-
1
-
-
77649305354
-
Natural products version 2.0: connecting genes to molecules
-
Walsh CT, Fischbach MA. Natural products version 2.0: connecting genes to molecules. J Am Chem Soc 2010;132:2469-2493.
-
(2010)
J Am Chem Soc
, vol.132
, pp. 2469-2493
-
-
Walsh, C.T.1
Fischbach, M.A.2
-
2
-
-
0027998112
-
Pathways and mechanisms in the biogenesis of novel deoxysugars by bacteria
-
Liu HW, Thorson JS. Pathways and mechanisms in the biogenesis of novel deoxysugars by bacteria. Annu Rev Microbiol 1994;48:223-256.
-
(1994)
Annu Rev Microbiol
, vol.48
, pp. 223-256
-
-
Liu, H.W.1
Thorson, J.S.2
-
3
-
-
0031127564
-
The role of carbohydrates in biologically active natural products
-
Weymouth-Wilson AC. The role of carbohydrates in biologically active natural products. Nat Prod Rep 1997;14:99-110.
-
(1997)
Nat Prod Rep
, vol.14
, pp. 99-110
-
-
Weymouth-Wilson, A.C.1
-
4
-
-
0026588580
-
A new tetracycline antibiotic with antitumor activity. II. The structural elucidation of SF2575
-
Hatsu M, Sasaki T, Gomi S, Kodama Y, Sezaki M, Inouye S, Kondo S. A new tetracycline antibiotic with antitumor activity. II. The structural elucidation of SF2575. J Antibiot (Tokyo) 1992;45:325-330.
-
(1992)
J Antibiot (Tokyo)
, vol.45
, pp. 325-330
-
-
Hatsu, M.1
Sasaki, T.2
Gomi, S.3
Kodama, Y.4
Sezaki, M.5
Inouye, S.6
Kondo, S.7
-
5
-
-
0026553877
-
A new tetracycline antibiotic with antitumor activity. I. Taxonomy and fermentation of the producing strain, isolation and characterization of SF2575
-
Hatsu M, Sasaki T, Watabe H, Miyadoh S, Nagasawa M, Shomura T, Sezaki M, Inouye S, Kondo S. A new tetracycline antibiotic with antitumor activity. I. Taxonomy and fermentation of the producing strain, isolation and characterization of SF2575. J Antibiot (Tokyo) 1992;45:320-324.
-
(1992)
J Antibiot (Tokyo)
, vol.45
, pp. 320-324
-
-
Hatsu, M.1
Sasaki, T.2
Watabe, H.3
Miyadoh, S.4
Nagasawa, M.5
Shomura, T.6
Sezaki, M.7
Inouye, S.8
Kondo, S.9
-
6
-
-
72249105298
-
Biochemical analysis of the biosynthetic pathway of an anticancer tetracycline SF2575
-
Pickens LB, Kim W, Wang P, Zhou H, Watanabe K, Gomi S, Tang Y. Biochemical analysis of the biosynthetic pathway of an anticancer tetracycline SF2575. J Am Chem Soc 2009;131:17677-17689.
-
(2009)
J Am Chem Soc
, vol.131
, pp. 17677-17689
-
-
Pickens, L.B.1
Kim, W.2
Wang, P.3
Zhou, H.4
Watanabe, K.5
Gomi, S.6
Tang, Y.7
-
7
-
-
60849089895
-
Decoding and engineering tetracycline biosynthesis
-
Pickens LB, Tang Y. Decoding and engineering tetracycline biosynthesis. Metab Eng 2009;11:69-75.
-
(2009)
Metab Eng
, vol.11
, pp. 69-75
-
-
Pickens, L.B.1
Tang, Y.2
-
8
-
-
79961084082
-
Genetic characterization of enzymes involved in the priming steps of oxytetracycline biosynthesis in Streptomyces rimosus
-
Wang P, Gao X, Chooi YH, Deng Z, Tang Y. Genetic characterization of enzymes involved in the priming steps of oxytetracycline biosynthesis in Streptomyces rimosus. Microbiology 2011;157(Part 8):2401-2409.
-
(2011)
Microbiology
, vol.157
, Issue.PART 8
, pp. 2401-2409
-
-
Wang, P.1
Gao, X.2
Chooi, Y.H.3
Deng, Z.4
Tang, Y.5
-
9
-
-
3343016696
-
The hedamycin locus implicates a novel aromatic PKS priming mechanism
-
Bililign T, Hyun CG, Williams JS, Czisny AM, Thorson JS. The hedamycin locus implicates a novel aromatic PKS priming mechanism. Chem Biol 2004;11:959-969.
