-
1
-
-
0012449566
-
Proliferative responses of blood mononuclear cells (BMNC) in a cohort of elderly humans: Role of lymphocyte phenotype and cytokine production
-
10691914 10.1046/j.1365-2249.2000.01146.x 1:CAS:528:DC%2BD3cXitlWmtrg%3D
-
Bruunsgaard H et al (2000) Proliferative responses of blood mononuclear cells (BMNC) in a cohort of elderly humans: role of lymphocyte phenotype and cytokine production. Clin Exp Immunol 119(3):433-440
-
(2000)
Clin Exp Immunol
, vol.119
, Issue.3
, pp. 433-440
-
-
Bruunsgaard, H.1
-
2
-
-
46249103973
-
Stem cell transcriptome profiling via massive-scale mRNA sequencing
-
18516046 10.1038/nmeth.1223 1:CAS:528:DC%2BD1cXnslyqs78%3D
-
Cloonan N et al (2008) Stem cell transcriptome profiling via massive-scale mRNA sequencing. Nat Methods 5(7):613-619
-
(2008)
Nat Methods
, vol.5
, Issue.7
, pp. 613-619
-
-
Cloonan, N.1
-
3
-
-
63549135460
-
Meta-analysis of age-related gene expression profiles identifies common signatures of aging
-
10.1093/bioinformatics/btp073
-
de Magalhães JP, Curado J, Church GM (2009) Meta-analysis of age-related gene expression profiles identifies common signatures of aging. Bioinformatics (Oxford, England) 25(7):875-881
-
(2009)
Bioinforma (Oxf, England)
, vol.25
, Issue.7
, pp. 875-881
-
-
De Magalhães, J.P.1
Curado, J.2
Church, G.M.3
-
4
-
-
77952553604
-
Next-generation sequencing in aging research: Emerging applications, problems, pitfalls and possible solutions
-
19900591 10.1016/j.arr.2009.10.006
-
de Magalhães JP, Finch CE, Janssens G (2010) Next-generation sequencing in aging research: emerging applications, problems, pitfalls and possible solutions. Ageing Res Rev 9(3):315-323
-
(2010)
Ageing Res Rev
, vol.9
, Issue.3
, pp. 315-323
-
-
De Magalhães, J.P.1
Finch, C.E.2
Janssens, G.3
-
5
-
-
77950554423
-
When does brain aging accelerate? Dangers of quadratic fits in cross-sectional studies
-
20109562 10.1016/j.neuroimage.2010.01.061
-
Fjell AM et al (2010) When does brain aging accelerate? Dangers of quadratic fits in cross-sectional studies. NeuroImage 50(4):1376-1383
-
(2010)
NeuroImage
, vol.50
, Issue.4
, pp. 1376-1383
-
-
Fjell, A.M.1
-
6
-
-
78651323093
-
Rfam: Wikipedia, clans and the "decimal" release
-
21062808 10.1093/nar/gkq1129 1:CAS:528:DC%2BC3sXivF2ltr4%3D
-
Gardner PP et al (2011) Rfam: wikipedia, clans and the "decimal" release. Nucleic Acids Res 39(Database issue):D141-D145
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.DATABASE ISSUE
-
-
Gardner, P.P.1
-
7
-
-
77950363010
-
Mechanisms underlying inflammation in neurodegeneration
-
20303880 10.1016/j.cell.2010.02.016 1:CAS:528:DC%2BC3cXlsVSgu7Y%3D
-
Glass CK et al (2010) Mechanisms underlying inflammation in neurodegeneration. Cell 140(6):918-934
-
(2010)
Cell
, vol.140
, Issue.6
, pp. 918-934
-
-
Glass, C.K.1
-
8
-
-
77649184973
-
Microglia: Biology and pathology
-
20012873 10.1007/s00401-009-0622-0
-
Graeber MB, Streit WJ (2010) Microglia: biology and pathology. Acta Neuropathol 119(1):89-105
-
(2010)
Acta Neuropathol
, vol.119
, Issue.1
, pp. 89-105
-
-
Graeber, M.B.1
Streit, W.J.2
-
9
-
-
0043123153
-
Vienna RNA secondary structure server
-
12824340 10.1093/nar/gkg599 1:CAS:528:DC%2BD3sXltVWisrs%3D
-
Hofacker IL (2003) Vienna RNA secondary structure server. Nucleic Acids Res 31(13):3429-3431
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3429-3431
-
-
Hofacker, I.L.1
-
10
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
10.1038/nprot.2008.211 1:CAS:528:DC%2BD1cXhsFCkurnI
-
Huang DW, Sherman BT, Lempicki RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4(1):44-57
-
(2009)
Nat Protoc
, vol.4
, Issue.1
, pp. 44-57
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
11
-
-
0032703482
-
Functional genomics and rat models
-
