A large-scale introgression of genomic components of Brassica rapa into B. napus by the bridge of hexaploid derived from hybridization between B. napus and B. oleracea

Theoretical and Applied Genetics

Volumn 126, Issue 8, 2013, Pages 2073-2080

  Li, Qinfei ^a   Mei, Jiaqin ^a   Zhang, Yongjing ^a   Li, Jiana ^a   Ge, Xianhong ^b   Li, Zaiyun ^b   Qian, Wei ^a  

^a SOUTHWEST UNIVERSITY   (China)

^b HUAZHONG AGRICULTURAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BRASSICA RAPA; CHROMOSOME SEGREGATION; GENETIC VARIATION; GENOMIC COMPONENTS; OIL SEED CROPS; OPEN POLLINATION; POLLEN FERTILITY; SIMPLE SEQUENCE-REPEAT MARKERS;

GENES;

PLANTS (BOTANY);

BRASSICA RAPA;

MICROSATELLITE DNA;

ARTICLE; BRASSICA RAPA; BREEDING; CROSS BREEDING; FLOWER; GENETIC VARIABILITY; GENETICS; METHODOLOGY; PLANT CHROMOSOME; PLANT GENOME; PLANT SEED; RAPESEED;

BRASSICA NAPUS; BRASSICA RAPA; BREEDING; CHROMOSOMES, PLANT; CROSSES, GENETIC; FLOWERS; GENETIC VARIATION; GENOME, PLANT; MICROSATELLITE REPEATS; SEEDS;

EID: 84880792627     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-013-2119-4     Document Type: Article

References (51)