-
(2004)
Chem Biol
, vol.11
, pp. 959-969
-
-
Bililign, T.1
Hyun, C.G.2
Williams, J.S.3
Czisny, A.M.4
Thorson, J.S.5
-
10
-
-
0037466315
-
An evolving hierarchical family classification for glycosyltransferases
-
Coutinho PM, Deleury E, Davies GJ, Henrissat B. An evolving hierarchical family classification for glycosyltransferases. J Mol Biol 2003;328:307-317.
-
(2003)
J Mol Biol
, vol.328
, pp. 307-317
-
-
Coutinho, P.M.1
Deleury, E.2
Davies, G.J.3
Henrissat, B.4
-
11
-
-
62549106593
-
Glycosidases: a key to tailored carbohydrates
-
Bojarová P, Kren V. Glycosidases: a key to tailored carbohydrates. Trends Biotechnol 2009;27:199-209.
-
(2009)
Trends Biotechnol
, vol.27
, pp. 199-209
-
-
Bojarová, P.1
Kren, V.2
-
12
-
-
49449087287
-
Glycosyltransferases: structures, functions, and mechanisms
-
Lairson LL, Henrissat B, Davies GJ, Withers SG. Glycosyltransferases: structures, functions, and mechanisms. Annu Rev Biochem 2008;77:521-555.
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 521-555
-
-
Lairson, L.L.1
Henrissat, B.2
Davies, G.J.3
Withers, S.G.4
-
13
-
-
79953328716
-
Glycosyltransferases as biocatalysts
-
Palcic MM. Glycosyltransferases as biocatalysts. Curr Opin Chem Biol 2011;15:226-233.
-
(2011)
Curr Opin Chem Biol
, vol.15
, pp. 226-233
-
-
Palcic, M.M.1
-
14
-
-
79955444445
-
Rational design of an aryl-C-glycoside catalyst from a natural product O-glycosyltransferase
-
Härle J, Günther S, Lauinger B, Weber M, Kammerer B, Zechel DL, Luzhetskyy A, Bechthold A. Rational design of an aryl-C-glycoside catalyst from a natural product O-glycosyltransferase. Chem Biol 2011;18:520-530.
-
(2011)
Chem Biol
, vol.18
, pp. 520-530
-
-
Härle, J.1
Günther, S.2
Lauinger, B.3
Weber, M.4
Kammerer, B.5
Zechel, D.L.6
Luzhetskyy, A.7
Bechthold, A.8
-
15
-
-
4544291468
-
The glycosyltransferase UrdGT2 catalyzes both C- and O-glycosidic sugar transfers
-
Dürr C, Hoffmeister D, Wohlert SE, Ichinose K, Weber M, Von Mulert U, Thorson JS, Bechthold A. The glycosyltransferase UrdGT2 catalyzes both C- and O-glycosidic sugar transfers. Angew Chem Int Ed Engl 2004;43:2962-2965.
-
(2004)
Angew Chem Int Ed Engl
, vol.43
, pp. 2962-2965
-
-
Dürr, C.1
Hoffmeister, D.2
Wohlert, S.E.3
Ichinose, K.4
Weber, M.5
Von Mulert, U.6
Thorson, J.S.7
Bechthold, A.8
-
16
-
-
29444458427
-
Recent advances in aryl C-glycoside synthesis
-
Lee DY, He M. Recent advances in aryl C-glycoside synthesis. Curr Top Med Chem 2005;5:1333-1350.
-
(2005)
Curr Top Med Chem
, vol.5
, pp. 1333-1350
-
-
Lee, D.Y.1
He, M.2
-
17
-
-
29244446754
-
Structure, activity, synthesis and biosynthesis of aryl-C-glycosides
-
Bililign T, Griffith BR, Thorson JS. Structure, activity, synthesis and biosynthesis of aryl-C-glycosides. Nat Prod Rep 2005;22:742-760.
-
(2005)
Nat Prod Rep
, vol.22
, pp. 742-760
-
-
Bililign, T.1
Griffith, B.R.2
Thorson, J.S.3
-
18
-
-
84863135390
-
Structural studies of the spinosyn rhamnosyltransferase, SpnG
-
Isiorho EA, Liu HW, Keatinge-Clay AT. Structural studies of the spinosyn rhamnosyltransferase, SpnG. Biochemistry 2012;51:1213-1222.
-
(2012)
Biochemistry
, vol.51
, pp. 1213-1222
-
-
Isiorho, E.A.1
Liu, H.W.2
Keatinge-Clay, A.T.3
-
19
-
-
20044376278
-
Protocols for production of selenomethionine-labeled proteins in 2-L polyethylene terephthalate bottles using auto-induction medium
-
Sreenath HK, Bingman CA, Buchan BW, Seder KD, Burns BT, Geetha HV, Jeon WB, Vojtik FC, Aceti DJ, Frederick RO, Phillips GN Jr, Fox BG. Protocols for production of selenomethionine-labeled proteins in 2-L polyethylene terephthalate bottles using auto-induction medium. Protein Expr Purif 2005;40:256-267.
