메뉴 건너뛰기




Volumn 2013, Issue , 2013, Pages

Natural antisense transcripts in plants: A review and identification in soybean infected with phakopsora pachyrhizi supersage library

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY RNA; MESSENGER RNA; NATURAL ANTISENSE TRANSCRIPT; UNCLASSIFIED DRUG; TRANSCRIPTOME;

EID: 84880157749     PISSN: None     EISSN: 1537744X     Source Type: Journal    
DOI: 10.1155/2013/219798     Document Type: Review
Times cited : (12)

References (75)
  • 1
    • 77951687828 scopus 로고    scopus 로고
    • 'Omics' analyses of regulatory networks in plant abiotic stress responses
    • 2-s2.0-77951687828 10.1016/j.pbi.2009.12.006
    • Urano K., Kurihara Y., Seki M., Shinozaki K., 'Omics' analyses of regulatory networks in plant abiotic stress responses. Current Opinion in Plant Biology 2010 13 2 132 138 2-s2.0-77951687828 10.1016/j.pbi.2009.12.006
    • (2010) Current Opinion in Plant Biology , vol.13 , Issue.2 , pp. 132-138
    • Urano, K.1    Kurihara, Y.2    Seki, M.3    Shinozaki, K.4
  • 2
    • 0014558549 scopus 로고
    • Patterns of convergent and overlapping transcription within the b2 region of coliphage
    • 2-s2.0-0014558549
    • Bøvre K., Szybalski W., Patterns of convergent and overlapping transcription within the b2 region of coliphage Virology 1969 38 4 614 626 2-s2.0-0014558549
    • (1969) Virology , vol.38 , Issue.4 , pp. 614-626
    • Bøvre, K.1    Szybalski, W.2
  • 3
    • 0023008576 scopus 로고
    • Nucleotide sequence and in vivo expression of the ilvY and ilvC genes in Escherichia coli K12. Transcription from divergent overlapping promoters
    • 2-s2.0-0023008576
    • Wek R. C., Hatfield G. W., Nucleotide sequence and in vivo expression of the ilvY and ilvC genes in Escherichia coli K12. Transcription from divergent overlapping promoters. The Journal of Biological Chemistry 1986 261 5 2441 2450 2-s2.0-0023008576
    • (1986) The Journal of Biological Chemistry , vol.261 , Issue.5 , pp. 2441-2450
    • Wek, R.C.1    Hatfield, G.W.2
  • 4
    • 0023449101 scopus 로고
    • Overlapping transcription units in the transient receptor potential locus of Drosophila melanogaster
    • 2-s2.0-0023449101 10.1007/BF01534486
    • Wong F., Yuh Z. T., Schaefer E. L., Roop B. C., Ally A. H., Overlapping transcription units in the transient receptor potential locus of Drosophila melanogaster. Somatic Cell and Molecular Genetics 1987 13 6 661 669 2-s2.0-0023449101 10.1007/BF01534486
    • (1987) Somatic Cell and Molecular Genetics , vol.13 , Issue.6 , pp. 661-669
    • Wong, F.1    Yuh, Z.T.2    Schaefer, E.L.3    Roop, B.C.4    Ally, A.H.5
  • 5
    • 29244490062 scopus 로고    scopus 로고
    • Endogenous siRNAs derived from a pair of natural cis -antisense transcripts regulate salt tolerance in Arabidopsis
    • 2-s2.0-29244490062 10.1016/j.cell.2005.11.035
    • Borsani O., Zhu J., Verslues P. E., Sunkar R., Zhu J.-K., Endogenous siRNAs derived from a pair of natural cis -antisense transcripts regulate salt tolerance in Arabidopsis. Cell 2005 123 7 1279 1291 2-s2.0-29244490062 10.1016/j.cell.2005.11.035
    • (2005) Cell , vol.123 , Issue.7 , pp. 1279-1291
    • Borsani, O.1    Zhu, J.2    Verslues, P.E.3    Sunkar, R.4    Zhu, J.-K.5
  • 6
    • 69249217649 scopus 로고    scopus 로고
    • Regulatory roles of natural antisense transcripts
    • 2-s2.0-69249217649 10.1038/nrm2738
    • Faghihi M. A., Wahlestedt C., Regulatory roles of natural antisense transcripts. Nature Reviews Molecular Cell Biology 2009 10 9 637 643 2-s2.0-69249217649 10.1038/nrm2738
    • (2009) Nature Reviews Molecular Cell Biology , vol.10 , Issue.9 , pp. 637-643
    • Faghihi, M.A.1    Wahlestedt, C.2
  • 8
