-
2
-
-
0032900678
-
Median-joining networks for inferring intraspecific phylogenies
-
Bandelt, H.-J. et al. (1999) Median-joining networks for inferring intraspecific phylogenies. Mol. Biol. Evol., 16, 37-48.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 37-48
-
-
Bandelt, H.-J.1
-
3
-
-
18744366364
-
Mtreemix: A software package for learning and using mixture models of mutagenetic trees
-
Beerenwinkel, N. et al. (2005) Mtreemix: A software package for learning and using mixture models of mutagenetic trees. Bioinformatics, 21, 2106-2107.
-
(2005)
Bioinformatics
, vol.21
, pp. 2106-2107
-
-
Beerenwinkel, N.1
-
4
-
-
0028245813
-
Cadherin expression in carcinomas: Role in the formation of cell junctions and the prevention of invasiveness
-
Birchmeier, W. and Behrens, J. (1994) Cadherin expression in carcinomas: Role in the formation of cell junctions and the prevention of invasiveness. Biochim. Biophys. Acta, 1198, 11-26.
-
(1994)
Biochim. Biophys. Acta
, vol.1198
, pp. 11-26
-
-
Birchmeier, W.1
Behrens, J.2
-
5
-
-
84869451873
-
Effects of three decades of screening mammography on breast-cancer incidence
-
Bleyer, A. and Welch, G. (2012) Effects of three decades of screening mammography on breast-cancer incidence. New Engl. J. Med., 367, 1998-2005.
-
(2012)
New Engl. J. Med.
, vol.367
, pp. 1998-2005
-
-
Bleyer, A.1
Welch, G.2
-
6
-
-
0023678983
-
Pathological prognostic indicators in cervical cancer with particular reference to patients under the age of 40 years
-
Buckley, C.H. et al. (1988) Pathological prognostic indicators in cervical cancer with particular reference to patients under the age of 40 years. Br. J. Obstet. Gyncol., 9, 47-56.
-
(1988)
Br. J. Obstet. Gyncol.
, vol.9
, pp. 47-56
-
-
Buckley, C.H.1
-
7
-
-
0033388315
-
Genetic instability and darwinian selection in tumours
-
Cahill, D.P. et al. (1999) Genetic instability and darwinian selection in tumours. Trends Cell Biol., 9, M67-M60.
-
(1999)
Trends Cell Biol.
, vol.9
-
-
Cahill, D.P.1
-
8
-
-
84857475740
-
A mathematical methodology for determining the temporal order of pathway alterations arising during gliomagenesis
-
Cheng, Y.-K. et al. (2012) A mathematical methodology for determining the temporal order of pathway alterations arising during gliomagenesis. PLoS Comput. Biol., 8, e1002337.
-
(2012)
PLoS Comput. Biol.
, vol.8
-
-
Cheng, Y.-K.1
-
9
-
-
0032894615
-
Inferring tree models of oncogenesis from comparative genomic hybridization data
-
Desper, R. et al. (1999) Inferring tree models of oncogenesis from comparative genomic hybridization data. J. Comp. Biol., 6, 37-51.
-
(1999)
J. Comp. Biol.
, vol.6
, pp. 37-51
-
-
Desper, R.1
-
10
-
-
84981632113
-
The Steiner problem in graphs
-
Dreyfus, S.E. and Wagner, R.A. (1971) The Steiner problem in graphs. Networks, 1, 195-207.
-
(1971)
Networks
, vol.1
, pp. 195-207
-
-
Dreyfus, S.E.1
Wagner, R.A.2
-
11
-
-
0027407726
-
Prognostic factors and therapeutic decisions in axillary node-negative breast cancer
-
Elledge, R.M. and McGuire, W.L. (1993) Prognostic factors and therapeutic decisions in axillary node-negative breast cancer. Annu. Rev. Med., 44, 201-210.
-
(1993)
Annu. Rev. Med.
, vol.44
, pp. 201-210
-
-
Elledge, R.M.1
McGuire, W.L.2
-
12
-
-
9444236895
-
Minireview: Cyclin D1: Normal and abnormal functions
-
Fu, M. et al. (2004) Minireview: Cyclin D1: Normal and abnormal functions. Endocrinology, 145, 5439-5447.