-
(2005)
Protein Expr Purif
, vol.40
, pp. 256-267
-
-
Sreenath, H.K.1
Bingman, C.A.2
Buchan, B.W.3
Seder, K.D.4
Burns, B.T.5
Geetha, H.V.6
Jeon, W.B.7
Vojtik, F.C.8
Aceti, D.J.9
Frederick, R.O.10
Phillips Jr., G.N.11
Fox, B.G.12
-
20
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z, Minor W. Processing of X-ray diffraction data collected in oscillation mode. Macromol Crystallography Part A 1997;276:307-326.
-
(1997)
Macromol Crystallography Part A
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
21
-
-
66249112826
-
Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard
-
Terwilliger TC, Adams PD, Read RJ, Mccoy AJ, Moriarty NW, Grosse-Kunstleve RW, Afonine PV, Zwart PH, Hung LW. Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard. Acta Crystallographica Section D-Biological Crystallography 2009;65:582-601.
-
(2009)
Acta Crystallographica Section D-Biological Crystallography
, vol.65
, pp. 582-601
-
-
Terwilliger, T.C.1
Adams, P.D.2
Read, R.J.3
Mccoy, A.J.4
Moriarty, N.W.5
Grosse-Kunstleve, R.W.6
Afonine, P.V.7
Zwart, P.H.8
Hung, L.W.9
-
22
-
-
13244281317
-
Coot: model-building tools for molecular graphics
-
Emsley P, Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 2004;60(Part 1):2126-2132.
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, Issue.PART 1
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
23
-
-
74549178560
-
MolProbity: all-atom structure validation for macromolecular crystallography
-
Chen VB, Arendall WB III, Headd JJ, Keedy DA, Immormino RM, Kapral GJ, Murray LW, Richardson JS, Richardson DC. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr D Biol Crystallogr 2010;66(Part 1):12-21.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, Issue.PART 1
, pp. 12-21
-
-
Chen, V.B.1
Arendall III, W.B.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
Kapral, G.J.6
Murray, L.W.7
Richardson, J.S.8
Richardson, D.C.9
-
24
-
-
33747593473
-
Use of PYMOL as a communications tool for molecular science
-
DeLano WL. Use of PYMOL as a communications tool for molecular science. Abstracts Papers Am Chem Soc 2004;228:U313-U314.
-
(2004)
Abstracts Papers Am Chem Soc
, vol.228
-
-
DeLano, W.L.1
-
25
-
-
70349932423
-
AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility
-
Morris GM, Huey R, Lindstrom W, Sanner MF, Belew RK, Goodsell DS, Olson AJ. AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility. J Comput Chem 2009;30:2785-2791.
-
(2009)
J Comput Chem
, vol.30
, pp. 2785-2791
-
-
Morris, G.M.1
Huey, R.2
Lindstrom, W.3
Sanner, M.F.4
Belew, R.K.5
Goodsell, D.S.6
Olson, A.J.7
-
26
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel E, Henrick K. Inference of macromolecular assemblies from crystalline state. J Mol Biol 2007;372:774-797.
-
(2007)
J Mol Biol
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
27
-
-
80055072048
-
Complete set of glycosyltransferase structures in the calicheamicin biosynthetic pathway reveals the origin of regiospecificity
-
Chang A, Singh S, Helmich KE, Goff RD, Bingman CA, Thorson JS, Phillips GN Jr. Complete set of glycosyltransferase structures in the calicheamicin biosynthetic pathway reveals the origin of regiospecificity. Proc Natl Acad Sci USA 2011;108:17649-17654.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 17649-17654
-
-
Chang, A.1
Singh, S.2
Helmich, K.E.3
Goff, R.D.4
Bingman, C.A.5
Thorson, J.S.6
Phillips Jr., G.N.7
-
28
-
-
34547651180
-
Structure and action of the C-C bond-forming glycosyltransferase UrdGT2 involved in the biosynthesis of the antibiotic urdamycin
-
Mittler M, Bechthold A, Schulz GE. Structure and action of the C-C bond-forming glycosyltransferase UrdGT2 involved in the biosynthesis of the antibiotic urdamycin. J Mol Biol 2007;372:67-76.
