메뉴 건너뛰기




Volumn 13, Issue 14, 2013, Pages 2140-2161

The response of bacillus licheniformis to heat and ethanol stress and the role of the sigb regulon

Author keywords

Bacillus licheniformis; Ethanol stress; Heat stress; Microbiology; sigB mutant; Transcriptome

Indexed keywords

SIGMA FACTOR; TRYPTOPHAN;

EID: 84880608942     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.201200297     Document Type: Article
Times cited : (21)

References (45)
  • 1
    • 20444429605 scopus 로고    scopus 로고
    • Prevalence and genetic diversity of Bacillus licheniformis in avian plumage
    • Whitaker, J. M., Cristol, D. A., Forsyth, M. H., Prevalence and genetic diversity of Bacillus licheniformis in avian plumage. J. Field Ornithol. 2005, 76, 264-270.
    • (2005) J. Field Ornithol. , vol.76 , pp. 264-270
    • Whitaker, J.M.1    Cristol, D.A.2    Forsyth, M.H.3
  • 2
    • 0035209219 scopus 로고    scopus 로고
    • Global transcriptional response of Bacillus subtilis to heat shock
    • Helmann, J. D., Wu, M. F., Kobel, P. A., Gamo, F. J. et al., Global transcriptional response of Bacillus subtilis to heat shock. J. Bacteriol. 2001, 183, 7318-7328.
    • (2001) J. Bacteriol. , vol.183 , pp. 7318-7328
    • Helmann, J.D.1    Wu, M.F.2    Kobel, P.A.3    Gamo, F.J.4
  • 3
    • 51949087754 scopus 로고    scopus 로고
    • Convergence of molecular, modeling, and systems approaches for an understanding of the Escherichia coli heat shock response
    • Guisbert, E., Yura, T., Rhodius, V. A., Gross, C. A., Convergence of molecular, modeling, and systems approaches for an understanding of the Escherichia coli heat shock response. Microbiol. Mol. Biol. Rev. 2008, 72, 545-554.
    • (2008) Microbiol. Mol. Biol. Rev. , vol.72 , pp. 545-554
    • Guisbert, E.1    Yura, T.2    Rhodius, V.A.3    Gross, C.A.4
  • 4
    • 0345306712 scopus 로고    scopus 로고
    • The Bacillus subtilis heat shock stimulon
    • Schumann, W., The Bacillus subtilis heat shock stimulon. Cell Stress Chaperones 2003, 8, 207-217.
    • (2003) Cell Stress Chaperones , vol.8 , pp. 207-217
    • Schumann, W.1
  • 5
    • 77953125166 scopus 로고    scopus 로고
    • Global transcriptional analysis of Bacillus licheniformis reveals an overlap between heat shock and iron limitation stimulon
    • Nielsen, A. K., Breuner, A., Krzystanek, M., Andersen, J. T. et al., Global transcriptional analysis of Bacillus licheniformis reveals an overlap between heat shock and iron limitation stimulon. J. Mol. Microbiol. Biotechnol. 2010, 18, 162-173.
    • (2010) J. Mol. Microbiol. Biotechnol. , vol.18 , pp. 162-173
    • Nielsen, A.K.1    Breuner, A.2    Krzystanek, M.3    Andersen, J.T.4
  • 6
    • 84858286603 scopus 로고    scopus 로고
    • DnaK and GroEL chaperones are recruited to the Bacillus subtilis membrane after short-term ethanol stress
    • Seydlova, G., Halada, P., Fiser, R., Toman, O. et al., DnaK and GroEL chaperones are recruited to the Bacillus subtilis membrane after short-term ethanol stress. J. Appl. Microbiol. 2012, 112, 765-774.
