-
1
-
-
79953177017
-
Persistent infection or successive reinfection of deer mice with Bartonella vinsonii subsp. arupensis
-
Bai, Y., Calisher, C. H., Kosoy, M. Y., Root, J. J. and Doty, J. B. (2011) Persistent infection or successive reinfection of deer mice with Bartonella vinsonii subsp. arupensis. Appl. Environ. Microbiol., 77, 1728-1731.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 1728-1731
-
-
Bai, Y.1
Calisher, C.H.2
Kosoy, M.Y.3
Root, J.J.4
Doty, J.B.5
-
2
-
-
0000353178
-
A maximisation technique occurring in the statistical analysis of probabilistic functions of Markov chains
-
Baum, I. E., Petrie, Y., Soules, G. and Weiss, N. (1970) A maximisation technique occurring in the statistical analysis of probabilistic functions of Markov chains. Ann. Math. Statist., 41, 164-171.
-
(1970)
Ann. Math. Statist.
, vol.41
, pp. 164-171
-
-
Baum, I.E.1
Petrie, Y.2
Soules, G.3
Weiss, N.4
-
3
-
-
63149178645
-
Effects of abundance on infection in natural populations: field voles and cowpox virus
-
Begon, M., Telfer, S., Burthe, S. J., Lambin, X., Smith, J. M. and Paterson, S. (2009) Effects of abundance on infection in natural populations: field voles and cowpox virus. Epidemics, 1, 35-46.
-
(2009)
Epidemics
, vol.1
, pp. 35-46
-
-
Begon, M.1
Telfer, S.2
Burthe, S.J.3
Lambin, X.4
Smith, J.M.5
Paterson, S.6
-
4
-
-
0031045889
-
Cowpox in British voles and mice
-
Bennett, M., Crouch, A. J., Begon, M., Duffy, B., Feore, S., Gaskell, R. M., Kelly, D. F., McCracken, C. M., Vicary, L. and Baxby, D. (1997) Cowpox in British voles and mice. J. Compar. Path., 116, 35-44.
-
(1997)
J. Compar. Path.
, vol.116
, pp. 35-44
-
-
Bennett, M.1
Crouch, A.J.2
Begon, M.3
Duffy, B.4
Feore, S.5
Gaskell, R.M.6
Kelly, D.F.7
McCracken, C.M.8
Vicary, L.9
Baxby, D.10
-
5
-
-
0034997025
-
Longitudinal monitoring of the dynamics of infections due to Bartonella species in UK woodland rodents
-
Birtles, R. J., Hazel, S. M., Bennett, M., Bown, K., Raoult, D. and Begon, M. (2001) Longitudinal monitoring of the dynamics of infections due to Bartonella species in UK woodland rodents. Epidem. Infectn, 126, 323-329.
-
(2001)
Epidem. Infectn
, vol.126
, pp. 323-329
-
-
Birtles, R.J.1
Hazel, S.M.2
Bennett, M.3
Bown, K.4
Raoult, D.5
Begon, M.6
-
6
-
-
1842536090
-
Flea-borne Bartonella grahamii and Bartonella taylorii in Bank Voles
-
Bown, K. J., Bennett, M. and Begon, M. (2004) Flea-borne Bartonella grahamii and Bartonella taylorii in Bank Voles. Emergng Infect. Dis., 10, 684-687.
-
(2004)
Emergng Infect. Dis.
, vol.10
, pp. 684-687
-
-
Bown, K.J.1
Bennett, M.2
Begon, M.3
-
7
-
-
57149090721
-
Relative importance of Ixodes ricinus and Ixodes trianguliceps as vectors for Anaplasma phagocytophilum and Babesia microti in field vole (Microtus agrestis) populations
-
Bown, K. J., Lambin, X., Telford, G. R., Ogden, N. H., Telfer, S., Woldehiwet, Z. and Birtles, R. J. (2008) Relative importance of Ixodes ricinus and Ixodes trianguliceps as vectors for Anaplasma phagocytophilum and Babesia microti in field vole (Microtus agrestis) populations. Appl. Environ. Microbiol., 74, 7118-7125.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 7118-7125
-
-
Bown, K.J.1
Lambin, X.2
Telford, G.R.3
Ogden, N.H.4
Telfer, S.5
Woldehiwet, Z.6
Birtles, R.J.7
-
8
-
-
84880303984
-
-
Coupled hidden Markov Models for modelling interacting processes. Technical Report 405. Massachusetts Institute of Technology Media Laboratory, Cambridge.