    • 84862209063 scopus 로고    scopus 로고
    • PlantNATsDB: A comprehensive database of plant natural antisense transcripts
    • 10.1093/nar/gkr823
    • Chen D., Yuan C., Zhang J., Zhang Z., Bai L., Meng Y., Chen L. -., Chen M., PlantNATsDB: A comprehensive database of plant natural antisense transcripts. Nucleic Acids Research 2012 40 1 D1187 D1193 10.1093/nar/gkr823
    • (2012) Nucleic Acids Research , vol.40 , Issue.1
    • Chen, D.1    Yuan, C.2    Zhang, J.3    Zhang, Z.4    Bai, L.5    Meng, Y.6    Chen, L.-.7    Chen, M.8
  • 13
    • 24644448635 scopus 로고    scopus 로고
    • Genome-wide prediction and identification of cis -natural antisense transcripts in Arabidopsis thaliana
    • 2-s2.0-24644448635
    • Wang X.-J., Gaasterland T., Chua N.-H., Genome-wide prediction and identification of cis -natural antisense transcripts in Arabidopsis thaliana. Genome Biology 2005 6, article R30 2-s2.0-24644448635
    • (2005) Genome Biology , vol.630
    • Wang, X.-J.1    Gaasterland, T.2    Chua, N.-H.3
  • 14
    • 24644488895 scopus 로고    scopus 로고
    • Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation
    • 2-s2.0-24644488895
    • Jen C.-H., Michalopoulos I., Westhead D. R., Meyer P., Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation. Genome Biology 2005 6, article R51 2-s2.0-24644488895
    • (2005) Genome Biology , vol.651
    • Jen, C.-H.1    Michalopoulos, I.2    Westhead, D.R.3    Meyer, P.4
  • 15
    • 57849105533 scopus 로고    scopus 로고
    • The antisense transcriptomes of human cells
    • 2-s2.0-57849105533 10.1126/science.1163853
    • He Y., Vogelstein B., Velculescu V. E., Papadopoulos N., Kinzler K. W., The antisense transcriptomes of human cells. Science 2008 322 5909 1855 1857 2-s2.0-57849105533 10.1126/science.1163853
    • (2008) Science , vol.322 , Issue.5909 , pp. 1855-1857
    • He, Y.1    Vogelstein, B.2    Velculescu, V.E.3    Papadopoulos, N.4    Kinzler, K.W.5
  • 16
    • 84979807157 scopus 로고    scopus 로고
    • Long nonprotein-coding RNAs in plants
    • 9 Berlin, Germany Springer
    • Jouannet V., Crespi M., Ugarkovic D., Long nonprotein-coding RNAs in plants. Long Non-Coding RNAs 2011 9 Berlin, Germany Springer 179 200
    • (2011) Long Non-Coding RNAs , pp. 179-200
    • Jouannet, V.1    Crespi, M.2    Ugarkovic, D.3
  • 17
    • 26944454054 scopus 로고    scopus 로고
    • Evidence for a preferential targeting of 3′-UTRs by cis -encoded natural antisense transcripts
    • 2-s2.0-26944454054 10.1093/nar/gki852
    • Sun M., Hurst L. D., Carmichael G. G., Chen J., Evidence for a preferential targeting of 3′-UTRs by cis -encoded natural antisense transcripts. Nucleic Acids Research 2005 33 17 5533 5543 2-s2.0-26944454054 10.1093/nar/gki852
    • (2005) Nucleic Acids Research , vol.33 , Issue.17 , pp. 5533-5543
    • Sun, M.1    Hurst, L.D.2    Carmichael, G.G.3    Chen, J.4
  • 18
    • 44649124293 scopus 로고    scopus 로고
    • Small RNAs tell big stories in Whistler
    • 2-s2.0-44649124293 10.1038/ncb0608-630
    • Seila A. C., Sharp P. A., Small RNAs tell big stories in Whistler. Nature Cell Biology 2008 10 6 630 633 2-s2.0-44649124293 10.1038/ncb0608-630
    • (2008) Nature Cell Biology , vol.10 , Issue.6 , pp. 630-633
    • Seila, A.C.1    Sharp, P.A.2
  • 20
    • 2942574509 scopus 로고    scopus 로고
    • Transcriptional interference between convergent promoters caused by elongation over the promoter
    • 2-s2.0-2942574509 10.1016/j.molcel.2004.05.010
    • Callen B. P., Shearwin K. E., Egan J. B., Transcriptional interference between convergent promoters caused by elongation over the promoter. Molecular Cell 2004 14 5 647 656 2-s2.0-2942574509 10.1016/j.molcel.2004.05.010