    • (2012) J. Appl. Microbiol. , vol.112 , pp. 765-774
    • Seydlova, G.1    Halada, P.2    Fiser, R.3    Toman, O.4
  • 7
    • 0038624444 scopus 로고    scopus 로고
    • SigM, an extracytoplasmic function sigma factor of Bacillus subtilis, is activated in response to cell wall antibiotics, ethanol, heat, acid, and superoxide stress
    • Thackray, P. D., Moir, A., SigM, an extracytoplasmic function sigma factor of Bacillus subtilis, is activated in response to cell wall antibiotics, ethanol, heat, acid, and superoxide stress. J. Bacteriol. 2003, 185, 3491-3498.
    • (2003) J. Bacteriol. , vol.185 , pp. 3491-3498
    • Thackray, P.D.1    Moir, A.2
  • 8
    • 0027331361 scopus 로고
    • Stress-induced activation of the sigma B transcription factor of Bacillus subtilis
    • Boylan, S. A., Redfield, A. R., Brody, M. S., Price, C. W., Stress-induced activation of the sigma B transcription factor of Bacillus subtilis. J. Bacteriol. 1993, 175, 7931-7937.
    • (1993) J. Bacteriol. , vol.175 , pp. 7931-7937
    • Boylan, S.A.1    Redfield, A.R.2    Brody, M.S.3    Price, C.W.4
  • 9
    • 0034072580 scopus 로고    scopus 로고
    • The clp proteases of Bacillus subtilis are directly involved in degradation of misfolded proteins
    • Kruger, E., Witt, E., Ohlmeier, S., Hanschke, R. et al., The clp proteases of Bacillus subtilis are directly involved in degradation of misfolded proteins. J. Bacteriol. 2000, 182, 3259-3265.
    • (2000) J. Bacteriol. , vol.182 , pp. 3259-3265
    • Kruger, E.1    Witt, E.2    Ohlmeier, S.3    Hanschke, R.4
  • 10
    • 0034982311 scopus 로고    scopus 로고
    • Microbial molecular chaperones
    • Lund, P. A., Microbial molecular chaperones. Adv. Microb. Physiol. 2001, 44, 93-140.
    • (2001) Adv. Microb. Physiol. , vol.44 , pp. 93-140
    • Lund, P.A.1
  • 11
    • 4344696027 scopus 로고    scopus 로고
    • The ClpP peptidase is the major determinant of bulk protein turnover in Bacillus subtilis
    • Kock, H., Gerth, U., Hecker, M., The ClpP peptidase is the major determinant of bulk protein turnover in Bacillus subtilis. J. Bacteriol. 2004, 186, 5856-5864.
    • (2004) J. Bacteriol. , vol.186 , pp. 5856-5864
    • Kock, H.1    Gerth, U.2    Hecker, M.3
  • 12
    • 33745434063 scopus 로고    scopus 로고
    • Involvement of Bacillus subtilis ClpE in CtsR degradation and protein quality control
    • Miethke, M., Hecker, M., Gerth, U., Involvement of Bacillus subtilis ClpE in CtsR degradation and protein quality control. J. Bacteriol. 2006, 188, 4610-4619.
    • (2006) J. Bacteriol. , vol.188 , pp. 4610-4619
    • Miethke, M.1    Hecker, M.2    Gerth, U.3
  • 14
    • 77955568209 scopus 로고    scopus 로고
    • Facilitation of direct conditional knockout of essential genes in Bacillus licheniformis DSM13 by comparative genetic analysis and manipulation of genetic competence
    • Hoffmann, K., Wollherr, A., Larsen, M., Rachinger, M. et al., Facilitation of direct conditional knockout of essential genes in Bacillus licheniformis DSM13 by comparative genetic analysis and manipulation of genetic competence. Appl. Environ. Microbiol. 2010, 76, 5046-5057.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 5046-5057
    • Hoffmann, K.1    Wollherr, A.2    Larsen, M.3    Rachinger, M.4
  • 15
    • 0027524789 scopus 로고
    • Temporal activation of beta-glucanase synthesis in Bacillus subtilis is mediated by the GTP pool
    • Stülke, J., Hanschke, R., Hecker, M., Temporal activation of beta-glucanase synthesis in Bacillus subtilis is mediated by the GTP pool. J. Gen. Microbiol. 1993, 139, 2041-2045.