-
(2007)
J Mol Biol
, vol.372
, pp. 67-76
-
-
Mittler, M.1
Bechthold, A.2
Schulz, G.E.3
-
29
-
-
77954288774
-
Dali server: conservation mapping in 3D
-
Web Server issue
-
Holm L, Rosenström P. Dali server: conservation mapping in 3D. Nucleic Acids Res 2010;38(Web Server issue):W545-W549.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Holm, L.1
Rosenström, P.2
-
30
-
-
33645281589
-
Crystal structures of a multifunctional triterpene/flavonoid glycosyltransferase from Medicago truncatula
-
Shao H, He X, Achnine L, Blount JW, Dixon RA, Wang X. Crystal structures of a multifunctional triterpene/flavonoid glycosyltransferase from Medicago truncatula. Plant Cell 2005;17:3141-3154.
-
(2005)
Plant Cell
, vol.17
, pp. 3141-3154
-
-
Shao, H.1
He, X.2
Achnine, L.3
Blount, J.W.4
Dixon, R.A.5
Wang, X.6
-
31
-
-
2442440054
-
Crystal structure of vancosaminyltransferase GtfD from the vancomycin biosynthetic pathway: interactions with acceptor and nucleotide ligands
-
Mulichak AM, Lu W, Losey HC, Walsh CT, Garavito RM. Crystal structure of vancosaminyltransferase GtfD from the vancomycin biosynthetic pathway: interactions with acceptor and nucleotide ligands. Biochemistry 2004;43:5170-5180.
-
(2004)
Biochemistry
, vol.43
, pp. 5170-5180
-
-
Mulichak, A.M.1
Lu, W.2
Losey, H.C.3
Walsh, C.T.4
Garavito, R.M.5
-
32
-
-
14144253168
-
In vitro characterization of IroB, a pathogen-associated C-glycosyltransferase
-
Fischbach MA, Lin H, Liu DR, Walsh CT. In vitro characterization of IroB, a pathogen-associated C-glycosyltransferase. Proc Natl Acad Sci USA 2005;102:571-576.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 571-576
-
-
Fischbach, M.A.1
Lin, H.2
Liu, D.R.3
Walsh, C.T.4
-
33
-
-
84871023204
-
Switching between O- and C-Glycosyltransferase through Exchange of Active-Site Motifs
-
Gutmann A, Nidetzky B. Switching between O- and C-Glycosyltransferase through Exchange of Active-Site Motifs. Angew Chem Int Ed Engl 2012;51:12879-12883.
-
(2012)
Angew Chem Int Ed Engl
, vol.51
, pp. 12879-12883
-
-
Gutmann, A.1
Nidetzky, B.2
-
34
-
-
82355184499
-
Structural and biochemical characterization of the salicylyl-acyltranferase SsfX3 from a tetracycline biosynthetic pathway
-
Pickens LB, Sawaya MR, Rasool H, Pashkov I, Yeates TO, Tang Y. Structural and biochemical characterization of the salicylyl-acyltranferase SsfX3 from a tetracycline biosynthetic pathway. J Biol Chem 2011;286:41539-41551.
-
(2011)
J Biol Chem
, vol.286
, pp. 41539-41551
-
-
Pickens, L.B.1
Sawaya, M.R.2
Rasool, H.3
Pashkov, I.4
Yeates, T.O.5
Tang, Y.6
-
35
-
-
0036022960
-
Further development and validation of empirical scoring functions for structure-based binding affinity prediction
-
Wang R, Lai L, Wang S. Further development and validation of empirical scoring functions for structure-based binding affinity prediction. J Comput Aided Mol Des 2002;16:11-26.
-
(2002)
J Comput Aided Mol Des
, vol.16
, pp. 11-26
-
-
Wang, R.1
Lai, L.2
Wang, S.3
-
36
-
-
80054943835
-
DSX: a knowledge-based scoring function for the assessment of protein-ligand complexes
-
Neudert G, Klebe G. DSX: a knowledge-based scoring function for the assessment of protein-ligand complexes. J Chem Inf Model 2011;51:2731-2745.
-
(2011)
J Chem Inf Model
, vol.51
, pp. 2731-2745
-
-
Neudert, G.1
Klebe, G.2
-
37
-
-
84555220606
-
Statistical potential for modeling and ranking of protein-ligand interactions
-
Fan H, Schneidman-Duhovny D, Irwin JJ, Dong G, Shoichet BK, Sali A. Statistical potential for modeling and ranking of protein-ligand interactions. J Chem Inf Model 2011;51:3078-3092.
-
(2011)
J Chem Inf Model
, vol.51
, pp. 3078-3092
-
-
Fan, H.1
Schneidman-Duhovny, D.2
Irwin, J.J.3
Dong, G.4
Shoichet, B.K.5
Sali, A.6
|