10568741 10.1101/gr.9.11.1013 1:CAS:528:DyaK1MXns12ktr4%3D
-
Jacob HJ (1999) Functional genomics and rat models. Genome Res 9(11):1013-1016
-
(1999)
Genome Res
, vol.9
, Issue.11
, pp. 1013-1016
-
-
Jacob, H.J.1
-
12
-
-
80053027909
-
Functional consequences of developmentally regulated alternative splicing
-
21921927 10.1038/nrg3052 1:CAS:528:DC%2BC3MXhtFylsrbO
-
Kalsotra A, Cooper TA (2011) Functional consequences of developmentally regulated alternative splicing. Nat Rev Genet 12(10):715-729
-
(2011)
Nat Rev Genet
, vol.12
, Issue.10
, pp. 715-729
-
-
Kalsotra, A.1
Cooper, T.A.2
-
13
-
-
38949145803
-
A systematic look at an old problem
-
18256658 10.1038/451644a 1:CAS:528:DC%2BD1cXhs1Kntrk%3D
-
Kirkwood TBL (2008) A systematic look at an old problem. Nature 451(7179):644-647
-
(2008)
Nature
, vol.451
, Issue.7179
, pp. 644-647
-
-
Kirkwood, T.B.L.1
-
14
-
-
30844442607
-
The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C
-
10.1126/science.1118265 1:CAS:528:DC%2BD28XkvVanuw%3D%3D
-
Kishore S, Stamm S (2006) The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C. Science (New York, NY) 311(5758):230-232
-
(2006)
Science (New York, N.Y.)
, vol.311
, Issue.5758
, pp. 230-232
-
-
Kishore, S.1
Stamm, S.2
-
15
-
-
78651293534
-
Mirbase: Integrating microRNA annotation and deep-sequencing data
-
21037258 10.1093/nar/gkq1027 1:CAS:528:DC%2BC3sXivF2murs%3D
-
Kozomara A, Griffiths-Jones S (2011) Mirbase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res 39(Database issue):D152-D157
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.DATABASE ISSUE
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
16
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
19261174 10.1186/gb-2009-10-3-r25
-
Langmead B et al (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10(3):R25
-
(2009)
Genome Biol
, vol.10
, Issue.3
, pp. 25
-
-
Langmead, B.1
-
17
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
10.1093/bioinformatics/btp352
-
Li H et al (2009) The Sequence Alignment/Map format and SAMtools. Bioinforma (Oxf, England) 25(16):2078-2079
-
(2009)
Bioinforma (Oxf, England)
, vol.25
, Issue.16
, pp. 2078-2079
-
-
Li, H.1
-
18
-
-
69949084211
-
Protein aggregation as a paradigm of aging
-
19527771 10.1016/j.bbagen.2009.06.005 1:CAS:528:DC%2BD1MXhtFamsrjK
-
Lindner AB, Demarez A (2009) Protein aggregation as a paradigm of aging. Biochim Biophys Acta 1790(10):980-996
-
(2009)
Biochim Biophys Acta
, vol.1790
, Issue.10
, pp. 980-996
-
-
Lindner, A.B.1
Demarez, A.2
-
19
-
-
0029826636
-
Antigen-independent changes in naive CD4 T cells with aging
-
8920876 10.1084/jem.184.5.1891 1:CAS:528:DyaK28XmvFaisb8%3D
-
Linton P, Haynes L, Klinman N (1996) Antigen-independent changes in naive CD4 T cells with aging. J Exp Med 184(November):1891-1900
-
(1996)
J Exp Med
, vol.184
, Issue.NOVEMBER
, pp. 1891-1900
-
-
Linton, P.1
Haynes, L.2
Klinman, N.3
-
20
-
-
3042631024
-
Gene regulation and DNA damage in the ageing human brain
-
Lu T et al (2004) Gene regulation and DNA damage in the ageing human brain. Nature 429(6994):883-91
-
(2004)
Nature
, vol.429
, Issue.6994
, pp. 883-891
-
-
Lu, T.1
-
21
-
-
78651285748
-
CDD: A conserved domain database for the functional annotation of proteins
-
21109532 10.1093/nar/gkq1189 1:CAS:528:DC%2BC3sXivF2ltb8%3D
-
Marchler-Bauer A et al (2011) CDD: a conserved domain database for the functional annotation of proteins. Nucleic Acids Res 39(Database issue):D225-D229
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.DATABASE ISSUE
-
-
Marchler-Bauer, A.1
-
22
-
-
52949096084
-
Next-generation DNA sequencing methods
-
18576944 10.1146/annurev.genom.9.081307.164359 1:CAS:528: DC%2BD1cXht1SnsbbJ
-
Mardis ER (2008) Next-generation DNA sequencing methods. Annu Rev Genomics Hum Genet 9:387-402