1. Allender C, King G (2010) Origins of the amphiploid species Brassica napus L. investigated by chloroplast and nuclear molecular markers. BMC Plant Biol 10: 54.
2. Becker H, Engqvist G, Karlsson B (1995) Comparison of rapeseed cultivars and resynthesized lines based on allozyme and RFLP markers. Theor Appl Genet 91: 62-67.
3. Bus A, Körber N, Snowdon RJ, Stich B (2011) Patterns of molecular variation in a species-wide germplasm set of Brassica napus. Theor Appl Genet 123: 1413-1423.
4. Chen ZJ (2010) Molecular mechanisms of polyploidy and hybrid vigor. Trends Plant Sci 15: 57-71.
5. Cheung F, Trick M, Drou N, Lim YP, Park JY, Kwon SJ, Kim JA, Scott R, Pires JC, Paterson AH, Town C, Bancroft I (2009) Comparative analysis between homoeologous genome segments of Brassica napus and its progenitor species reveals extensive sequence-level divergence. Plant Cell 21: 1912-1928.
6. Cifuentes M, Eber F, Lucas MO, Lode M, Chèvre AM, Jenczewski E (2010) Repeated polyploidy drove different levels of crossover suppression between homoeologous chromosomes in Brassica napus allohaploids. Plant Cell 22: 2265-2276.
7. Diers BW, Osborn TC (1994) Genetic diversity of oilseed Brassica napus germplasm based on restriction fragment length polymorphisms. Theor Appl Genet 88: 662-668.
8. Federico I, Maria F (2011) The genetics of Brassica napus L. In: Bancroft I, Schmidt R (eds) Genetics and genomics of the Brassicaceae. Springer, New York Dordrecht Heidelberg London, pp 261-291.
9. Fujii K, Ohmido N (2011) Stable progeny production of the amphidiploid resynthesized Brassica napus cv. Hanakkori, a newly bred vegetable. Theor Appl Genet 123: 1433-1443.
10. Gaeta RT, Pires JC, Iniguez-Luy F, Leon E, Osborn TC (2007) Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype. Plant Cell 19: 3403-3417.
11. Gaeta RT, Yoo SY, Pires JC, Doerge RW, Chen ZJ, Osborn TC (2009) Analysis of gene expression in resynthesized Brassica napus allopolyploids using Arabidopsis 70mer oligo microarrays. PLoS ONE 4(3): e4760.
12. Girke A, Schierholt A, Becker HC (2012) Extending the rapeseed gene-pool with resynthesized Brassica napus L. I: genetic diversity. Genet Resour Crop Evol 59: 1441-1447.
13. Gómez-Campo C (1999) Biology of Brassica coenospecies. Elsevier, Amsterdam Lausanne New York Oxford Shannon Singapore Tokyo.
14. Hasan M, Seyis F, Badani AG, Pons-Kühnemann J, Friedt W, Lühs W, Snowdon RJ (2006) Analysis of genetic diversity in the Brassica napus L. gene pool using SSR markers. Genet Resour Crop Evol 53: 793-802.
15. Howell EC, Barker GC, Jones GH, Kearsey MJ, King GJ, Kop EP, Ryder CD, Teakle GR, Vicente JG, Armstrong SJ (2002) Integration of the cytogenetic and genetic linkage maps of Brassica oleracea. Genetics 161: 1225-1234.
16. Huettel B, Kreil DP, Matzke M, Matzke AJM (2008) Effects of aneuploidy on genome structure, expression, and interphase organization in Arabidopsis thaliana. PLoS Genet 4(10): e1000226.
17. Jenczewski E, Eber F, Grimaud A, Huet S, Lucas MO, Monod H, Chèvre AM (2003) PrBn, a major gene controlling homeologous pairing in oilseed rape (Brassica napus) haploids. Genetics 164: 645-653.
18. Leitch IJ, Heslop-Harrison JSP (1994) Detection of digoxigenin-labeled DNA probes hybridized to plant chromosomes in situ. Methods Mol Biol 28: 177-185.
19. Liu HL (2000) Genetics and breeding in rapeseed. Chinese Agricultural Universitatis Press, Beijing.
20. Liu Z, Adamczyk K, Manzanares-Dauleux M, Eber F, Lucas MO, Delourme R, Chèvre AM, Jenczewski E (2006) Mapping PrBn and other quantitative trait loci responsible for the control of homeologous chromosome pairing in oilseed rape (Brassica napus L.) haploids. Genetics 174: 1583-1596.
21. Lukens LN, Pires JC, Leon E, Vogelzang R, Oslach L, Osborn T (2006) Patterns of sequence loss and cytosine methylation within a population of newly resynthesized Brassica napus allopolyploids. Plant Physiol 140: 336-348.
22. Malek MA, Ismail MR, Rafii MY, Rahman M (2012) Synthetic Brassica napus L.: development and studies on morphological characters, yield attributes, and yield. Sci World J 2012: 416901.
23. Mei J, Li Q, Qian L, Fu Y, Li J, Frauen M, Qian W (2011a) Genetic investigation of the origination of allopolyploid with virtually synthesized lines: application to the C subgenome of Brassica napus. Heredity 106: 955-961.
24. Mei J, Fu Y, Qian L, Xu X, Li J, Qian W (2011b) Effectively widening the gene pool of oilseed rape (Brassica napus L.) by using Chinese B. rapa in a 'virtual allopolyploid' approach. Plant Breed 130: 333-337.
25. Mei J, Ding Y, Lu K, Wei D, Liu Y, Disi J, Li J, Liu L, Liu S, Mckay J, Qian W (2013) Identification of genomic regions involved in resistance against Sclerotinia sclerotiorum from wild Brassica oleracea. Thero Appl Genet 126: 549-556.
