메뉴 건너뛰기




Volumn 115, Issue 2, 2013, Pages 613-620

A simple and novel method for GII norovirus genome clone with generic primers

Author keywords

Genome clone; Norovirus; Phylogenetic analysis; Rational design; Reverse transcriptase polymerase chain reaction

Indexed keywords

CLONE CELLS; GENES; POLYMERASE CHAIN REACTION;

EID: 84880577751     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/jam.12244     Document Type: Article
Times cited : (6)

References (27)
  • 1
    • 0142060853 scopus 로고    scopus 로고
    • The 3' end of Norwalk virus mRNA contains determinants that regulate the expression and stability of the viral capsid protein VP1: a novel function for the VP2 protein
    • Bertolotti-Ciarlet, A., Crawford, S.E., Hutson, A.M. and Estes, M.K. (2003) The 3' end of Norwalk virus mRNA contains determinants that regulate the expression and stability of the viral capsid protein VP1: a novel function for the VP2 protein. J Virol 77, 11603-11615.
    • (2003) J Virol , vol.77 , pp. 11603-11615
    • Bertolotti-Ciarlet, A.1    Crawford, S.E.2    Hutson, A.M.3    Estes, M.K.4
  • 2
    • 77950397317 scopus 로고    scopus 로고
    • Rapid evolution of pandemic noroviruses of the GII.4 lineage
    • Bull, R.A., Eden, J.S., Rawlinson, W.D. and White, P.A. (2010) Rapid evolution of pandemic noroviruses of the GII.4 lineage. PLoS Pathog 6, e1000831.
    • (2010) PLoS Pathog , vol.6
    • Bull, R.A.1    Eden, J.S.2    Rawlinson, W.D.3    White, P.A.4
  • 3
    • 77956287133 scopus 로고    scopus 로고
    • Complete genome characterization of Genogroup II norovirus strains from India: evidence of recombination in ORF2/3 overlap
    • Chhabra, P., Walimbe, A.M. and Chitambar, S.D. (2010) Complete genome characterization of Genogroup II norovirus strains from India: evidence of recombination in ORF2/3 overlap. Infect Genet Evol 10, 1101-1109.
    • (2010) Infect Genet Evol , vol.10 , pp. 1101-1109
    • Chhabra, P.1    Walimbe, A.M.2    Chitambar, S.D.3
  • 4
    • 0024212067 scopus 로고
    • Rapid production of full-length cDNAs from rare transcripts - amplification using a single gene-specific oligonucleotide primer
    • Frohman, M.A., Dush, M.K. and Martin, G.R. (1988) Rapid production of full-length cDNAs from rare transcripts - amplification using a single gene-specific oligonucleotide primer. Proc Natl Acad Sci USA 85, 8998-9002.
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 8998-9002
    • Frohman, M.A.1    Dush, M.K.2    Martin, G.R.3
  • 7
    • 0037388633 scopus 로고    scopus 로고
    • Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR
    • Kageyama, T., Kojima, S., Shinohara, M., Uchida, K., Fukushi, S., Hoshino, F.B., Takeda, N. and Katayama, K. (2003) Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR. J Clin Microbiol 41, 1548-1557.
    • (2003) J Clin Microbiol , vol.41 , pp. 1548-1557
    • Kageyama, T.1    Kojima, S.2    Shinohara, M.3    Uchida, K.4    Fukushi, S.5    Hoshino, F.B.6    Takeda, N.7    Katayama, K.8
  • 11
    • 79955749247 scopus 로고    scopus 로고
    • Human norovirus infection: surveillance and source tracking
    • Maunula, L. and von Bonsdorff, C.H. (2011) Human norovirus infection: surveillance and source tracking. Future Virol 6, 431-438.
    • (2011) Future Virol , vol.6 , pp. 431-438
    • Maunula, L.1    von Bonsdorff, C.H.2
  • 12
    • 55549147174 scopus 로고    scopus 로고
    • Identification of Monomorphic and Divergent Haplotypes in the 2006-2007 Norovirus GII/4 Epidemic Population by Genomewide Tracing of Evolutionary History
    • Motomura, K., Oka, T., Yokoyama, M., Nakamura, H., Mori, H., Ode, H., Hansman, G.S., Katayama, K. et al. (2008) Identification of Monomorphic and Divergent Haplotypes in the 2006-2007 Norovirus GII/4 Epidemic Population by Genomewide Tracing of Evolutionary History. J Virol 82, 11247-11262.
    • (2008) J Virol , vol.82 , pp. 11247-11262
    • Motomura, K.1    Oka, T.2    Yokoyama, M.3    Nakamura, H.4    Mori, H.5    Ode, H.6    Hansman, G.S.7    Katayama, K.8
  • 13
    • 66049092035 scopus 로고    scopus 로고
    • Molecular analysis of an oyster-related norovirus outbreak