    • (2004) Molecular Cell , vol.14 , Issue.5 , pp. 647-656
    • Callen, B.P.1    Shearwin, K.E.2    Egan, J.B.3
  • 21
    • 0020491068 scopus 로고
    • Regulation of transcription from tandem and convergent promoters
    • 2-s2.0-0020491068 10.1093/nar/10.18.5447
    • Horowitz H., Platt T., Regulation of transcription from tandem and convergent promoters. Nucleic Acids Research 1982 10 18 5447 5465 2-s2.0-0020491068 10.1093/nar/10.18.5447
    • (1982) Nucleic Acids Research , vol.10 , Issue.18 , pp. 5447-5465
    • Horowitz, H.1    Platt, T.2
  • 22
    • 0037673656 scopus 로고    scopus 로고
    • Antisense transcripts with FANTOM2 clone set and their implications for gene regulation
    • 2-s2.0-0037673656 10.1101/gr.982903
    • Kiyosawa H., Yamanaka I., Osato N., Kondo S., Arakawa T., Carninci P., Kawai J., Hayashizaki Y., Antisense transcripts with FANTOM2 clone set and their implications for gene regulation. Genome Research 2003 13 6 1324 1334 2-s2.0-0037673656 10.1101/gr.982903
    • (2003) Genome Research , vol.13 , Issue.6 , pp. 1324-1334
    • Kiyosawa, H.1    Yamanaka, I.2    Osato, N.3    Kondo, S.4    Arakawa, T.5    Carninci, P.6    Kawai, J.7    Hayashizaki, Y.8
  • 23
    • 4444376317 scopus 로고    scopus 로고
    • Over 20% of human transcripts might form sense-antisense pairs
    • 2-s2.0-4444376317 10.1093/nar/gkh818
    • Chen J., Sun M., Kent W. J., Huang X., Xie H., Wang W., Zhou G., Shi R. Z., Rowley J. D., Over 20% of human transcripts might form sense-antisense pairs. Nucleic Acids Research 2004 32 16 4812 4820 2-s2.0-4444376317 10.1093/nar/gkh818
    • (2004) Nucleic Acids Research , vol.32 , Issue.16 , pp. 4812-4820
    • Chen, J.1    Sun, M.2    Kent, W.J.3    Huang, X.4    Xie, H.5    Wang, W.6    Zhou, G.7    Shi, R.Z.8    Rowley, J.D.9
  • 25
    • 34250743796 scopus 로고    scopus 로고
    • Transcriptional interferences in cis -natural antisense transcripts of humans and mice
    • 2-s2.0-34250743796 10.1534/genetics.106.069484
    • Osato N., Suzuki Y., Ikeo K., Gojobori T., Transcriptional interferences in cis -natural antisense transcripts of humans and mice. Genetics 2007 176 2 1299 1306 2-s2.0-34250743796 10.1534/genetics.106.069484
    • (2007) Genetics , vol.176 , Issue.2 , pp. 1299-1306
    • Osato, N.1    Suzuki, Y.2    Ikeo, K.3    Gojobori, T.4
  • 26
    • 0036307006 scopus 로고    scopus 로고
    • Overlapping antisense transcription in the human genome
    • 2-s2.0-0036307006 10.1002/cfg.173
    • Fahey M. E., Moore T. F., Higgins D. G., Overlapping antisense transcription in the human genome. Comparative and Functional Genomics 2002 3 3 244 253 2-s2.0-0036307006 10.1002/cfg.173
    • (2002) Comparative and Functional Genomics , vol.3 , Issue.3 , pp. 244-253
    • Fahey, M.E.1    Moore, T.F.2    Higgins, D.G.3
  • 27
    • 0036468258 scopus 로고    scopus 로고
    • Antisense transcripts in the human genome
    • 2-s2.0-0036468258 10.1016/S0168-9525(02)02598-2
    • Lehner B., Williams G., Campbell R. D., Sanderson C. M., Antisense transcripts in the human genome. Trends in Genetics 2002 18 2 63 65 2-s2.0-0036468258 10.1016/S0168-9525(02)02598-2
    • (2002) Trends in Genetics , vol.18 , Issue.2 , pp. 63-65
    • Lehner, B.1    Williams, G.2    Campbell, R.D.3    Sanderson, C.M.4
  • 28
    • 0347356348 scopus 로고    scopus 로고
    • Systematic identification of sense-antisense transcripts in mammalian cells
    • 2-s2.0-0347356348 10.1038/nbt925
    • Røsok Ø., Sioud M., Systematic identification of sense-antisense transcripts in mammalian cells. Nature Biotechnology 2004 22 1 104 108 2-s2.0-0347356348 10.1038/nbt925
    • (2004) Nature Biotechnology , vol.22 , Issue.1 , pp. 104-108
    • Røsok, O.1    Sioud, M.2
  • 29