    • (1993) J. Gen. Microbiol. , vol.139 , pp. 2041-2045
    • Stülke, J.1    Hanschke, R.2    Hecker, M.3
  • 16
    • 33745697827 scopus 로고    scopus 로고
    • The phosphate-starvation response of Bacillus licheniformis
    • Hoi le, T., Voigt, B., Jürgen, B., Ehrenreich, A. et al., The phosphate-starvation response of Bacillus licheniformis. Proteomics 2006, 6, 3582-3601.
    • (2006) Proteomics , vol.6 , pp. 3582-3601
    • Hoi le, T.1    Voigt, B.2    Jürgen, B.3    Ehrenreich, A.4
  • 17
    • 0027153932 scopus 로고
    • Regulation of sigma B levels and activity in Bacillus subtilis
    • Benson, A. K., Haldenwang, W. G., Regulation of sigma B levels and activity in Bacillus subtilis. J. Bacteriol. 1993, 175, 2347-2356.
    • (1993) J. Bacteriol. , vol.175 , pp. 2347-2356
    • Benson, A.K.1    Haldenwang, W.G.2
  • 18
    • 0029871347 scopus 로고    scopus 로고
    • PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae
    • Wach, A., PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae. Yeast 1996, 12, 259-265.
    • (1996) Yeast , vol.12 , pp. 259-265
    • Wach, A.1
  • 19
    • 27944453600 scopus 로고    scopus 로고
    • Virtual Footprint and PRODORIC: an integrative framework for regulon prediction in prokaryotes
    • Münch, R., Hiller, K., Grote, A., Scheer, M. et al., Virtual Footprint and PRODORIC: an integrative framework for regulon prediction in prokaryotes. Bioinformatics 2005, 21, 4187-4189.
    • (2005) Bioinformatics , vol.21 , pp. 4187-4189
    • Münch, R.1    Hiller, K.2    Grote, A.3    Scheer, M.4
  • 20
    • 0037250153 scopus 로고    scopus 로고
    • PRODORIC: prokaryotic database of gene regulation
    • Münch, R., Hiller, K., Barg, H., Heldt, D. et al., PRODORIC: prokaryotic database of gene regulation. Nucleic Acids Res. 2003, 31, 266-269.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 266-269
    • Münch, R.1    Hiller, K.2    Barg, H.3    Heldt, D.4
  • 21
    • 0034837018 scopus 로고    scopus 로고
    • A comprehensive two-dimensional map of cytosolic proteins of Bacillus subtilis
    • Buttner, K., Bernhardt, J., Scharf, C., Schmid, R. et al., A comprehensive two-dimensional map of cytosolic proteins of Bacillus subtilis. Electrophoresis 2001, 22, 2908-2935.
    • (2001) Electrophoresis , vol.22 , pp. 2908-2935
    • Buttner, K.1    Bernhardt, J.2    Scharf, C.3    Schmid, R.4
  • 22
    • 76649109593 scopus 로고    scopus 로고
    • Two-dimensional proteome reference map for the radiation-resistant bacterium Deinococcus geothermalis
    • Liedert, C., Bernhardt, J., Albrecht, D., Voigt, B. et al., Two-dimensional proteome reference map for the radiation-resistant bacterium Deinococcus geothermalis. Proteomics 2010, 10, 555-563.
    • (2010) Proteomics , vol.10 , pp. 555-563
    • Liedert, C.1    Bernhardt, J.2    Albrecht, D.3    Voigt, B.4
  • 23
    • 2442593658 scopus 로고    scopus 로고
    • A proteomic view of cell physiology of Bacillus licheniformis
    • Voigt, B., Schweder, T., Becher, D., Ehrenreich, A. et al., A proteomic view of cell physiology of Bacillus licheniformis. Proteomics 2004, 4, 1465-1490.