26. Nei M (1973) Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci 70: 3321-3323.
27. Nei M, Li WH (1979) Mathematical model for studying genetic variation in terms of restriction endouncleases. Proc Natl Acad Sci 76: 5269-5273.
28. Nicolas SD, Leflon M, Monod H, Eber F, Coriton O, Huteau V, Chèvre AM, Jenczewski E (2009) Genetic regulation of meiotic cross-overs between related genomes in Brassica napus haploids and hybrids. Plant Cell 21: 373-385.
29. Piquemal J, Cinquin E, Couton F, Rondeau C, Seignoret E, Doucet I, Perret D, Villeger MJ, Vincourt P, Blanchard P (2005) Construction of an oilseed rape (Brassica napus L.) genetic map with SSR markers. Thero Appl Genet 111: 1514-1523.
30. Qian W, Liu R, Meng J (2003) Genetic effects on biomass in interspecific hybrids between Brassica napus and B. rapa. Euphytica 134: 9-15.
31. Qian W, Chen X, Fu D, Zou J, Meng J (2005) Intersubgenomic heterosis in seed yield potential observed in a new type of Brassica napus introgressed with partial Brassica rapa genome. Theor Appl Genet 110: 1187-1194.
32. Qian W, Meng J, Li M, Frauen M, Sass O, Noack J, Jung C (2006) Introgression of genomic components from Chinese Brassica rapa contributes to widening the genetic diversity in rapeseed (B. napus L.), with emphasis on the evolution of Chinese rapeseed. Theor Appl Genet 113: 49-54.
33. Rohlf FJ (1997) NTSYS-pc 2. 1. Numerical taxonomy and multivariate analysis system. Exeter Software. Setauket, NY.
34. Salmon A, Flagel L, Ying B, Udall JA, Wendel JF (2010) Homoeologous nonreciprocal recombination in polyploid cotton. New Phytol 186: 123-134.
35. Sánchez-Morán E, Benavente E, Orellana J (2001) Analysis of karyotypic stability of homoeologous-pairing (ph) mutants in allopolyploid wheats. Chromosoma 110: 371-377.
36. Seyis F, Snowdon RJ, Luhs W, Friedt W (2003) Molecular characterization of novel resynthesized rapeseed (Brassica napus) lines and analysis of their genetic diversity in comparison with spring rapeseed cultivars. Plant Breed 122: 473-478.
37. Shi JQ, Li RY, Qiu D, Jiang CC, Long Y, Morgan C, Bancroft I, Zhao JY, Meng JL (2009) Unraveling the complex trait of crop yield with quantitative trait loci mapping in Brassica napus. Genetics 182(3): 851-861.
38. Song K, Lu P, Tang K, Osborn TC (1995) Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution. Proc Natl Acad Sci USA 92: 7719-7723.
39. Szadkowski E, Eber F, Huteau V, Lodé M, Huneau C, Belcram H, Coriton O, Manzanares-Dauleux MJ, Delourme R, King GJ, Chalhoub B, Jenczewski E, Chèvre AM (2010) The first meiosis of resynthesized Brassica napus, a genome blender. New Phytol 186: 102-112.
40. Szadkowski E, Eber F, Huteau V, Lodé M, Coriton O, Jenczewski E, Chèvre AM (2011) Polyploid formation pathways have an impact on genetic rearrangements in resynthesized Brassica napus. New Phytol 191: 884-894.
41. Tian ET, Jiang YF, Chen LL, Zou J, Liu F, Meng JL (2010) Synthesis of a Brassica trigenomic allohexaploid (B. carinata × B. rapa) de novo and its stability in subsequent generations. Theor Appl Genet 121: 1431-1440.
42. U N (1935) Genome analysis in Brassica with special reference to the experimental formation of B. napus and peculiar mode of fertilization. Jpn J Bot 7: 389-452.
43. Wen J, Tu JX, Li ZY, Fu TD, Ma CZ, Shen JX (2008) Improving ovary and embryo culture techniques for efficient resynthesis of Brassica napus from reciprocal crosses between yellow-seeded diploids B. rapa and B. oleracea. Euphytica 162: 81-89.
44. Wen J, Zeng X, Pu Y, Qi L, Li Z, Tu J, Ma C, Shen J, Fu T (2010) Meiotic nondisjunction in resynthesized Brassica napus and generation of aneuploids through microspore culture and their characterization. Euphytica 173: 99-111.
45. Wolfe KH (2001) Yesterday's polyploids and the mystery of diploidization. Nat Rev Genet 2: 333-341.
46. Wright KM, Pires JC, Madlung A (2009) Mitotic instability in resynthesized and natural polyploids of the genus Arabidopsis (Brassicaceae). Am J Bot 96: 1656-1664.
47. Xiong ZY, Gaeta RT, Pires JC (2011) Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus. Proc Natl Acad Sci USA 108: 7908-7913.
48. Xu YH, Xu H, Wu XM, Fang XP, Wang JB (2012) Genetic changes following hybridization and genome doubling in synthetic Brassica napus. Biochem Genet 50: 616-624.
49. Yao JL, Yang PF, Hu CG, Zhang YD, Luo BS (2004) Embryological evidence of apomixis in Eulaliopsis binata. Acta Bot Sin 46: 86-92.
50. Zhao JJ, Wang XW, Deng B, Lou P, Wu J, Sun RF, Xu ZY, Vromans J, Koornneef M, Bonnema G (2005) Genetic relationships within Brassica rapa as inferred from AFLP fingerprints. Theor Appl Genet 110: 1301-1314.
51. Zou J, Zhu J, Huang S, Tian E, Xiao Y, Fu D, Tu J, Fu T, Meng J (2010) Broadening the avenue of intersubgenomic heterosis in oilseed Brassica. Theor Appl Genet 120: 283-290.