    • 50849129426 scopus 로고    scopus 로고
    • Trans -natural antisense transcripts including noncoding RNAs in 10 species: Implications for expression regulation
    • 2-s2.0-50849129426 10.1093/nar/gkn470
    • Li J.-T., Zhang Y., Kong L., Liu Q.-R., Wei L., Trans -natural antisense transcripts including noncoding RNAs in 10 species: implications for expression regulation. Nucleic Acids Research 2008 36 15 4833 4844 2-s2.0-50849129426 10.1093/nar/gkn470
    • (2008) Nucleic Acids Research , vol.36 , Issue.15 , pp. 4833-4844
    • Li, J.-T.1    Zhang, Y.2    Kong, L.3    Liu, Q.-R.4    Wei, L.5
  • 30
    • 33845395154 scopus 로고    scopus 로고
    • Prediction of trans -antisense transcripts in Arabidopsis thaliana
    • ARTICLE R92, 2-s2.0-33845395154 10.1186/gb-2006-7-10-r92
    • Wang H., Chua N. H., Wang X. J., Prediction of trans -antisense transcripts in Arabidopsis thaliana. Genome Biology 2006 7 10, article R92 2-s2.0-33845395154 10.1186/gb-2006-7-10-r92
    • (2006) Genome Biology , vol.7 , Issue.10
    • Wang, H.1    Chua, N.H.2    Wang, X.J.3
  • 32
    • 38549133553 scopus 로고    scopus 로고
    • Human cis -natural antisense transcripts initiated by transposable elements
    • 2-s2.0-38549133553 10.1016/j.tig.2007.11.008
    • Conley A. B., Miller W. J., Jordan I. K., Human cis -natural antisense transcripts initiated by transposable elements. Trends in Genetics 2008 24 2 53 56 2-s2.0-38549133553 10.1016/j.tig.2007.11.008
    • (2008) Trends in Genetics , vol.24 , Issue.2 , pp. 53-56
    • Conley, A.B.1    Miller, W.J.2    Jordan, I.K.3
  • 33
    • 15544380198 scopus 로고    scopus 로고
    • Naturally occurring antisense: Transcriptional leakage or real overlap?
    • 2-s2.0-15544380198 10.1101/gr.3308405
    • Dahary D., Elroy-Stein O., Sorek R., Naturally occurring antisense: Transcriptional leakage or real overlap? Genome Research 2005 15 3 364 368 2-s2.0-15544380198 10.1101/gr.3308405
    • (2005) Genome Research , vol.15 , Issue.3 , pp. 364-368
    • Dahary, D.1    Elroy-Stein, O.2    Sorek, R.3
  • 34
    • 78049336053 scopus 로고    scopus 로고
    • Pseudogenes as an alternative source of natural antisense transcripts
    • ARTICLE 338, 2-s2.0-78049336053 10.1186/1471-2148-10-338
    • Muro E. M., Andrade-Navarro M. A., Pseudogenes as an alternative source of natural antisense transcripts. BMC Evolutionary Biology 2010 10 1, article 338 2-s2.0-78049336053 10.1186/1471-2148-10-338
    • (2010) BMC Evolutionary Biology , vol.10 , Issue.1
    • Muro, E.M.1    Andrade-Navarro, M.A.2
  • 35
    • 33746785696 scopus 로고    scopus 로고
    • Genome-wide in silico identification and analysis of cis -natural antisense transcripts (cis -NATs) in ten species
    • 2-s2.0-33746785696
    • Zhang Y., Liu X. S., Liu Q.-R., Wei L., Genome-wide in silico identification and analysis of cis -natural antisense transcripts (cis -NATs) in ten species. Nucleic acids research 2006 34 12 3465 3475 2-s2.0-33746785696
    • (2006) Nucleic acids research , vol.34 , Issue.12 , pp. 3465-3475
    • Zhang, Y.1    Liu, X.S.2    Liu, Q.-R.3    Wei, L.4
  • 36
    • 34248162440 scopus 로고    scopus 로고
    • Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
    • 2-s2.0-34248162440 10.1101/gr.6036807
    • Ponjavic J., Ponting C. P., Lunter G., Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs. Genome Research 2007 17 5 556 565 2-s2.0-34248162440 10.1101/gr.6036807
    • (2007) Genome Research , vol.17 , Issue.5 , pp. 556-565
    • Ponjavic, J.1    Ponting, C.P.2    Lunter, G.3
  • 37
    • 84875754164 scopus 로고    scopus 로고
    • Protein-coding cis -natural antisense transcripts have high and broad expression in Arabidopsis
    • 10.1104/pp.112.212100