    • (2004) Proteomics , vol.4 , pp. 1465-1490
    • Voigt, B.1    Schweder, T.2    Becher, D.3    Ehrenreich, A.4
  • 24
    • 79959712563 scopus 로고    scopus 로고
    • The peroxide stress response of Bacillus licheniformis
    • Schroeter, R., Voigt, B., Jürgen, B., Methling, K. et al., The peroxide stress response of Bacillus licheniformis. Proteomics 2011, 11, 2851-2866.
    • (2011) Proteomics , vol.11 , pp. 2851-2866
    • Schroeter, R.1    Voigt, B.2    Jürgen, B.3    Methling, K.4
  • 25
    • 4644259296 scopus 로고    scopus 로고
    • The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential
    • Veith, B., Herzberg, C., Steckel, S., Feesche, J. et al., The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential. J. Mol. Microbiol. Biotechnol. 2004, 7, 204-211.
    • (2004) J. Mol. Microbiol. Biotechnol. , vol.7 , pp. 204-211
    • Veith, B.1    Herzberg, C.2    Steckel, S.3    Feesche, J.4
  • 26
    • 33646197928 scopus 로고    scopus 로고
    • Rosetta error model for gene expression analysis
    • Weng, L., Dai, H., Zhan, Y., He, Y. et al., Rosetta error model for gene expression analysis. Bioinformatics 2006, 22, 1111-1121.
    • (2006) Bioinformatics , vol.22 , pp. 1111-1121
    • Weng, L.1    Dai, H.2    Zhan, Y.3    He, Y.4
  • 27
    • 16844384949 scopus 로고    scopus 로고
    • Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis
    • Höper, D., Völker, U., Hecker, M., Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis. J. Bacteriol. 2005, 187, 2810-2826.
    • (2005) J. Bacteriol. , vol.187 , pp. 2810-2826
    • Höper, D.1    Völker, U.2    Hecker, M.3
  • 28
    • 0028292919 scopus 로고
    • CIRCE, a novel heat shock element involved in regulation of heat shock operon dnaK of Bacillus subtilis
    • Zuber, U., Schumann, W., CIRCE, a novel heat shock element involved in regulation of heat shock operon dnaK of Bacillus subtilis. J. Bacteriol. 1994, 176, 1359-1363.
    • (1994) J. Bacteriol. , vol.176 , pp. 1359-1363
    • Zuber, U.1    Schumann, W.2
  • 29
    • 78149281189 scopus 로고    scopus 로고
    • CtsR, the Gram-positive master regulator of protein quality control, feels the heat
    • Elsholz, A. K., Michalik, S., Zühlke, D., Hecker, M. et al., CtsR, the Gram-positive master regulator of protein quality control, feels the heat. EMBO J. 2010, 29, 3621-3629.
    • (2010) EMBO J. , vol.29 , pp. 3621-3629
    • Elsholz, A.K.1    Michalik, S.2    Zühlke, D.3    Hecker, M.4
  • 30
    • 0347622752 scopus 로고    scopus 로고
    • Fine-tuning in regulation of Clp protein content in Bacillus subtilis
    • Gerth, U., Kirstein, J., Mostertz, J., Waldminghaus, T. et al., Fine-tuning in regulation of Clp protein content in Bacillus subtilis. J. Bacteriol. 2004, 186, 179-191.
    • (2004) J. Bacteriol. , vol.186 , pp. 179-191
    • Gerth, U.1    Kirstein, J.2    Mostertz, J.3    Waldminghaus, T.4
  • 31
    • 0035788801 scopus 로고    scopus 로고
    • A novel two-component regulatory system in Bacillus subtilis for the survival of severe secretion stress
    • Hyyrylainen, H. L., Bolhuis, A., Darmon, E., Muukkonen, L. et al., A novel two-component regulatory system in Bacillus subtilis for the survival of severe secretion stress. Mol. Microbiol. 2001, 41, 1159-1172.
