A proteomics workflow for quantitative and time-resolved analysis of adaptation reactions of internalized bacteria

Methods

Volumn 61, Issue 3, 2013, Pages 244-250

  Pförtner, Henrike ^a   Wagner, Juliane ^a   Surmann, Kristin ^a   Hildebrandt, Petra ^a   Ernst, Sandra ^a   Bernhardt, Jörg ^a   Schurmann, Claudia ^a   Gutjahr, Melanie ^a   Depke, Maren ^a   Jehmlich, Ulrike ^a   Dhople, Vishnu ^a   Hammer, Elke ^a   Steil, Leif ^a   Völker, Uwe ^a   Schmidt, Frank ^a  

^a UNIVERSITY OF GREIFSWALD   (Germany)

Author keywords

Cell sorting; Host pathogen interaction; In vivo proteomics; Pulse chase labeling; S. aureus

Indexed keywords

CYTOPLASM PROTEIN; LYSOSTAPHIN; TRYPSIN;

ADAPTATION; ARTICLE; BACTERIAL CELL WALL; BACTERIUM; BACTERIUM ISOLATION; CELL DISRUPTION; CELL SELECTION; ENDOPLASMIC RETICULUM; EPITHELIUM CELL; FILTRATION; HOST CELL; HUMAN; HUMAN CELL; INTERNALIZATION; MASS SPECTROMETRY; PATHOGENESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN DEGRADATION; PROTEIN TRANSPORT; PROTEOMICS; PURIFICATION; QUANTITATIVE ANALYSIS; STAPHYLOCOCCUS AUREUS;

ADAPTATION, PHYSIOLOGICAL; ARGININE; BACTERIAL PROTEINS; BRONCHI; CARBON ISOTOPES; CELL LINE; EPITHELIAL CELLS; HOST-PATHOGEN INTERACTIONS; HUMANS; ISOTOPE LABELING; LYSINE; MASS SPECTROMETRY; PEPTIDES; PROTEOMICS; STAPHYLOCOCCUS AUREUS; TIME FACTORS;

BACTERIA (MICROORGANISMS); STAPHYLOCOCCUS AUREUS;

EID: 84879589516     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2013.04.009     Document Type: Article

References (23)

1. Lee J.G., Yates J.T. J. Am. Chem. Soc. 2004, 126(40):13071-13078.
2. Yates J.R., Ruse C.I., Nakorchevsky A. Annu. Rev. Biomed. Eng. 2009, 11:49-79.
3. Boyce J.D., et al. Proteomics 2006, 6(3):870-880.
4. Lee J., Deininger R.A. Luminescence 2004, 19(1):31-36.
5. Schmidt F., et al. Proteomics 2010.
6. Pohl K., et al. J. Bacteriol. 2009, 191(9):2953-2963.
7. Nieto C., Espinosa M. Plasmid 2003, 49(3):281-285.
8. Paape D., et al. Mol. Cell. Proteomics 2008, 7(9):1688-1701.
9. Wiacek C., Muller S., Benndorf D. Proteomics 2006, 6(22):5983-5994.
10. Jehmlich N., et al. Appl. Microbiol. Biotechnol. 2010, 88(2):575-584.
11. Schmidt F., Volker U. Proteomics 2011, 11(15):3203-3211.
12. Flotte T.R., et al. Proc. Natl. Acad. Sci. USA 1993, 90(22):10613-10617.
13. Deutsch E.W., et al. Proteomics 2010, 10(6):1150-1159.
14. Keller A., et al. Anal. Chem. 2002, 74(20):5383-5392.
15. Schleif R. J. Mol. Biol. 1967, 27(1):41-55.
16. Bernhardt J., et al. Genome Res. 2003, 13(2):224-237.
17. Otto A., et al. Nat. Commun. 2010, 1:137.
18. Wu J.A., et al. Antimicrob. Agents Chemother. 2003, 47(11):3407-3414.
19. Kumar J.K. Appl. Microbiol. Biotechnol. 2008, 80(4):555-561.
20. Sugai M., et al. J. Bacteriol. 1997, 179(4):1193-1202.
21. Jehmlich N., et al. Proteomics 2012, 12(1):37-42.
22. Herbst F.A., et al. Mol. Cell. Proteomics 2013, in press, Available online: 19 April, 2013.
23. Taubert M., et al. Proteomics 2011, 11(11):2265-2274.