-
Brand, M. (1997) Coupled hidden Markov Models for modelling interacting processes. Technical Report 405. Massachusetts Institute of Technology Media Laboratory, Cambridge.
-
(1997)
-
-
Brand, M.1
-
9
-
-
77949275219
-
Individual growth rates in natural field voles, Microtus agrestis, populations exhibiting cyclic population dynamics
-
Burthe, S. J., Lambin, X., Telfer, S., Douglas, A., Beldomenico, P., Smith, A. and Begon, M. (2009) Individual growth rates in natural field voles, Microtus agrestis, populations exhibiting cyclic population dynamics. Oecologia, 162, 653-661.
-
(2009)
Oecologia
, vol.162
, pp. 653-661
-
-
Burthe, S.J.1
Lambin, X.2
Telfer, S.3
Douglas, A.4
Beldomenico, P.5
Smith, A.6
Begon, M.7
-
10
-
-
77958524315
-
An application of hidden Markov models to the French variant Creutzfeldt-Jakob disease epidemic
-
Chadeau-Hyam, M., Clarke, P. S., Guihenneuc-Jouyaux, C., Cousens, S. N., Will, R. G. and Ghani, A. C. (2010) An application of hidden Markov models to the French variant Creutzfeldt-Jakob disease epidemic. Appl. Statist., 59, 839-853.
-
(2010)
Appl. Statist.
, vol.59
, pp. 839-853
-
-
Chadeau-Hyam, M.1
Clarke, P.S.2
Guihenneuc-Jouyaux, C.3
Cousens, S.N.4
Will, R.G.5
Ghani, A.C.6
-
11
-
-
0032780371
-
Cowpox: reservoir hosts and geographic range
-
Chantrey, J., Meyer, H., Baxby, D., Begon, M., Bown, K. J., Hazel, S. M., Jones, T., Montgomery, W. I. and Bennett, M. (1999) Cowpox: reservoir hosts and geographic range. Epidem. Infectn, 122, 455-460.
-
(1999)
Epidem. Infectn
, vol.122
, pp. 455-460
-
-
Chantrey, J.1
Meyer, H.2
Baxby, D.3
Begon, M.4
Bown, K.J.5
Hazel, S.M.6
Jones, T.7
Montgomery, W.I.8
Bennett, M.9
-
12
-
-
0003107701
-
Calculating posterior distributions and modal estimates in Markov mixture models
-
Chib, S. (1996) Calculating posterior distributions and modal estimates in Markov mixture models. J. Econmetr., 75, 79-97.
-
(1996)
J. Econmetr.
, vol.75
, pp. 79-97
-
-
Chib, S.1
-
14
-
-
3142658734
-
Multiplex real-time PCR for detection of Anaplasma phagocytophilum and Borrelia burgdorferi
-
Courtney, J. W. L., Kostelnik, M., Zeidner, N. S. and Massung, R. F. (2004) Multiplex real-time PCR for detection of Anaplasma phagocytophilum and Borrelia burgdorferi. J. Clin. Microbiol., 42, 3164-3168.
-
(2004)
J. Clin. Microbiol.
, vol.42
, pp. 3164-3168
-
-
Courtney, J.W.L.1
Kostelnik, M.2
Zeidner, N.S.3
Massung, R.F.4
-
16
-
-
33750325305
-
An exact Gibbs sampler for the Markov-modulated Poisson process
-
Fearnhead, P. and Sherlock, C. (2006) An exact Gibbs sampler for the Markov-modulated Poisson process. J. R. Statist. Soc. B, 68, 767-784.