    • (2001) Mol. Microbiol. , vol.41 , pp. 1159-1172
    • Hyyrylainen, H.L.1    Bolhuis, A.2    Darmon, E.3    Muukkonen, L.4
  • 32
    • 0036786262 scopus 로고    scopus 로고
    • A novel class of heat and secretion stress-responsive genes is controlled by the autoregulated CssRS two-component system of Bacillus subtilis
    • Darmon, E., Noone, D., Masson, A., Bron, S. et al., A novel class of heat and secretion stress-responsive genes is controlled by the autoregulated CssRS two-component system of Bacillus subtilis. J. Bacteriol. 2002, 184, 5661-5671.
    • (2002) J. Bacteriol. , vol.184 , pp. 5661-5671
    • Darmon, E.1    Noone, D.2    Masson, A.3    Bron, S.4
  • 33
    • 0035139973 scopus 로고    scopus 로고
    • Putative sigma factor SigI (YkoZ) of Bacillus subtilis is induced by heat shock
    • Zuber, U., Drzewiecki, K., Hecker, M., Putative sigma factor SigI (YkoZ) of Bacillus subtilis is induced by heat shock. J. Bacteriol. 2001, 183, 1472-1475.
    • (2001) J. Bacteriol. , vol.183 , pp. 1472-1475
    • Zuber, U.1    Drzewiecki, K.2    Hecker, M.3
  • 34
    • 80054708828 scopus 로고    scopus 로고
    • Genetic evidence for involvement of the alternative sigma factor SigI in controlling expression of the cell wall hydrolase gene lytE and contribution of LytE to heat survival of Bacillus subtilis
    • Tseng, C. L., Chen, J. T., Lin, J. H., Huang, W. Z. et al., Genetic evidence for involvement of the alternative sigma factor SigI in controlling expression of the cell wall hydrolase gene lytE and contribution of LytE to heat survival of Bacillus subtilis. Arch. Microbiol. 2011, 193, 677-685.
    • (2011) Arch. Microbiol. , vol.193 , pp. 677-685
    • Tseng, C.L.1    Chen, J.T.2    Lin, J.H.3    Huang, W.Z.4
  • 35
    • 33748358169 scopus 로고    scopus 로고
    • Proteome signatures for stress and starvation in Bacillus subtilis as revealed by a 2-D gel image color coding approach
    • Tam le, T., Antelmann, H., Eymann, C., Albrecht, D. et al., Proteome signatures for stress and starvation in Bacillus subtilis as revealed by a 2-D gel image color coding approach. Proteomics 2006, 6, 4565-4585.
    • (2006) Proteomics , vol.6 , pp. 4565-4585
    • Tam le, T.1    Antelmann, H.2    Eymann, C.3    Albrecht, D.4
  • 36
    • 79953323267 scopus 로고    scopus 로고
    • Cannibalism: a social behavior in sporulating Bacillus subtilis
    • Gonzalez-Pastor, J. E., Cannibalism: a social behavior in sporulating Bacillus subtilis. FEMS Microbiol. Rev. 2011, 35, 415-424.
    • (2011) FEMS Microbiol. Rev. , vol.35 , pp. 415-424
    • Gonzalez-Pastor, J.E.1
  • 37
    • 0035724157 scopus 로고    scopus 로고
    • Genome-wide analysis of the general stress response in Bacillus subtilis
    • Price, C. W., Fawcett, P., Ceremonie, H., Su, N. et al., Genome-wide analysis of the general stress response in Bacillus subtilis. Mol. Microbiol. 2001, 41, 757-774.
    • (2001) Mol. Microbiol. , vol.41 , pp. 757-774
    • Price, C.W.1    Fawcett, P.2    Ceremonie, H.3    Su, N.4
  • 38
    • 0034810821 scopus 로고    scopus 로고
    • Global analysis of the general stress response of Bacillus subtilis
    • Petersohn, A., Brigulla, M., Haas, S., Hoheisel, J. D. et al., Global analysis of the general stress response of Bacillus subtilis. J. Bacteriol. 2001, 183, 5617-5631.
