Molecular epidemiology of human rabies viruses in Sri Lanka

Infection, Genetics and Evolution

Volumn 18, Issue , 2013, Pages 160-167

  Matsumoto, Takashi ^a   Ahmed, Kamruddin ^a,b   Karunanayake, Dushantha ^c   Wimalaratne, Omala ^c   Nanayakkara, Susilakanthi ^c   Perera, Devika ^c   Kobayashi, Yuji ^b   Nishizono, Akira ^a  

^a OITA UNIVERSITY   (Japan)

^b OITA UNIVERSITY   (Japan)

^c Medical Research Institute Colombo   (Sri Lanka)

Author keywords

Age distribution; G L noncoding region; Molecular epidemiology; Rabies virus; Sri Lanka

Indexed keywords

VIRUS ANTIGEN;

ADOLESCENT; ADULT; ARTICLE; CLADISTICS; DISEASE TRANSMISSION; DOG; G GENE; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; GEOGRAPHIC MAPPING; HUMAN; HUMAN TISSUE; MAJOR CLINICAL STUDY; MOLECULAR EPIDEMIOLOGY; MOLECULAR EVOLUTION; N GENE; NUCLEOTIDE SEQUENCE; PHYLOGENY; POPULATION MIGRATION; PRIORITY JOURNAL; PROMOTER REGION; RABIES; RABIES VIRUS; SRI LANKA; VIRUS GENE;

AGE DISTRIBUTION; G-L NONCODING REGION; MOLECULAR EPIDEMIOLOGY; RABIES VIRUS; SRI LANKA;

ADOLESCENT; ADULT; AGED; AGED, 80 AND OVER; CHILD; CHILD, PRESCHOOL; HUMANS; INFANT; MEMBRANE GLYCOPROTEINS; MIDDLE AGED; MOLECULAR EPIDEMIOLOGY; NUCLEOCAPSID PROTEINS; PHYLOGENY; RABIES; RABIES VIRUS; SRI LANKA; VIRAL ENVELOPE PROTEINS;

ANIMALIA; CANIS FAMILIARIS; RABIES VIRUS;

EID: 84879376945     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2013.05.018     Document Type: Article

References (32)