    • Nenonen, N.P., Hannoun, C., Olsson, M.B. and Bergstrom, T. (2009) Molecular analysis of an oyster-related norovirus outbreak. J Clin Virol 45, 105-108.
    • (2009) J Clin Virol , vol.45 , pp. 105-108
    • Nenonen, N.P.1    Hannoun, C.2    Olsson, M.B.3    Bergstrom, T.4
  • 14
    • 79953858171 scopus 로고    scopus 로고
    • Full sequence analysis and characterization of the South Korean Norovirus GII-4 variant CUK-3
    • Park, J.W., Lee, S.G., Lee, Y.M., Jheong, W.H., Ryu, S. and Paik, S.Y. (2011) Full sequence analysis and characterization of the South Korean Norovirus GII-4 variant CUK-3. Virol J 8, 167.
    • (2011) Virol J , vol.8 , pp. 167
    • Park, J.W.1    Lee, S.G.2    Lee, Y.M.3    Jheong, W.H.4    Ryu, S.5    Paik, S.Y.6
  • 16
    • 84860320596 scopus 로고    scopus 로고
    • Genomic organization and recombination analysis of human norovirus identified from China
    • Shen, Q., Zhang, W., Yang, S.X., Chen, Y., Shan, T.L., Cui, L. and Hua, X.G. (2011) Genomic organization and recombination analysis of human norovirus identified from China. Mol Biol Rep 39, 1275-1281.
    • (2011) Mol Biol Rep , vol.39 , pp. 1275-1281
    • Shen, Q.1    Zhang, W.2    Yang, S.X.3    Chen, Y.4    Shan, T.L.5    Cui, L.6    Hua, X.G.7
  • 17
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. and Kumar, S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 20
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. and Higgins, D.G. (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 21
    • 0029763308 scopus 로고    scopus 로고
    • Molecular detection and epidemiology of small round-structured viruses in outbreaks of gastroenteritis in the Netherlands
    • Vinje, J. and Koopmans, P.G. (1996) Molecular detection and epidemiology of small round-structured viruses in outbreaks of gastroenteritis in the Netherlands. J Infect Dis 174, 610-615.
    • (1996) J Infect Dis , vol.174 , pp. 610-615
    • Vinje, J.1    Koopmans, P.G.2
  • 23
    • 77955282198 scopus 로고    scopus 로고
    • Complete genome sequence and phylogenetic analysis of a recombinant Korean norovirus, CBNU1, recovered from a 2006 outbreak
    • Yun, S.I., Kim, J.K., Song, B.H., Jeong, A.Y., Jee, Y.M., Lee, C.H., Paik, S.Y., Koo, Y. et al. (2010) Complete genome sequence and phylogenetic analysis of a recombinant Korean norovirus, CBNU1, recovered from a 2006 outbreak. Virus Res 152, 137-152.
    • (2010) Virus Res , vol.152 , pp. 137-152
    • Yun, S.I.1    Kim, J.K.2    Song, B.H.3    Jeong, A.Y.4    Jee, Y.M.5    Lee, C.H.6    Paik, S.Y.7    Koo, Y.8
  • 24
    • 80053075626 scopus 로고    scopus 로고
    • Prevalence and genetic diversity of norovirus in outpatient children with acute diarrhea in Shanghai, China
    • Zeng, M., Gong, Z.X., Zhang, Y.X., Zhu, Q.R. and Wang, X.H. (2011) Prevalence and genetic diversity of norovirus in outpatient children with acute diarrhea in Shanghai, China. Jpn J Infect Dis 64, 417-422.
    • (2011) Jpn J Infect Dis , vol.64 , pp. 417-422
    • Zeng, M.1    Gong, Z.X.2    Zhang, Y.X.3    Zhu, Q.R.4    Wang, X.H.5
  • 25
    • 81355147248 scopus 로고    scopus 로고
    • Clinical and molecular epidemiology of norovirus infection in childhood diarrhea in China
    • Zeng, M., Xu, X.H., Zhu, C.M., Chen, J., Zhu, Q.R., Lin, S.X., Jie, Y.Y., Shu, X.L. et al. (2012) Clinical and molecular epidemiology of norovirus infection in childhood diarrhea in China. J Med Virol 84, 145-151.
    • (2012) J Med Virol , vol.84 , pp. 145-151
    • Zeng, M.1    Xu, X.H.2    Zhu, C.M.3    Chen, J.4    Zhu, Q.R.5    Lin, S.X.6    Jie, Y.Y.7    Shu, X.L.8
  • 27
    • 73949096807 scopus 로고    scopus 로고
    • Molecular Epidemiology of Genogroup II-Genotype 4 Noroviruses in the United States between 1994 and 2006
    • Zheng, D.P., Widdowson, M.A., Glass, R.I. and Vinje, J. (2010) Molecular Epidemiology of Genogroup II-Genotype 4 Noroviruses in the United States between 1994 and 2006. J Clin Microbiol 48, 168-177.
    • (2010) J Clin Microbiol , vol.48 , pp. 168-177
    • Zheng, D.P.1    Widdowson, M.A.2    Glass, R.I.3    Vinje, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.