-
(2006)
J. R. Statist. Soc. B
, vol.68
, pp. 767-784
-
-
Fearnhead, P.1
Sherlock, C.2
-
17
-
-
0001582213
-
Inference and monitoring convergence
-
(eds W. R. Gilks, S. Richardson and D. J. Spiegelhalter). London: Chapman and Hall.
-
Gelman, A. (1996) Inference and monitoring convergence. In Markov Chain Monte Carlo in Practice (eds W. R. Gilks, S. Richardson and D. J. Spiegelhalter). London: Chapman and Hall.
-
(1996)
Markov Chain Monte Carlo in Practice
-
-
Gelman, A.1
-
18
-
-
84972492387
-
Inference from iterative simulation using multiple sequences
-
Gelman, A. and Rubin, D. (1992) Inference from iterative simulation using multiple sequences. Statist. Sci., 7, 457-472.
-
(1992)
Statist. Sci.
, vol.7
, pp. 457-472
-
-
Gelman, A.1
Rubin, D.2
-
20
-
-
77956889087
-
Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
-
Green, P. J. (1995) Reversible jump Markov chain Monte Carlo computation and Bayesian model determination. Biometrika, 82, 711-732.
-
(1995)
Biometrika
, vol.82
, pp. 711-732
-
-
Green, P.J.1
-
21
-
-
0141907306
-
Estimating hidden semi-Markov chains from discrete sequences
-
Guédon, Y. (2003) Estimating hidden semi-Markov chains from discrete sequences. J. Computnl Graph Statist., 12, 604-639.
-
(2003)
J. Computnl Graph Statist.
, vol.12
, pp. 604-639
-
-
Guédon, Y.1
-
22
-
-
0033864135
-
Modelling markers of disease progression by a hidden Markov process: application to characterising CD4 cell decline
-
Guihenneuc-Jouyaux, C., Richardson, S. and Longini, I. M. (2000) Modelling markers of disease progression by a hidden Markov process: application to characterising CD4 cell decline. Biometrics, 56, 733-741.
-
(2000)
Biometrics
, vol.56
, pp. 733-741
-
-
Guihenneuc-Jouyaux, C.1
Richardson, S.2
Longini, I.M.3
-
23
-
-
12344336572
-
Prospective studies of Bartonella of rodents: part I, Demographic and temporal patterns in population dynamics
-
Kosoy, M., Mandel, E., Green, D., Marston, E. and Childs, J. (2004) Prospective studies of Bartonella of rodents: part I, Demographic and temporal patterns in population dynamics. Vect. Borne Zoonotic Dis., 4, 285-295.
-
(2004)
Vect. Borne Zoonotic Dis.
, vol.4
, pp. 285-295
-
-
Kosoy, M.1
Mandel, E.2
Green, D.3
Marston, E.4
Childs, J.5
-
24
-
-
80053636950
-
Infection dynamics of endemic malaria in a wild bird population: parasite species-dependent drivers of spatial and temporal variation in transmission rates
-
Lachish, S., Knowles, S. C. L., Alves, R., Wood, M. J. and Sheldon, B. C. (2011) Infection dynamics of endemic malaria in a wild bird population: parasite species-dependent drivers of spatial and temporal variation in transmission rates. J. Anim. Ecol., 80, 1207-1216.
-
(2011)
J. Anim. Ecol.
, vol.80
, pp. 1207-1216
-
-
Lachish, S.1
Knowles, S.C.L.2
Alves, R.3
Wood, M.J.4
Sheldon, B.C.5
-
25
-
-
84880263610
-
-
Coupled hidden semi Markov models for activity recognition. Institute of Electrical and Electronics Engineers Wrkshp Motion and Video Computing.
-
Natarajan, P. and Nevatia, R. (2007) Coupled hidden semi Markov models for activity recognition. Institute of Electrical and Electronics Engineers Wrkshp Motion and Video Computing.