-
(2004)
Endocrinology
, vol.145
, pp. 5439-5447
-
-
Fu, M.1
-
13
-
-
0000727336
-
The rectilinear Steiner tree problem is NPcomplete
-
Garey, M.R. and Johnson, D.S. (1977) The rectilinear Steiner tree problem is NPcomplete. SIAM J. Appl. Math., 32, 826-834.
-
(1977)
SIAM J. Appl. Math.
, vol.32
, pp. 826-834
-
-
Garey, M.R.1
Johnson, D.S.2
-
14
-
-
84863393080
-
Intratumor heterogeneity and branched evolution revealed by multiregion sequencing
-
Gerlinger, M. et al. (2012) Intratumor heterogeneity and branched evolution revealed by multiregion sequencing. New Engl. J. Med., 366, 883-892.
-
(2012)
New Engl. J. Med.
, vol.366
, pp. 883-892
-
-
Gerlinger, M.1
-
15
-
-
70350672603
-
Quantifying cancer progression with conjunctive Bayesian networks
-
Gerstung, M. et al. (2009) Quantifying cancer progression with conjunctive Bayesian networks. Bioinformatics, 25, 2809-2815.
-
(2009)
Bioinformatics
, vol.25
, pp. 2809-2815
-
-
Gerstung, M.1
-
16
-
-
84863393305
-
Estimation of rearrangement phylogeny for cancer genomes
-
Greenman, C.D. et al. (2012) Estimation of rearrangement phylogeny for cancer genomes. Genome Res., 22, 346-361.
-
(2012)
Genome Res.
, vol.22
, pp. 346-361
-
-
Greenman, C.D.1
-
17
-
-
18644364411
-
DBC2 a candidate for a tumor suppressor gene involved in breast cancer
-
Hamaguchi, M. et al. (2002) DBC2, a candidate for a tumor suppressor gene involved in breast cancer. Proc. Natl. Acad. Sci. USA, 99, 13647-13652.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 13647-13652
-
-
Hamaguchi, M.1
-
18
-
-
0000814769
-
On Steiner's problem with rectilinear distance
-
Hanan, M. (1966) On Steiner's problem with rectilinear distance. SIAM J. Appl. Math., 14, 255-265.
-
(1966)
SIAM J. Appl. Math.
, vol.14
, pp. 255-265
-
-
Hanan, M.1
-
19
-
-
0037089534
-
Detection of chromosomal aneuploidies and gene copy number changes in fine needle aspirates is a specific, sensitive, and objective genetic test for the diagnosis of breast cancer
-
Heselmeyer-Haddad, K. et al. (2002) Detection of chromosomal aneuploidies and gene copy number changes in fine needle aspirates is a specific, sensitive, and objective genetic test for the diagnosis of breast cancer. Cancer Res., 62, 2365-2369.
-
(2002)
Cancer Res.
, vol.62
, pp. 2365-2369
-
-
Heselmeyer-Haddad, K.1
-
20
-
-
84868214754
-
Single-cell genetic analysis of ductal carcinoma in situ and invasive breast cancer reveals enormous tumor heterogeneity, yet conserved genomic imbalances and gain of MYC during progression
-
Heselmeyer-Haddad, K. et al. (2012) Single-cell genetic analysis of ductal carcinoma in situ and invasive breast cancer reveals enormous tumor heterogeneity, yet conserved genomic imbalances and gain of MYC during progression. Am. J. Pathol., 181, 1807-1822.
-
(2012)
Am. J. Pathol.
, vol.181
, pp. 1807-1822
-
-
Heselmeyer-Haddad, K.1
-
21
-
-
0034947506
-
Cyclooxygenase-2: A target for the prevention and treatment of breast cancer
-
Howe, L.R. et al. (2001) Cyclooxygenase-2: A target for the prevention and treatment of breast cancer. Endocr. Relat. Cancer, 8, 97-114.
-
(2001)
Endocr. Relat. Cancer
, vol.8
, pp. 97-114
-
-
Howe, L.R.1
-
22
-
-
33748570853
-
Semi-quantitative fluorescent PCR analysis identifies PRKAA1 on chromosome 5 as a potential candidate cancer gene of cervical cancer
-
Huang, F.Y. et al. (2006) Semi-quantitative fluorescent PCR analysis identifies PRKAA1 on chromosome 5 as a potential candidate cancer gene of cervical cancer. Gynecol. Oncol., 103, 219-225.
