kangueane, P.1
Sakharkar, M.K.2
Rajaseger, G.3
Bolisetty, S.4
Sivasekari, B.5
Zhao, B.6
-
27
-
-
1642407844
-
Identifiying human MHC supertypes using bioinformatic methods
-
Doytchinova IA, Guan P, Flower DR. Identifiying human MHC supertypes using bioinformatic methods. J Immunol 2004; 172: 4314-4323. (Pubitemid 38375246)
-
(2004)
Journal of Immunology
, vol.172
, Issue.7
, pp. 4314-4323
-
-
Doytchinova, I.A.1
Guan, P.2
Flower, D.R.3
-
28
-
-
33846662153
-
Identifying HLA supertypes by learning distance functions
-
DOI 10.1093/Bioinformatics/btl324
-
Hertz T, Yanover C. Identifying HLA supertypes by learning distance functions. Bioinformatics 2007; 23: e148-e155. (Pubitemid 46189650)
-
(2007)
Bioinformatics
, vol.23
, Issue.2
-
-
Hertz, T.1
Yanover, C.2
-
29
-
-
44649137451
-
Definition of MHC supertypes through clustering of MHC peptide-binding repertoires
-
Reche PA, Reinherz EL. Definition of MHC supertypes through clustering of MHC peptide-binding repertoires. Methods Mol Biol 2007; 409: 163-173.
-
(2007)
Methods Mol Biol
, vol.409
, pp. 163-173
-
-
Reche, P.A.1
Reinherz, E.L.2
-
30
-
-
39649122106
-
HLA class i supertypes: A revised and updated classification
-
Sidney J, Peters B, Frahm N, Brander C, Sette A. HLA class I supertypes: a revised and updated classification. BMC Immunol 2008; 9: 1.
-
(2008)
BMC Immunol
, vol.9
, pp. 1
-
-
Sidney, J.1
Peters, B.2
Frahm, N.3
Brander, C.4
Sette, A.5
-
31
-
-
18944395866
-
In silico identification of supertypes for class II MHCs
-
Doytchinova IA, Flower DR. In silico identification of supertypes for class II MHCs. J Immunol 2005; 174: 7085-7095. (Pubitemid 40705674)
-
(2005)
Journal of Immunology
, vol.174
, Issue.11
, pp. 7085-7095
-
-
Doytchinova, I.A.1
Flower, D.R.2
-
32
-
-
77949846012
-
What's the best statistic for a simple test of genetic association in a case-control study?
-
Kuo CL, Feingold E. What's the best statistic for a simple test of genetic association in a case-control study? Genet Epidemiol 2010; 34: 246-253.
-
(2010)
Genet Epidemiol
, vol.34
, pp. 246-253
-
-
Kuo, C.L.1
Feingold, E.2
-
33
-
-
11844281595
-
The hepatitis C virus epidemic among injecting drug users
-
DOI 10.1016/j.meegid.2004.08.001, PII S1567134804000905
-
Pybus OG, Cochrane A, Holmes EC, Simmonds P. The hepatitis C virus epidemic among injecting drug users. Infect Genet Evol 2005; 5: 131-139. (Pubitemid 40090232)
-
(2005)
Infection, Genetics and Evolution
, vol.5
, Issue.2
, pp. 131-139
-
-
Pybus, O.G.1
Cochrane, A.2
Holmes, E.C.3
Simmonds, P.4
-
36
-
-
78149354807
-
NetMHCIIpan-2.0-Improved pan-specific HLA-DR predictions using a novel concurrent alignment and weight optimization training procedure
-
Nielsen M, Justesen S, Lund O, Lundegaard C, Buus S. NetMHCIIpan-2.0- Improved pan-specific HLA-DR predictions using a novel concurrent alignment and weight optimization training procedure. Immunome Res 2010; 6: 9.
-
(2010)
Immunome Res
, vol.6
, pp. 9
-
-
Nielsen, M.1
Justesen, S.2
Lund, O.3
Lundegaard, C.4
Buus, S.5
|