-
(2007)
-
-
Natarajan, P.1
Nevatia, R.2
-
26
-
-
20744432315
-
Multievent: an extension of multistate capture-recapture models to uncertain states
-
Pradel, R. (2005) Multievent: an extension of multistate capture-recapture models to uncertain states. Biometrics, 61, 442-447.
-
(2005)
Biometrics
, vol.61
, pp. 442-447
-
-
Pradel, R.1
-
27
-
-
0024610919
-
A tutorial on hidden Markov models and selected applications in speech recognition
-
Rabiner, L. R. (1989) A tutorial on hidden Markov models and selected applications in speech recognition. Proc. IEEE, 77, 257-286.
-
(1989)
Proc. IEEE
, vol.77
, pp. 257-286
-
-
Rabiner, L.R.1
-
28
-
-
84863304598
-
-
R Development Core Team Vienna: R Foundation for Statistical Computing.
-
R Development Core Team (2012) R: a Language and Environment for Statistical Computing. Vienna: R Foundation for Statistical Computing.
-
(2012)
R: a Language and Environment for Statistical Computing
-
-
-
29
-
-
0034313933
-
Learning interaction dynamics with couple hidden Markov models
-
Rezek, I., Sykacek, P. and Roberts, S. J. (2000) Learning interaction dynamics with couple hidden Markov models. IEE Proc. Sci. Measmnt Technol., 147, 345-350.
-
(2000)
IEE Proc. Sci. Measmnt Technol.
, vol.147
, pp. 345-350
-
-
Rezek, I.1
Sykacek, P.2
Roberts, S.J.3
-
30
-
-
43949174023
-
Bayesian estimation of hidden Markov chains: a stochastic implementation
-
Robert, C. P., Celeux, G. and Diebolt, J. (1993) Bayesian estimation of hidden Markov chains: a stochastic implementation. Statist. Probab. Lett., 16, 77-83.
-
(1993)
Statist. Probab. Lett.
, vol.16
, pp. 77-83
-
-
Robert, C.P.1
Celeux, G.2
Diebolt, J.3
-
31
-
-
0033236612
-
Convergence controls for MCMC algorithms, with application to hidden Markov chains
-
Robert, C. P., Rydén, G. and Titterington, D. M. (1999) Convergence controls for MCMC algorithms, with application to hidden Markov chains. J. Statist. Computn Simuln, 64, 327-355.
-
(1999)
J. Statist. Computn Simuln
, vol.64
, pp. 327-355
-
-
Robert, C.P.1
Rydén, G.2
Titterington, D.M.3
-
32
-
-
0041724127
-
Reparameterization strategies for hidden Markov models and Bayesian approaches to maximum likelihood estimation
-
Robert, C. P. and Titterington, D. M. (1998) Reparameterization strategies for hidden Markov models and Bayesian approaches to maximum likelihood estimation. Statist. Comput., 8, 145-158.
-
(1998)
Statist. Comput.
, vol.8
, pp. 145-158
-
-
Robert, C.P.1
Titterington, D.M.2
-
33
-
-
0013037129
-
Optimal scaling for various Metropolis-Hastings algorithms
-
Roberts, G. O. and Rosenthal, J. (2001) Optimal scaling for various Metropolis-Hastings algorithms. Statist. Sci., 16, 351-367.
-
(2001)
Statist. Sci.
, vol.16
, pp. 351-367
-
-
Roberts, G.O.1
Rosenthal, J.2
-
34
-
-
0032596518
-
Mixed memory Markov models: decomposing complex stochastic processes as mixtures of simpler ones
-
Saul, K. and Jordan, M. (1999) Mixed memory Markov models: decomposing complex stochastic processes as mixtures of simpler ones. Mach. Learn., 37, 75-87.
-
(1999)
Mach. Learn.
, vol.37
, pp. 75-87
-
-
Saul, K.1
Jordan, M.2
-
35
-
-
0036489069
-
Bayesian methods for hidden Markov models: recursive computing in the 21th century
-
Scott, S. L. (2002) Bayesian methods for hidden Markov models: recursive computing in the 21th century. J. Am. Statist. Ass., 97, 337-351.