-
(2006)
Gynecol. Oncol.
, vol.103
, pp. 219-225
-
-
Huang, F.Y.1
-
23
-
-
0035875106
-
Distinctive patterns of Her-2/neu c-myc, and cyclin D1 gene amplification by fluorescence in situ hybridization in primary breast cancers
-
Janocko, L.E. et al. (2001) Distinctive patterns of Her-2/neu c-myc, and cyclin D1 gene amplification by fluorescence in situ hybridization in primary breast cancers. Cytometry, 46, 136-149.
-
(2001)
Cytometry
, vol.46
, pp. 136-149
-
-
Janocko, L.E.1
-
24
-
-
25444518176
-
Overexpression of LAMP3/TSC403/DC-LAMP promotes metastasis in uterine cervical cancer
-
Kanao, H. et al. (2005) Overexpression of LAMP3/TSC403/DC-LAMP promotes metastasis in uterine cervical cancer. Cancer Res., 65, 8640-8645.
-
(2005)
Cancer Res.
, vol.65
, pp. 8640-8645
-
-
Kanao, H.1
-
25
-
-
0039986425
-
Solving Steiner tree problems in rgaphs to optimality
-
Koch, T. and Martin, A. (1998) Solving Steiner tree problems in rgaphs to optimality. Networks, 32, 207-232.
-
(1998)
Networks
, vol.32
, pp. 207-232
-
-
Koch, T.1
Martin, A.2
-
26
-
-
84861525734
-
A metric for phylogenetic trees based on matching
-
Lin, Y. et al. (2012) A metric for phylogenetic trees based on matching. IEEE/ACM Trans. Comput. Biol. Bioinform, 9, 1014-1022.
-
(2012)
IEEE/ACM Trans Comput. Biol. Bioinform
, vol.9
, pp. 1014-1022
-
-
Lin, Y.1
-
27
-
-
84866322681
-
Evolutionary pathways in BRCA1-associated breast tumors
-
Martins, F.C. et al. (2012) Evolutionary pathways in BRCA1-associated breast tumors. Cancer Discov., 2, 503-511.
-
(2012)
Cancer Discov.
, vol.2
, pp. 503-511
-
-
Martins, F.C.1
-
28
-
-
74949101897
-
Inferring tumor progression from genomic heterogeneity
-
Navin, N. et al. (2010) Inferring tumor progression from genomic heterogeneity. Genome Res., 20, 68-80.
-
(2010)
Genome Res.
, vol.20
, pp. 68-80
-
-
Navin, N.1
-
29
-
-
79953766940
-
Tumour evolution inferred by single-cell sequencing
-
Navin, N. et al. (2011) Tumour evolution inferred by single-cell sequencing. Nature, 472, 90-94.
-
(2011)
Nature
, vol.472
, pp. 90-94
-
-
Navin, N.1
-
30
-
-
0035866390
-
The ZNF217 gene amplified in breast cancers promotes immortalization of human mammary epithelial cells
-
Nonet, G.H. et al. (2001) The ZNF217 gene amplified in breast cancers promotes immortalization of human mammary epithelial cells. Cancer Res., 61, 1250-1254.
-
(2001)
Cancer Res.
, vol.61
, pp. 1250-1254
-
-
Nonet, G.H.1
-
31
-
-
0017167185
-
The clonal evolution of tumor cell populations
-
Nowell, P.C. (1976) The clonal evolution of tumor cell populations. Science, 194, 23-28.
-
(1976)
Science
, vol.194
, pp. 23-28
-
-
Nowell, P.C.1
-
32
-
-
76649128993
-
Cellular and genetic diversity in the progression of in situ human breast carcinomas to an invasive phenotype
-
Park, S.Y. et al. (2010) Cellular and genetic diversity in the progression of in situ human breast carcinomas to an invasive phenotype. J. Clin. Invest., 120, 636-644.