1. Ahmed K., Wimalaratne O., Dahal N., Khawplod P., Nanayakkara S., Rinzin K., Perera D., Karunanayake D., Matsumoto T., Nishizono A. Evaluation of a monoclonal antibody-based rapid immunochromatographic test for direct detection of rabies virus in the brain of humans and animals. Am. J. Trop. Med. Hyg. 2012, 86:736-740.
2. Albertini A.A., Schoehn G., Weissenhorn W., Ruigrok R.W. Structural aspects of rabies virus replication. Cell Mol. Life Sci. 2008, 65:282-294.
3. Arai Y.T., Takahashi H., Kameoka Y., Shiino T., Wimalaratne O., Lodmell D.L. Characterization of Sri Lanka rabies virus isolates using nucleotide sequence analysis of nucleoprotein gene. Acta Virol. 2001, 45:327-333.
4. Bourhy H., Reynes J.M., Dunham E.J., Dacheux L., Larrous F., Huong V.T., Xu G., Yan J., Miranda M.E., Holmes E.C. The origin and phylogeography of dog rabies virus. J. Gen. Virol. 2008, 89:2673-2681.
5. Chadha M.S., Arankalle V.A., Jadi R.S., Joshi M.V., Thakare J.P., Mahadev P.V., Mishra A.C. An outbreak of Chandipura virus encephalitis in the eastern districts of Gujarat state, India. Am. J. Trop. Med. Hyg. 2005, 73:566-570.
6. Davis P.L., Rambaut A., Bourhy H., Holmes E.C. The evolutionary dynamics of canid and mongoose rabies virus in Southern Africa. Arch. Virol. 2007, 152:1251-1258.
7. Dietzschold B., Schnell M., Koprowski H. Pathogenesis of rabies. Curr. Top. Microbiol. Immunol. 2005, 292:45-56.
8. Dodet B., Goswami A., Gunasekera A., de Guzman F., Jamali S., Montalban C., Purba W., Quiambao B., Salahuddin N., Sampath G., Tang Q., Tantawichien T., Wimalaratne O., Ziauddin A. Rabies awareness in eight Asian countries. Vaccine 2008, 26:6344-6348.
9. Jackson A.C. Current and future approaches to the therapy of human rabies. Antiviral Res. 2013, http://dx.doi.org/10.1016/j.antiviral.2013.01.003.
10. Jamil K.M., Ahmed K., Hossain M., Matsumoto T., Ali M.A., Hossain S., Islam A., Nasiruddin M., Nishizono A. Arctic-like rabies virus, Bangladesh. Emerg. Infect. Dis. 2012, 18:2021-2024.
11. Knobel D.L., Cleaveland S., Coleman P.G., Fèvre E.M., Meltzer M.I., Miranda M.E., Shaw A., Zinsstag J., Meslin F.X. Re-evaluating the burden of rabies in Africa and Asia. Bull. World Health Organ 2005, 83:360-368.
12. Kumarapeli V., Awerbuch-Friedlander T. Human rabies focusing on dog ecology-A challenge to public health in Sri Lanka. Acta Trop. 2009, 112:33-37.
13. Lakhanpal U., Sharma R.C. An epidemiological study of 177 cases of human rabies. Int. J. Epidemiol. 1985, 14:614-617.
14. Larkin M.A., Blackshields G., Brown N.P., Chenna R., McGettigan P.A., McWilliam H., Valentin F., Wallace I.M., Wilm A., Lopez R., Thompson J.D., Gibson T.J., Higgins D.G. Clustal W and Clustal X version 2.0. Bioinformatics 2007, 23:2947-2948.
15. Matsumoto T., Ahmed K., Wimalaratne O., Nanayakkara S., Perera D., Karunanayake D., Nishizono A. Novel sylvatic rabies virus variant in endangered golden palm civet, Sri Lanka. Emerg. Infect. Dis. 2011, 17:2346-2349.
16. Matsumoto T., Ahmed K., Wimalaratne O., Yamada K., Nanayakkara S., Perera D., Karunanayake D., Nishizono A. Whole-genome analysis of a human rabies virus from Sri Lanka. Arch. Virol. 2011, 156:659-669.
17. Meslin F.X., Kaplan M.M., Koprowski H. Laboratory Techniques in Rabies 1996, World Health Organization, World Health Organization, Geneva. 4th ed.
18. Mitui M.T., Shahnawaz Bin Tabib S.M., Matsumoto T., Khanam W., Ahmed S., Mori D., Akhter N., Yamada K., Kabir L., Nishizono A., Söderlund-Venermo M., Ahmed K. Detection of human bocavirus in the cerebrospinal fluid of children with encephalitis. Clin. Infect. Dis. 2012, 54:964-967.
19. Nadin-Davis S.A., Casey G.A., Wandeler A.I. A molecular epidemiological study of rabies virus in central Ontario and western Quebec. J. Gen. Virol. 1994, 75:2575-2583.
20. Nadin-Davis S.A., Turner G., Paul J.P., Madhusudana S.N., Wandeler A.I. Emergence of Arctic-like rabies lineage in India. Emerg. Infect. Dis. 2007, 13:111-116.
21. Nanayakkara S., Smith J.S., Rupprecht C.E. Rabies in Sri Lanka: splendid isolation. Emerg. Infect. Dis. 2003, 9:368-371.
22. Nel L.H., Sabeta C.T., von Teichman B., Jaftha J.B., Rupprecht C.E., Bingham J. Mongoose rabies in southern Africa: a re-evaluation based on molecular epidemiology. Virus Res. 2005, 109:165-173.
23. Parviz S., Chotani R., McCormick J., Fisher-Hoch S., Luby S. Rabies deaths in Pakistan: results of ineffective post-exposure treatment. Int. J. Infect. Dis. 2004, 8:346-352.
24. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
25. Tenzin, Dhand N.K., Gyeltshen T., Firestone S., Zangmo C., Dema C., Gyeltshen R., Ward M.P. Dog bites in humans and estimating human rabies mortality in rabies endemic areas of Bhutan. PLoS Negl. Trop. Dis. 2011, 5:e1391.
26. Vázquez-Morón S., Avellón A., Echevarría J.E. RT-PCR for detection of all seven genotypes of Lyssavirus genus. J. Virol. Methods 2006, 135:281-287.
27. von Teichman B.F., Thomson G.R., Meredith C.D., Nel L.H. Molecular epidemiology of rabies virus in South Africa: evidence for two distinct virus groups. J. Gen. Virol. 1995, 76:73-82.
28. Wilde H., Hemachudha T., Jackson A.C. Viewpoint: management of human rabies. Trans. R. Soc. Trop. Med. Hyg. 2008, 102:979-982.
29. Windiyaningsih C., Wilde H., Meslin F.X., Suroso T., Widarso H.S. The rabies epidemic on Flores Island, Indonesia (1998-2003). J. Med. Assoc. Thai. 2004, 87:1389-1393.
30. Yamagata J., Ahmed K., Khawplod P., Mannen K., Xuyen D.K., Loi H.H., Dung N.V., Nishizono A. Molecular epidemiology of rabies in Vietnam. Microbiol. Immunol. 2007, 51:833-840.
31. Yin C.P., Zhou H., Wu H., Tao X.Y., Rayner S., Wang S.M., Tang Q., Liang G.D. Analysis on factors related to rabies epidemic in China from 2007-2011. Virol. Sin. 2012, 27:132-143.
32. Zulu G.C., Sabeta C.T., Nel L.H. Molecular epidemiology of rabies: focus on domestic dogs (Canis familiaris) and black-backed jackals (Canis mesomelas) from northern South Africa. Virus Res. 2009, 140:71-78.