-
(2002)
J. Am. Statist. Ass.
, vol.97
, pp. 337-351
-
-
Scott, S.L.1
-
36
-
-
78650237279
-
The random walk Metropolis: linking theory and practice through a case study
-
Sherlock, C., Fearnhead, P. and Roberts, G. O. (2010) The random walk Metropolis: linking theory and practice through a case study. Statist. Sci., 28, 172-190.
-
(2010)
Statist. Sci.
, vol.28
, pp. 172-190
-
-
Sherlock, C.1
Fearnhead, P.2
Roberts, G.O.3
-
37
-
-
72249090639
-
Optimal scaling of the random walk Metropolis on elliptically symmetric unimodal targets
-
Sherlock, C. and Roberts, G. (2009) Optimal scaling of the random walk Metropolis on elliptically symmetric unimodal targets. Bernoulli, 15, 774-798.
-
(2009)
Bernoulli
, vol.15
, pp. 774-798
-
-
Sherlock, C.1
Roberts, G.2
-
38
-
-
33846815195
-
Contrasting dynamics of Bartonella spp. in cyclic field vole populations: the impact of vector and host dynamics
-
Telfer, S., Begon, M., Bennett, M., Bown, K., Burthe, S., Lambin, X., Telford, G. and Birtles, R. (2007) Contrasting dynamics of Bartonella spp. in cyclic field vole populations: the impact of vector and host dynamics. Parasitology, 134, 413-425.
-
(2007)
Parasitology
, vol.134
, pp. 413-425
-
-
Telfer, S.1
Begon, M.2
Bennett, M.3
Bown, K.4
Burthe, S.5
Lambin, X.6
Telford, G.7
Birtles, R.8
-
39
-
-
46249099050
-
Parasite interactions in natural populations: insights from longitudinal data
-
Telfer, S., Birtles, R., Bennett, M., Lambin, X., Paterson, S. and Begon, M. (2008) Parasite interactions in natural populations: insights from longitudinal data. Parasitology, 135, 767-781.
-
(2008)
Parasitology
, vol.135
, pp. 767-781
-
-
Telfer, S.1
Birtles, R.2
Bennett, M.3
Lambin, X.4
Paterson, S.5
Begon, M.6
-
40
-
-
77957737494
-
Species interactions in a parasite community drive infection risk in a wildlife population
-
Telfer, S., Lambin, X., Birtles, R., Beldomenico, P., Burthe, S. J., Paterson, S. and Begon, M. (2010) Species interactions in a parasite community drive infection risk in a wildlife population. Science, 330, 243-246.
-
(2010)
Science
, vol.330
, pp. 243-246
-
-
Telfer, S.1
Lambin, X.2
Birtles, R.3
Beldomenico, P.4
Burthe, S.J.5
Paterson, S.6
Begon, M.7
-
41
-
-
84880268363
-
-
A hidden Markov model for disease interactions in field voles. Technical Report. Depart ment of Mathematics and Statistics, Lancaster University, Lancaster. (Available from)
-
Xifara, T. D. (2012) A hidden Markov model for disease interactions in field voles. Technical Report. Depart ment of Mathematics and Statistics, Lancaster University, Lancaster. (Available from http://www.math.lancs.ac.uk/~xifara.)
-
(2012)
-
-
Xifara, T.D.1
-
42
-
-
0036079795
-
HMMs and coupled HMMs for multi-channel EEG classification
-
New York: Institute of Electrical and Electronics Engineers.
-
Zhong, S. and Ghosh, J. (2002) HMMs and coupled HMMs for multi-channel EEG classification. In Proc. Int. Jt Conf. Neural Networks, pp. 1154-1159. New York: Institute of Electrical and Electronics Engineers.
-
(2002)
Proc. Int. Jt Conf. Neural Networks
, pp. 1154-1159
-
-
Zhong, S.1
Ghosh, J.2
|