    • Zhan S., Lukens L., Protein-coding cis -natural antisense transcripts have high and broad expression in Arabidopsis. Plant Physiology 2013 161 4 2171 2180 10.1104/pp.112.212100
    • (2013) Plant Physiology , vol.161 , Issue.4 , pp. 2171-2180
    • Zhan, S.1    Lukens, L.2
  • 38
    • 84876320555 scopus 로고    scopus 로고
    • Conserved expression of natural antisense transcripts in mammals
    • 10.1186/1471-2164-14-243
    • Ling M. H. T., Ban Y., Wen H., Wang S. M., Ge S. X., Conserved expression of natural antisense transcripts in mammals. BMC Genomics 2013 14, article 243 10.1186/1471-2164-14-243
    • (2013) BMC Genomics , pp. 14243
    • Ling, M.H.T.1    Ban, Y.2    Wen, H.3    Wang, S.M.4    Ge, S.X.5
  • 39
    • 84871390926 scopus 로고    scopus 로고
    • Strand-specific RNA-seq reveals widespread occurrence of novel cis -natural antisense transcripts in rice
    • 10.1186/1471-2164-13-721
    • Lu T., Zhu C., Lu G., Strand-specific RNA-seq reveals widespread occurrence of novel cis -natural antisense transcripts in rice. BMC Genomics 2012 13, article 721 10.1186/1471-2164-13-721
    • (2012) BMC Genomics , pp. 13721
    • Lu, T.1    Zhu, C.2    Lu, G.3
  • 41
    • 19444377759 scopus 로고    scopus 로고
    • Transcriptional interference: A crash course
    • 2-s2.0-19444377759 10.1016/j.tig.2005.04.009
    • Shearwin K. E., Callen B. P., Egan J. B., Transcriptional interference: A crash course. Trends in Genetics 2005 21 6 339 345 2-s2.0-19444377759 10.1016/j.tig.2005.04.009
    • (2005) Trends in Genetics , vol.21 , Issue.6 , pp. 339-345
    • Shearwin, K.E.1    Callen, B.P.2    Egan, J.B.3
  • 43
    • 0030712112 scopus 로고    scopus 로고
    • Expression of the thyroid hormone receptor gene, erbA α, in B lymphocytes: Alternative mRNA processing is independent of differentiation but correlates with antisense RNA levels
    • 2-s2.0-0030712112 10.1093/nar/25.21.4296
    • Hastings M. L., Milcarek C., Martincic K., Peterson M. L., Munroe S. H., Expression of the thyroid hormone receptor gene, erbA α in B lymphocytes: Alternative mRNA processing is independent of differentiation but correlates with antisense RNA levels. Nucleic Acids Research 1997 25 21 4296 4300 2-s2.0-0030712112 10.1093/nar/25.21.4296
    • (1997) Nucleic Acids Research , vol.25 , Issue.21 , pp. 4296-4300
    • Hastings, M.L.1    Milcarek, C.2    Martincic, K.3    Peterson, M.L.4    Munroe, S.H.5
  • 44
    • 0035997389 scopus 로고    scopus 로고
    • RNA editing by adenosine deaminases that act on RNA
    • 2-s2.0-0035997389 10.1146/annurev.biochem.71.110601.135501
    • Bass B. L., RNA editing by adenosine deaminases that act on RNA. Annual Review of Biochemistry 2002 71 817 846 2-s2.0-0035997389 10.1146/annurev. biochem.71.110601.135501
    • (2002) Annual Review of Biochemistry , vol.71 , pp. 817-846
    • Bass, B.L.1
  • 45
    • 0035943347 scopus 로고    scopus 로고
    • The fate of dsRNA in the nucleus: A p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs
    • 2-s2.0-0035943347 10.1016/S0092-8674(01)00466-4
    • Zhang Z., Carmichael G. G., The fate of dsRNA in the nucleus: A p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs. Cell 2001 106 4 465 475 2-s2.0-0035943347 10.1016/S0092-8674(01)00466-4
    • (2001) Cell , vol.106 , Issue.4 , pp. 465-475
    • Zhang, Z.1    Carmichael, G.G.2
  • 46
    • 0035422052 scopus 로고    scopus 로고
    • Specific cleavage of hyper-edited dsRNAs
    • 2-s2.0-0035422052 10.1093/emboj/20.15.4243
    • Scadden A. D. J., Smith C. W. J., Specific cleavage of hyper-edited dsRNAs. The EMBO Journal 2001 20 15 4243 4252 2-s2.0-0035422052 10.1093/emboj/20.15.4243
    • (2001) The EMBO Journal , vol.20 , Issue.15 , pp. 4243-4252