    • (2001) J. Bacteriol. , vol.183 , pp. 5617-5631
    • Petersohn, A.1    Brigulla, M.2    Haas, S.3    Hoheisel, J.D.4
  • 39
    • 84857710573 scopus 로고    scopus 로고
    • Defining the structure of the general stress regulon of Bacillus subtilis using targeted microarray analysis and Random Forest Classification
    • Nannapaneni, P., Hertwig, F., Depke, M., Hecker, M. et al., Defining the structure of the general stress regulon of Bacillus subtilis using targeted microarray analysis and Random Forest Classification. Microbiology 2012, 158, 696-707.
    • (2012) Microbiology , vol.158 , pp. 696-707
    • Nannapaneni, P.1    Hertwig, F.2    Depke, M.3    Hecker, M.4
  • 40
    • 0031679433 scopus 로고    scopus 로고
    • Non-specific, general and multiple stress resistance of growth-restricted Bacillus subtilis cells by the expression of the sigmaB regulon
    • Hecker, M., Völker, U., Non-specific, general and multiple stress resistance of growth-restricted Bacillus subtilis cells by the expression of the sigmaB regulon. Mol. Microbiol. 1998, 29, 1129-1136.
    • (1998) Mol. Microbiol. , vol.29 , pp. 1129-1136
    • Hecker, M.1    Völker, U.2
  • 41
    • 0032586856 scopus 로고    scopus 로고
    • Expression of the sigmaB-dependent general stress regulon confers multiple stress resistance in Bacillus subtilis
    • Völker, U., Maul, B., Hecker, M., Expression of the sigmaB-dependent general stress regulon confers multiple stress resistance in Bacillus subtilis. J. Bacteriol. 1999, 181, 3942-3948.
    • (1999) J. Bacteriol. , vol.181 , pp. 3942-3948
    • Völker, U.1    Maul, B.2    Hecker, M.3
  • 42
    • 0032574963 scopus 로고    scopus 로고
    • Bacillus licheniformis sigB operon encoding the general stress transcription factor sigma B
    • Brody, M. S., Price, C. W., Bacillus licheniformis sigB operon encoding the general stress transcription factor sigma B. Gene 1998, 212, 111-118.
    • (1998) Gene , vol.212 , pp. 111-118
    • Brody, M.S.1    Price, C.W.2
  • 43
    • 4143126679 scopus 로고    scopus 로고
    • A multicomponent protein complex mediates environmental stress signaling in Bacillus subtilis
    • Kim, T. J., Gaidenko, T. A., Price, C. W., A multicomponent protein complex mediates environmental stress signaling in Bacillus subtilis. J. Mol. Biol. 2004, 341, 135-150.
    • (2004) J. Mol. Biol. , vol.341 , pp. 135-150
    • Kim, T.J.1    Gaidenko, T.A.2    Price, C.W.3
  • 44
    • 0034915260 scopus 로고    scopus 로고
    • Identification of genes required for growth under ethanol stress using transposon mutagenesis in Saccharomyces cerevisiae
    • Takahashi, T., Shimoi, H., Ito, K., Identification of genes required for growth under ethanol stress using transposon mutagenesis in Saccharomyces cerevisiae. Mol. Genet. Genomics 2001, 265, 1112-1119.
    • (2001) Mol. Genet. Genomics , vol.265 , pp. 1112-1119
    • Takahashi, T.1    Shimoi, H.2    Ito, K.3
  • 45
    • 0042889117 scopus 로고    scopus 로고
    • A comparison of statistical methods for analysis of high density oligonucleotide array data
    • Rajagopalan, D., A comparison of statistical methods for analysis of high density oligonucleotide array data. Bioinformatics 2003, 19, 1469-1476.
    • (2003) Bioinformatics , vol.19 , pp. 1469-1476
    • Rajagopalan, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.