Patterns of DNA methylation throughout a range expansion of an introduced songbird

Integrative and Comparative Biology

Volumn 53, Issue 2, 2013, Pages 351-358

  Liebl, Andrea L ^a   Schrey, Aaron W ^a,b   Richards, Christina L ^a   Martin, Lynn B ^a  

^a UNIVERSITY OF SOUTH FLORIDA   (United States)

^b Armstrong State University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84880855913     PISSN: 15407063     EISSN: 15577023     Source Type: Journal    
DOI: 10.1093/icb/ict007     Document Type: Conference Paper

References (47)

1. Allendorf FW, Lundquist LL. 2003. Introduction: Population biology, evolution, and control of invasive species. Conserv Biol 17:24-30
2. Anderson TR. 2006. Biology of the ubiquitous house sparrow: From genes to populations. Oxford, UK: Oxford University Press
3. Angers B, Castonguay E, Massicotte R. 2010. Environmentally induced phenotypes and DNA methylation: How to deal with unpredictable conditions until the next generation and after. Mol Ecol 19:1283-95
4. Bonduriansky R, Day T. 2009. Nongenetic inheritance and its evolutionary implications. Annu Rev Ecol Evol Syst 40:103-25
5. Bossdorf O, Arcuri D, Richards CL, Pigliucci M. 2010. Experimental alteration of DNA methylation affects the phenotypic plasticity of ecologically relevant traits in Arabidopsis thaliana. Evol Ecol 24:541-53
6. Chwedorzewska KJ, Bednarek PT. 2012. Genetic and epigenetic variation in a cosmopolitan grass poa annua from antarctic and polish populations. Polish Polar Res 33:63-80
7. Cohen J. 1988. Statistical power analysis for the behavioral sciences. New Jersey: Lawrence Erlbaum Associates
8. Day T, Bonduriansky R. 2011. A unified approach to the evolutionary consequences of genetic and nongenetic inheritance. Am Nat 178:E18-36
9. Dolinoy DC, Huang D, Jirtle RL. 2007. Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development. Proc Natl Acad Sci USA 104:13056-61
10. Gao L, Geng Y, Li B, Chen J, Yang J. 2010. Genome-wide DNA methylation alterations of alternanthera philoxeroides in natural and manipulated habitats: Implications for epigenetic regulation of rapid responses to environmental fluctuation and phenotypic variation. Plant Cell Environ 33:1820-7
11. Geoghegan JL, Spencer HG. 2012. Population-epigenetic models of selection. Theor Popul Biol 81:232-42
12. Herrera CM, Bazaga P. 2011. Untangling individual variation in natural populations: Ecological, genetic and epigenetic correlates of long-term inequality in herbivory. Mol Ecol 20:1675-88
13. Herrera CM, Pozo MI, Bazaga P. 2012. Jack of all nectars, master of most: DNA methylation and the epigenetic basis of niche width in a flower-living yeast. Mol Ecol 12:2102-16
14. Jablonka E, Lamb MJ. 1989. The inheritance of acquired epigenetic variations. J Theor Biol 139:69-83
15. Jablonka E, Lamb MJ. 1998. Epigenetic inheritance in evolution. J Evol Biol 11:159-83
16. Jablonka E, Raz G. 2009. Transgenerational epigenetic inheritance: Prevalence, mechanisms, and implications for the study of heredity and evolution. Q Rev Biol 84:131-76
17. Johnston RF, Selander RK. 1971. Evolution of the house sparrow. II. Adaptive differentiation in North American Populations. Evolution 25:1-28
18. Kalisz S, Purugganan MD. 2004. Epialleles via DNA methylation: Consequences for plant evolution. Trends Ecol Evol 19:309-14
19. Kucharski R, Maleszka J, Foret S, Maleszka R. 2008. Nutritional control of reproductive status in honeybees via DNA methylation. Science 319:1827-30
20. Liebl AL, Martin LB. 2012. Exploratory behaviour and stressor hyper-responsiveness facilitate range expansion of an introduced songbird. Proc R Soc B Biol Sci 279:4375-81
21. Liebl AL, Martin LB. Forthcoming 2013. Stress hormone receptors change as range expansion progresses in house sparrows. Biology Letters