-
(2008)
Annu Rev Genomics Hum Genet
, vol.9
, pp. 387-402
-
-
Mardis, E.R.1
-
23
-
-
50649089207
-
RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
-
18550803 10.1101/gr.079558.108 1:CAS:528:DC%2BD1cXhtV2qsr3E
-
Marioni JC et al (2008) RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. Genome Res 18(9):1509-1517
-
(2008)
Genome Res
, vol.18
, Issue.9
, pp. 1509-1517
-
-
Marioni, J.C.1
-
24
-
-
0031944188
-
Serotonin in aging, late-life depression, and Alzheimer's disease: The emerging role of functional imaging
-
9571651 10.1016/S0893-133X(97)00194-2 1:CAS:528:DyaK1cXivVaiurg%3D
-
Meltzer CC et al (1998) Serotonin in aging, late-life depression, and Alzheimer's disease: the emerging role of functional imaging. Neuropsychopharmacology 18(6):407-430
-
(1998)
Neuropsychopharmacology
, vol.18
, Issue.6
, pp. 407-430
-
-
Meltzer, C.C.1
-
25
-
-
43649103795
-
Dietary lipoic acid supplementation can mimic or block the effect of dietary restriction on life span
-
18486188 10.1016/j.mad.2008.04.004 1:CAS:528:DC%2BD1cXmtVSgtLg%3D
-
Merry BJ, Kirk AJ, Goyns MH (2008) Dietary lipoic acid supplementation can mimic or block the effect of dietary restriction on life span. Mech Ageing Dev 129(6):341-348
-
(2008)
Mech Ageing Dev
, vol.129
, Issue.6
, pp. 341-348
-
-
Merry, B.J.1
Kirk, A.J.2
Goyns, M.H.3
-
26
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
10.1038/nmeth.1226
-
Mortazavi A et al (2008) Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods 5(7):1-8
-
(2008)
Nat Methods
, vol.5
, Issue.7
, pp. 1-8
-
-
Mortazavi, A.1
-
27
-
-
79953113775
-
Circulating heat shock protein 70 in health, aging and disease
-
21443787 10.1186/1471-2172-12-24 1:CAS:528:DC%2BC3MXkslygt7k%3D
-
Njemini R et al (2011) Circulating heat shock protein 70 in health, aging and disease. BMC Immunol 12(1):24
-
(2011)
BMC Immunol
, vol.12
, Issue.1
, pp. 24
-
-
Njemini, R.1
-
28
-
-
34548415546
-
Age-related change of endocytic receptors megalin and cubilin in the kidney in rats
-
17453355 10.1007/s10522-007-9093-7 1:CAS:528:DC%2BD2sXpvVWqsbg%3D
-
Odera K, Goto S, Takahashi R (2007) Age-related change of endocytic receptors megalin and cubilin in the kidney in rats. Biogerontology 8(5):505-515
-
(2007)
Biogerontology
, vol.8
, Issue.5
, pp. 505-515
-
-
Odera, K.1
Goto, S.2
Takahashi, R.3
-
29
-
-
78650539308
-
From RNA-seq reads to differential expression results
-
21176179 10.1186/gb-2010-11-12-220 1:CAS:528:DC%2BC3MXkt12quw%3D%3D
-
Oshlack A, Robinson MD, Young MD (2010) From RNA-seq reads to differential expression results. Genome Biol 11(12):220
-
(2010)
Genome Biol
, vol.11
, Issue.12
, pp. 220
-
-
Oshlack, A.1
Robinson, M.D.2
Young, M.D.3
-
30
-
-
70149123708
-
Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain
-
19696892 10.1371/journal.pgen.1000617
-
Ponjavic J et al (2009) Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain. PLoS Genet 5(8):e1000617
-
(2009)
PLoS Genet
, vol.5
, Issue.8
, pp. 1000617
-
-
Ponjavic, J.1
-
31
-
-
79958770713
-
Non-coding RNA networks underlying cognitive disorders across the lifespan
-
Qureshi IA & Mehler MF (2011) Non-coding RNA networks underlying cognitive disorders across the lifespan. Trends in Molecular Medicine, 17(6):337-46
-
(2011)
Trends in Molecular Medicine
, vol.17
, Issue.6
, pp. 337-346
-
-
Qureshi, I.A.1
Mehler, M.F.2
-
32
-
-
77953176036
-
A scaling normalization method for differential expression analysis of RNA-seq data
-
20196867 10.1186/gb-2010-11-3-r25
-
Robinson MD, Oshlack A (2010) A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol 11(3):R25
-
(2010)
Genome Biol
, vol.11
, Issue.3
, pp. 25
-
-
Robinson, M.D.1
Oshlack, A.2
-
33
-
-
84856056846
-