    • Scadden, A.D.J.1    Smith, C.W.J.2
  • 47
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
    • 2-s2.0-0032545933 10.1038/35888
    • Fire A., Xu S., Montgomery M. K., Kostas S. A., Driver S. E., Mello C. C., Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 1998 391 6669 806 811 2-s2.0-0032545933 10.1038/35888
    • (1998) Nature , vol.391 , Issue.6669 , pp. 806-811
    • Fire, A.1    Xu, S.2    Montgomery, M.K.3    Kostas, S.A.4    Driver, S.E.5    Mello, C.C.6
  • 48
    • 47249107415 scopus 로고    scopus 로고
    • Processing of naturally occurring sense/antisense transcripts of the vertebrate Slc34a gene into short RNAs
    • 2-s2.0-47249107415 10.1152/physiolgenomics.00004.2008
    • Carlile M., Nalbant P., Preston-Fayers K., McHaffie G. S., Werner A., Processing of naturally occurring sense/antisense transcripts of the vertebrate Slc34a gene into short RNAs. Physiological Genomics 2008 34 1 95 100 2-s2.0-47249107415 10.1152/physiolgenomics.00004.2008
    • (2008) Physiological Genomics , vol.34 , Issue.1 , pp. 95-100
    • Carlile, M.1    Nalbant, P.2    Preston-Fayers, K.3    McHaffie, G.S.4    Werner, A.5
  • 50
    • 77952415941 scopus 로고    scopus 로고
    • Proper regulation of a sperm-specific cis -nat-siRNA is essential for double fertilization in Arabidopsis
    • 2-s2.0-77952415941 10.1101/gad.1882810
    • Ron M., Saez M. A., Williams L. E., Fletcher J. C., McCormick S., Proper regulation of a sperm-specific cis -nat-siRNA is essential for double fertilization in Arabidopsis. Genes and Development 2010 24 10 1010 1021 2-s2.0-77952415941 10.1101/gad.1882810
    • (2010) Genes and Development , vol.24 , Issue.10 , pp. 1010-1021
    • Ron, M.1    Saez, M.A.2    Williams, L.E.3    Fletcher, J.C.4    McCormick, S.5
  • 51
    • 0038581890 scopus 로고    scopus 로고
    • Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease
    • 2-s2.0-0038581890 10.1038/ng1157
    • Tufarelli C., Stanley J. A., Garrick D., Sharpe J. A., Ayyub H., Wood W. G., Higgs D. R., Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease. Nature Genetics 2003 34 2 157 165 2-s2.0-0038581890 10.1038/ng1157
    • (2003) Nature Genetics , vol.34 , Issue.2 , pp. 157-165
    • Tufarelli, C.1    Stanley, J.A.2    Garrick, D.3    Sharpe, J.A.4    Ayyub, H.5    Wood, W.G.6    Higgs, D.R.7
  • 53
    • 84880168178 scopus 로고    scopus 로고
    • NCBI (National Center for Biotechnology Information). ESTs: Gene Discovery made easier, 2011
    • NCBI (National Center for Biotechnology Information). ESTs: Gene Discovery made easier, 2011, http://www.ncbi.nlm.nih.gov/About/primer/est.html
  • 54
    • 80053064498 scopus 로고    scopus 로고
    • A strand-specific library preparation protocol for RNA sequencing
    • 2-s2.0-80053064498 10.1016/B978-0-12-385118-5.00005-0
    • Borodina T., Adjaye J., Sultan M., A strand-specific library preparation protocol for RNA sequencing. Methods in Enzymology 2011 500 79 98 2-s2.0-80053064498 10.1016/B978-0-12-385118-5.00005-0
    • (2011) Methods in Enzymology , vol.500 , pp. 79-98
    • Borodina, T.1    Adjaye, J.2    Sultan, M.3
  • 55
    • 61449191758 scopus 로고    scopus 로고
    • Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa
    • 2-s2.0-61449191758 10.1101/gr.084806.108
    • Zhou X., Sunkar R., Jin H., Zhu J.-K., Zhang W., Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa. Genome Research 2009 19 1 70 78 2-s2.0-61449191758 10.1101/gr.084806.108
    • (2009) Genome Research , vol.19 , Issue.1 , pp. 70-78
    • Zhou, X.1    Sunkar, R.2    Jin, H.3    Zhu, J.-K.4    Zhang, W.5
  • 56
    • 0028789793 scopus 로고
    • Serial analysis of gene expression
    • 2-s2.0-0028789793