22. Liu S, Sun K, Jiang T, Ho J, Liu B, Feng J. 2012. Natural epigenetic variation in the female great roundleaf bat (hipposideros armiger) populations. Mol Genet Genomics 287:643-50
23. Martin LB, Fitzgerald L. 2005. A taste for novelty in invading house sparrows, Passer domesticus. Behav Ecol 16:702-7
24. Martin LB, Gilliam J, Han P, Lee K, Wikelski M. 2005. Corticosterone suppresses cutaneous immune function in temperate but not tropical house sparrows, Passer domesticus. Gen Comp Endocrinol 140:126-35
25. Massicotte R, Angers B. 2012. General-purpose genotype or how epigenetics extend the flexibility of a genotype. Genet Res Int 2012:7
26. Massicotte R, Whitelaw E, Angers B. 2011. DNA methylation: A source of random variation in natural populations. Epigenetics 6:421-7
27. Mora'n P, Pe'rez-Figueroa A. 2011. Methylation changes associated with early maturation stages in the Atlantic salmon. BMC Genet 12:86
28. Pá l C, Mikló s I. 1999. Epigenetic inheritance, genetic assimilation and speciation. J Theor Biol 200:19-37
29. Peakall R, Smouse PE. 2006. Genalex 6: Genetic analysis in excel. Population genetic software for teaching and research. Mol Ecol Notes 6:288-95
30. Perez JE, Nirchio M, Alfonsi C, Munoz C. 2006. The biology of invasions: The genetic adaptation paradox. Biol Inv 8:1115-21
31. Price TD, Qvarnstrom A, Irwin DE. 2003. The role of phenotypic plasticity in driving genetic evolution. Proc R Soc B Biol Sci 270:1433-40
32. Rando OJ, Verstrepen KJ. 2007. Timescales of genetic and epigenetic inheritance. Cell 128:655-68
33. Rapp RA, Wendel JF. 2005. Epigenetics and plant evolution. New Phytol 168:81-91
34. Reyna-Lopez G, Simpson J, Ruiz-Herrera J. 1997. Differences in DNA methylation patterns are detectable during the dimorphic transition of fungi by amplification of restriction polymorphisms. Mol Gen Genet MGG 253:703-10
35. Rice WR. 1989. Analizing tables of statistical tests. Evolution 43:223-5
36. Richards CL, Bossdorf O, Pigliucci M 2010. What role does heritable epigenetic variation play in phenotypic evolutioñ BioScience 60:232-7
37. Richards CL, Schrey AW, Pigliucci M. 2012. Invasion of diverse habitats by few japanese knotweed genotypes is correlated with epigenetic differentiation. Ecol Lett 15:1016-25
38. Richards EJ. 2006. Inherited epigenetic variation - revisiting soft inheritance. Nat Rev Genet 7:395-401
39. Russell DW, Sambrook J. 2001. Molecular cloning. A laboratory manual Cold Spring Harbor (NY): Cold Spring Harbor Laboratory Press
40. Salmon A, Clotault J, Jenczewski E, Chable V, Manzanares- Dauleux MJ. 2008. Brassica oleracea displays a high level of DNA methylation polymorphism. Plant Sci 174:61-70
41. Schrey A, Coon CAC, Grispo M, Awad M, Imboma T, Mccoy E, Mushinsky H, Richards CL, Martin LB. 2012. Epigenetic variation may compensate for decreased genetic variation with introductions: A case study using house sparrows (Passer domesticus) on two continents. Genet Res Int 2012
42. Schrey A, Grispo M, Awad M, Cook M, Mccoy E, Mushinsky H, Albayrak T, Bensch S, Burke T, Butler L. 2011. Broad-scale latitudinal patterns of genetic diversity among native european and introduced house sparrow (Passer domesticus) populations. Mol Ecol 20:1133-43
43. Vergeer P, Ouborg NJ. 2012. Evidence for an epigenetic role in inbreeding depression. Biol Lett 8:798-801
44. Verhoeven KJ, Van Dijk PJ, Biere A. 2010. Changes in genomic methylation patterns during the formation of triploid asexual dandelion lineages. Mol Ecol 19:315-24
45. Vogt G, Huber M, Thiemann M, van den Boogaart G, Schmitz OJ, Schubart CD. 2008. Production of different phenotypes from the same genotype in the same environment by developmental variation. J Exp Biol 211:510-23
46. West Eberhard MJ. 2003. Developmental plasticity and evolution. New York: Oxford University Press
47. Zhang Y-Y, Fischer M, Colot V, Bossdorf O. 2013. Epigenetic variation creates potential for evolution of plant phenotypic plasticity. New Phytol 197:314-22