Mitochondrial transport in neurons: Impact on synaptic homeostasis and neurodegeneration
-
Sheng Z-H & Cai Q (2012) Mitochondrial transport in neurons: impact on synaptic homeostasis and neurodegeneration. Nature Reviews Neuroscience, 13(2):77-93
-
(2012)
Nature Reviews Neuroscience
, vol.13
, Issue.2
, pp. 77-93
-
-
Sheng, Z.-H.1
Cai, Q.2
-
34
-
-
77956275374
-
MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain
-
20647238 10.1101/gr.106849.110 1:CAS:528:DC%2BC3cXhtFeru7vN
-
Somel M, Guo S, Fu N et al (2010) MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain. Genome Res 20:1207-1218
-
(2010)
Genome Res
, vol.20
, pp. 1207-1218
-
-
Somel, M.1
Guo, S.2
Fu, N.3
Yan, Z.4
Hu, H.Y.5
Xu, Y.6
Yuan, Y.7
-
35
-
-
57149085481
-
Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms
-
18927111 10.1093/nar/gkn705
-
't Hoen PAC et al (2008) Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms. Nucleic Acids Res 36(21):e141
-
(2008)
Nucleic Acids Res
, vol.36
, Issue.21
, pp. 141
-
-
Hoen, P.A.C.1
-
36
-
-
33644547003
-
Mapping brain maturation
-
16472876 10.1016/j.tins.2006.01.007 1:CAS:528:DC%2BD28XitVGqurc%3D
-
Toga AW, Thompson PM, Sowell ER (2006) Mapping brain maturation. Trends Neurosci 29(3):148-159
-
(2006)
Trends Neurosci
, vol.29
, Issue.3
, pp. 148-159
-
-
Toga, A.W.1
Thompson, P.M.2
Sowell, E.R.3
-
37
-
-
80053529549
-
Analysis of alternative splicing associated with aging and neurodegeneration in the human brain
-
Tollervey JR et al (2011) Analysis of alternative splicing associated with aging and neurodegeneration in the human brain. Genome Research, 21(10):1572-1582
-
(2011)
Genome Research
, vol.21
, Issue.10
, pp. 1572-1582
-
-
Tollervey, J.R.1
-
38
-
-
65449136284
-
TopHat: Discovering splice junctions with RNA-Seq
-
10.1093/bioinformatics/btp120 1:CAS:528:DC%2BD1MXltFWisrk%3D
-
Trapnell C, Pachter L, Salzberg SL (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics (Oxford, England) 25(9):1105-1111
-
(2009)
BioinformA (Oxf, England)
, vol.25
, Issue.9
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
39
-
-
77952123055
-
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-
10.1038/nbt.1621
-
Trapnell C et al (2010) Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol 28(5):516-520
-
(2010)
Nat Biotechnol
, vol.28
, Issue.5
, pp. 516-520
-
-
Trapnell, C.1
-
40
-
-
2542637241
-
Altered hippocampal transcript profile accompanies an age-related spatial memory deficit in mice
-
15169854 10.1101/lm.68204
-
Verbitsky M et al (2004) Altered hippocampal transcript profile accompanies an age-related spatial memory deficit in mice. Learn Mem 11(3):253-260
-
(2004)
Learn Mem
, vol.11
, Issue.3
, pp. 253-260
-
-
Verbitsky, M.1
-
41
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
18978772 10.1038/nature07509 1:CAS:528:DC%2BD1cXhsVegtbfL
-
Wang ET et al (2008) Alternative isoform regulation in human tissue transcriptomes. Nature 456(7221):470-476
-
(2008)
Nature
, vol.456
, Issue.7221
, pp. 470-476
-
-
Wang, E.T.1
-
42
-
-
57749195712
-
RNA-Seq: A revolutionary tool for transcriptomics
-
19015660 10.1038/nrg2484 1:CAS:528:DC%2BD1cXhsFWis7bL
-
Wang Z, Gerstein M, Snyder M (2009) RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet 10(1):57-63
-
(2009)
Nat Rev Genet
, vol.10
, Issue.1
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
43
-
-
33750995177
-
Aging of the cerebral cortex
-
Wong T (2002) Aging of the cerebral cortex. McGill J Med 6(14):104-113
-
(2002)
McGill J Med
, vol.14
, pp. 104-113
-
-
Wong, T.1
-
44
-
-
37249049422
-
AGEMAP: A gene expression database for aging in mice
-
18081424 10.1371/journal.pgen.0030201
-
Zahn JM et al (2007) AGEMAP: a gene expression database for aging in mice. PLoS Genet 3(11):e201
-
(2007)
PLoS Genet
, vol.3
, Issue.11
, pp. 201
-
-
Zahn, J.M.1
|