    • Velculescu V. E., Zhang L., Vogelstein B., Kinzler K. W., Serial analysis of gene expression. Science 1995 270 5235 484 487 2-s2.0-0028789793
    • (1995) Science , vol.270 , Issue.5235 , pp. 484-487
    • Velculescu, V.E.1    Zhang, L.2    Vogelstein, B.3    Kinzler, K.W.4
  • 59
    • 1642506317 scopus 로고    scopus 로고
    • Robust-LongSAGE (RL-SAGE): A substantially improved LongSAGE method for gene discovery and transcriptome analysis
    • 2-s2.0-1642506317 10.1104/pp.103.034496
    • Gowda M., Jantasuriyarat C., Dean R. A., Wang G. L., Robust-LongSAGE (RL-SAGE): A substantially improved LongSAGE method for gene discovery and transcriptome analysis. Plant Physiology 2004 134 3 890 897 2-s2.0-1642506317 10.1104/pp.103.034496
    • (2004) Plant Physiology , vol.134 , Issue.3 , pp. 890-897
    • Gowda, M.1    Jantasuriyarat, C.2    Dean, R.A.3    Wang, G.L.4
  • 61
    • 68849126961 scopus 로고    scopus 로고
    • Gene expression profiling via LongSAGE in a non-model plant species: A case study in seeds of Brassica napus
    • 2-s2.0-68849126961 10.1186/1471-2164-10-295
    • Obermeier C., Hosseini B., Friedt W., Snowdon R., Gene expression profiling via LongSAGE in a non-model plant species: A case study in seeds of Brassica napus. BMC Genomics 2009 10, article 295 2-s2.0-68849126961 10.1186/1471-2164-10-295
    • (2009) BMC Genomics , pp. 10295
    • Obermeier, C.1    Hosseini, B.2    Friedt, W.3    Snowdon, R.4
  • 62
    • 67849105060 scopus 로고    scopus 로고
    • Naturally occurring antisense RNA: function and mechanisms of action
    • 2-s2.0-67849105060 10.1097/MNH.0b013e32832cb982
    • Werner A., Sayer J. A., Naturally occurring antisense RNA: function and mechanisms of action. Current Opinion in Nephrology and Hypertension 2009 18 4 343 349 2-s2.0-67849105060 10.1097/MNH.0b013e32832cb982
    • (2009) Current Opinion in Nephrology and Hypertension , vol.18 , Issue.4 , pp. 343-349
    • Werner, A.1    Sayer, J.A.2
  • 63
    • 58149293709 scopus 로고    scopus 로고
    • SuperSAGE: A modern platform for genome-wide quantitative transcript profiling
    • 2-s2.0-58149293709 10.2174/138920108785915157
    • Matsumura H., Krüger D. H., Kahl G., Terauchi R., SuperSAGE: A modern platform for genome-wide quantitative transcript profiling. Current Pharmaceutical Biotechnology 2008 9 5 368 374 2-s2.0-58149293709 10.2174/138920108785915157
    • (2008) Current Pharmaceutical Biotechnology , vol.9 , Issue.5 , pp. 368-374
    • Matsumura, H.1    Krüger, D.H.2    Kahl, G.3    Terauchi, R.4
  • 67
    • 1642563198 scopus 로고    scopus 로고
    • Global transcript analysis of rice leaf and seed using SAGE technology
    • 10.1046/j.1467-7652.2003.00026.x
    • Gibbings J. G., Cook B. P., Dufault M. R., Global transcript analysis of rice leaf and seed using SAGE technology. Plant Biotechnology Journal 2003 1 4 271 285 10.1046/j.1467-7652.2003.00026.x
    • (2003) Plant Biotechnology Journal , vol.1 , Issue.4 , pp. 271-285
    • Gibbings, J.G.1    Cook, B.P.2    Dufault, M.R.3
  • 68
    • 17644371012 scopus 로고    scopus 로고
    • Comparison of the transcript profiles from the root and the nodulating root of the model legume Lotus japonicus by serial analysis of gene expression
    • 2-s2.0-17644371012 10.1094/MPMI-18-0487
    • Asamizu E., Nakamura Y., Sato S., Tabata S., Comparison of the transcript profiles from the root and the nodulating root of the model legume Lotus japonicus by serial analysis of gene expression. Molecular Plant-Microbe Interactions 2005 18 5 487 498 2-s2.0-17644371012 10.1094/MPMI-18-0487
    • (2005) Molecular Plant-Microbe Interactions , vol.18 , Issue.5 , pp. 487-498
    • Asamizu, E.1    Nakamura, Y.2    Sato, S.3    Tabata, S.4
