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Volumn 5, Issue 6, 2013, Pages 1176-1184

Clustering Acinetobacter strains by optical mapping

Author keywords

Epidemiology; Genome alignment; Optical mapping

Indexed keywords

ACINETOBACTER; ACINETOBACTER INFECTIONS; BACTERIAL GENOME; BACTERIUM IDENTIFICATION; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; GENETICS; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; PROCEDURES; RESTRICTION MAPPING; ACINETOBACTER INFECTION; ARTICLE; EPIDEMIOLOGY; GENOME ALIGNMENT; METHODOLOGY; OPTICAL MAPPING;

EID: 84880741494     PISSN: None     EISSN: 17596653     Source Type: Journal    
DOI: 10.1093/gbe/evt085     Document Type: Article
Times cited : (3)

References (18)
  • 1
    • 79953902020 scopus 로고    scopus 로고
    • Comparative supragenomic analyses among the pathogens Staphylococcus aureus, Streptococcus pneumoniae, and Haemophilus influenzae using a modification of the finite supragenome model
    • Boissy R, et al. 2011. Comparative supragenomic analyses among the pathogens Staphylococcus aureus, Streptococcus pneumoniae, and Haemophilus influenzae using a modification of the finite supragenome model. BMC Genomics 12:187.
    • (2011) BMC Genomics , vol.12 , pp. 187
    • Boissy, R.1
  • 2
    • 13144259632 scopus 로고    scopus 로고
    • High-resolution restriction maps of bacterial artificial chromosomes constructed by optical mapping
    • Cai W, et al. 1998. High-resolution restriction maps of bacterial artificial chromosomes constructed by optical mapping. Proc Natl Acad Sci USA. 95:3390-3395.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 3390-3395
    • Cai, W.1
  • 4
    • 32944456498 scopus 로고    scopus 로고
    • Phylogenetic analysis as a tool in molecular epidemiology of infectious diseases
    • Hall BG, Barlow M. 2006. Phylogenetic analysis as a tool in molecular epidemiology of infectious diseases. Ann Epidemiol. 16:157-169.
    • (2006) Ann Epidemiol. , vol.16 , pp. 157-169
    • Hall, B.G.1    Barlow, M.2
  • 5
    • 77950671568 scopus 로고    scopus 로고
    • Pan-genome analysis provides much higher strain typing resolution than multi-locus sequence typing
    • Hall BG, Ehrlich GD, Hu FZ. 2010. Pan-genome analysis provides much higher strain typing resolution than multi-locus sequence typing. Microbiology 156:1060-1068.
    • (2010) Microbiology , vol.156 , pp. 1060-1068
    • Hall, B.G.1    Ehrlich, G.D.2    Hu, F.Z.3
  • 6
    • 36549020646 scopus 로고    scopus 로고
    • Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: Insights into the pneumococcal supragenome
    • Hiller NL, et al. 2007. Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome. J Bacteriol. 189:8186-8195.
    • (2007) J Bacteriol. , vol.189 , pp. 8186-8195
    • Hiller, N.L.1
  • 7
    • 36549029848 scopus 로고    scopus 로고
    • Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains
    • Hogg JS, et al. 2007. Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains. Genome Biol. 8:R103.
    • (2007) Genome Biol. , vol.8
    • Hogg, J.S.1
  • 8
    • 13144251116 scopus 로고    scopus 로고
    • Automated high resolution optical mapping using arrayed, fluid-fixed DNA molecules
    • Jing J, et al. 1998. Automated high resolution optical mapping using arrayed, fluid-fixed DNA molecules. Proc Natl Acad Sci USA. 95:8046-8051.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 8046-8051
    • Jing, J.1
  • 9
    • 61349194462 scopus 로고    scopus 로고
    • Estimating the size of the bacterial pangenome
    • Lapierre P, Gogarten JP. 2009. Estimating the size of the bacterial pangenome. Trends Genet. 25:107-110.
    • (2009) Trends Genet. , vol.25 , pp. 107-110
    • Lapierre, P.1    Gogarten, J.P.2
  • 10
    • 34548846699 scopus 로고    scopus 로고
    • Evolution of the core and pan-genome of Streptococcus: Positive selection, recombination, and genome composition
    • Lefebure T, Stanhope MJ. 2007. Evolution of the core and pan-genome of Streptococcus: positive selection, recombination, and genome composition. Genome Biol. 8:R71.
    • (2007) Genome Biol. , vol.8
    • Lefebure, T.1    Stanhope, M.J.2
  • 11
    • 30744457635 scopus 로고    scopus 로고
    • Microarrays reveal that each of the ten dominant lineages of Staphylococcus aureus has a unique combination of surface-associated and regulatory genes
    • Lindsay JA, et al. 2006. Microarrays reveal that each of the ten dominant lineages of Staphylococcus aureus has a unique combination of surface-associated and regulatory genes. J Bacteriol. 188:669-676.
    • (2006) J Bacteriol. , vol.188 , pp. 669-676
    • Lindsay, J.A.1
  • 12
    • 84863323371 scopus 로고    scopus 로고
    • Extracellular stress and lipopolysaccharide modulate Acinetobacterbaumanniisurface-associated motility
    • McQueary CN, et al. 2012. Extracellular stress and lipopolysaccharide modulate Acinetobacterbaumanniisurface-associated motility. J Microbiol. 50:434-443.
    • (2012) J Microbiol. , vol.50 , pp. 434-443
    • McQueary, C.N.1
  • 13
    • 0032904916 scopus 로고    scopus 로고
    • Principles and applications of methods for DNA-based typing of microbial organisms
    • Olive DM, Bean P. 1999. Principles and applications of methods for DNA-based typing of microbial organisms. J Clin Microbiol. 37:1661-1669.
    • (1999) J Clin Microbiol. , vol.37 , pp. 1661-1669
    • Olive, D.M.1    Bean, P.2
  • 14
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 15
    • 80053498320 scopus 로고    scopus 로고
    • Inadequacies of minimum spanning trees in molecular epidemiology
    • Salipante SJ, Hall BG. 2011. Inadequacies of minimum spanning trees in molecular epidemiology. J Clin Microbiol. 49:3568-3575.
    • (2011) J Clin Microbiol. , vol.49 , pp. 3568-3575
    • Salipante, S.J.1    Hall, B.G.2
  • 16
    • 25444524604 scopus 로고    scopus 로고
    • Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: Implications for the microbial "pan-genome"
    • Tettelin H, et al. 2005. Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan- genome". Proc Natl Acad Sci U S A. 102:13950-13955.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 13950-13955
    • Tettelin, H.1
  • 18
    • 40449093894 scopus 로고    scopus 로고
    • Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray
    • Willenbrock H, Hallin PF, Wassenaar TM, Ussery DW. 2007. Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray. Genome Biol. 8:R267.
    • (2007) Genome Biol. , vol.8
    • Willenbrock, H.1    Hallin, P.F.2    Wassenaar, T.M.3    Ussery, D.W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.