-
(2010)
J. Clin. Invest.
, vol.120
, pp. 636-644
-
-
Park, S.Y.1
-
33
-
-
34347403659
-
Reconstructing tumor phylogenies from heterogeneous single-cell data
-
Pennington, G. et al. (2007) Reconstructing tumor phylogenies from heterogeneous single-cell data. J. Bioinform. Comput. Biol., 5, 407-427.
-
(2007)
J. Bioinform. Comput. Biol.
, vol.5
, pp. 407-427
-
-
Pennington, G.1
-
34
-
-
0035885223
-
Improved algorithms for the Steiner problem in networks
-
Polzin, T. and Daneshmand, S.V. (2001) Improved algorithms for the Steiner problem in networks. Discrete Appl. Math., 112, 263-300.
-
(2001)
Discrete Appl. Math.
, vol.112
, pp. 263-300
-
-
Polzin, T.1
Daneshmand, S.V.2
-
35
-
-
84864146822
-
Cell lineage analysis of acute leukemia relapse uncovers the role of replication-rate heterogeneity and microsatellite instability
-
Shlush, L.I. et al. (2012) Cell lineage analysis of acute leukemia relapse uncovers the role of replication-rate heterogeneity and microsatellite instability. Blood, 120, 603-612.
-
(2012)
Blood
, vol.120
, pp. 603-612
-
-
Shlush, L.I.1
-
36
-
-
0026819771
-
On the exact location of Steiner points in general dimension
-
Snyder, T.L. (1992) On the exact location of Steiner points in general dimension. SIAM J. Comput., 21, 163-180.
-
(1992)
SIAM J. Comput.
, vol.21
, pp. 163-180
-
-
Snyder, T.L.1
-
37
-
-
84862298995
-
Inference of tumor phylogenies from genomic assays on heterogeneous samples
-
Subramanian, A. et al. (2012) Inference of tumor phylogenies from genomic assays on heterogeneous samples. J. Biomed. Biotech., 2012, 797812.
-
(2012)
J. Biomed. Biotech.
, vol.2012
, pp. 797812
-
-
Subramanian, A.1
-
38
-
-
38449108764
-
Molecular mechanisms of erbB2-mediated breast cancer chemoresistance
-
Tan, M. and Yu, D. (2007) Molecular mechanisms of erbB2-mediated breast cancer chemoresistance. Adv. Exp. Med. Biol., 608, 119-129.
-
(2007)
Adv. Exp. Med. Biol.
, vol.608
, pp. 119-129
-
-
Tan, M.1
Yu, D.2
-
39
-
-
14844354380
-
Maximum likelihood estimation of oncogenetic tree models
-
von Heydebreck, A. et al. (2004)Maximum likelihood estimation of oncogenetic tree models. Biostatistics, 5, 545-556.
-
(2004)
Biostatistics
, vol.5
, pp. 545-556
-
-
Von Heydebreck, A.1
-
41
-
-
73549092920
-
FISH markers for detection of cervical lymph node metastases
-
Wangsa, D. et al. (2009) FISH markers for detection of cervical lymph node metastases. Am. J. Pathol., 175, 2637-2645.
-
(2009)
Am. J. Pathol.
, vol.175
, pp. 2637-2645
-
-
Wangsa, D.1
-
42
-
-
0033578853
-
Prox1 function is required for the development of the murine lymphatic system
-
Wigle, J.T. and Oliver, G. (1999) Prox1 function is required for the development of the murine lymphatic system. Cell, 98, 769-778.
-
(1999)
Cell
, vol.98
, pp. 769-778
-
-
Wigle, J.T.1
Oliver, G.2
-
43
-
-
79952770168
-
MYC and metastasis
-
Wolfer, A. and Ramaswamy, S. (2011) MYC and metastasis. Cancer Res., 71, 2034-2037.
-
(2011)
Cancer Res.
, vol.71
, pp. 2034-2037
-
-
Wolfer, A.1
Ramaswamy, S.2
-
44
-
-
84863230091
-
Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor
-
Xu, X. et al. (2012) Single-cell exome sequencing reveals single-nucleotide mutation characteristics of a kidney tumor. Cell, 148, 886-895.
-
(2012)
Cell
, vol.148
, pp. 886-895
-
-
Xu, X.1
|