  • 69
    • 33947140919 scopus 로고    scopus 로고
    • Serial analysis of gene expression in sugarcane (Saccharum spp.) leaves revealed alternative C4 metabolism and putative antisense transcripts
    • 2-s2.0-33947140919 10.1007/s11103-006-9121-z
    • Calsa T. Jr., Figueira A., Serial analysis of gene expression in sugarcane (Saccharum spp.) leaves revealed alternative C4 metabolism and putative antisense transcripts. Plant Molecular Biology 2007 63 6 745 762 2-s2.0-33947140919 10.1007/s11103-006-9121-z
    • (2007) Plant Molecular Biology , vol.63 , Issue.6 , pp. 745-762
    • Calsa Jr., T.1    Figueira, A.2
  • 71
    • 33645501721 scopus 로고    scopus 로고
    • Abundant transcripts of malting barley identified by serial analysis of gene expression (SAGE)
    • 2-s2.0-33645501721 10.1111/j.1467-7652.2006.00181.x
    • White J., Pacey-Miller T., Crawford A., Cordeiro G., Barbary D., Bundock P., Henry R., Abundant transcripts of malting barley identified by serial analysis of gene expression (SAGE). Plant Biotechnology Journal 2006 4 3 289 301 2-s2.0-33645501721 10.1111/j.1467-7652.2006.00181.x
    • (2006) Plant Biotechnology Journal , vol.4 , Issue.3 , pp. 289-301
    • White, J.1    Pacey-Miller, T.2    Crawford, A.3    Cordeiro, G.4    Barbary, D.5    Bundock, P.6    Henry, R.7
  • 72
    • 54049094030 scopus 로고    scopus 로고
    • Differential SAGE analysis in Arabidopsis uncovers increased transcriptome complexity in response to low temperature
    • 2-s2.0-54049094030 10.1186/1471-2164-9-434
    • Robinson S. J., Parkin I. A. P., Differential SAGE analysis in Arabidopsis uncovers increased transcriptome complexity in response to low temperature. BMC Genomics 2008 9, article 434 2-s2.0-54049094030 10.1186/1471-2164-9-434
    • (2008) BMC Genomics , vol.9434
    • Robinson, S.J.1    Parkin, I.A.P.2
  • 73
    • 34548112344 scopus 로고    scopus 로고
    • Use of robust-long serial analysis of gene expression to identify novel fungal and plant genes involved in host-pathogen interactions
    • 2-s2.0-34548112344
    • Gowda M., Venu R. C., Jia Y., Stahlberg E., Pampanwar V., Soderlund C., Wang G.-L., Use of robust-long serial analysis of gene expression to identify novel fungal and plant genes involved in host-pathogen interactions. Methods in Molecular Biology 2007 354 131 144 2-s2.0-34548112344
    • (2007) Methods in Molecular Biology , vol.354 , pp. 131-144
    • Gowda, M.1    Venu, R.C.2    Jia, Y.3    Stahlberg, E.4    Pampanwar, V.5    Soderlund, C.6    Wang, G.-L.7
  • 74
    • 27744588362 scopus 로고    scopus 로고
    • Global transcript profiling of potato tuber using LongSAGE
    • 2-s2.0-27744588362 10.1111/j.1467-7652.2005.00115.x
    • Nielsen K. L., Grønkjær K., Welinder K. G., Emmersen J., Global transcript profiling of potato tuber using LongSAGE. Plant Biotechnology Journal 2005 3 2 175 185 2-s2.0-27744588362 10.1111/j.1467-7652.2005.00115.x
    • (2005) Plant Biotechnology Journal , vol.3 , Issue.2 , pp. 175-185
    • Nielsen, K.L.1    Grønkjær, K.2    Welinder, K.G.3    Emmersen, J.4
  • 75
    • 84862023238 scopus 로고    scopus 로고
    • Identification of sense and antisense transcripts regulated by drought in sugarcane
    • 10.1007/s11103-012-9922-1
    • Lembke C. G., Nishiyama M. Y. Jr., Sato P. M., de Andrade R. F., Souza G. M., Identification of sense and antisense transcripts regulated by drought in sugarcane. Plant Molecular Biology 2012 79 4-5 461 477 10.1007/s11103-012-9922-1 Tecnologico
    • (2012) Plant Molecular Biology , vol.79 , Issue.4-5 , pp. 461-477
    • Lembke, C.G.1    Nishiyama Jr., M.Y.2    Sato, P.M.3    De Andrade, R.F.4    Souza, G.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.