RT-PCR for detection of all seven genotypes of Lyssavirus genus

Journal of Virological Methods

Volumn 135, Issue 2, 2006, Pages 281-287

  Vazquez Moron S ^a   Avellon A ^a   Echevarria J E ^a  

^a INSTITUTO DE SALUD CARLOS III   (Spain)

Author keywords

Bat; Diagnosis; Lyssavirus; RT PCR; Surveillance

Indexed keywords

VIRUS RNA;

ACCURACY; ANIMAL TISSUE; ARTICLE; AUSTRALIAN BAT LYSSAVIRUS; BAT; CONTROLLED STUDY; CORRELATION ANALYSIS; DILUTION; DOG; DUVENHAGE VIRUS; EUROPEAN BAT LYSSAVIRUS 1A; EUROPEAN BAT LYSSAVIRUS 1B; EUROPEAN BAT LYSSAVIRUS 2A; EUROPEAN BAT LYSSAVIRUS 2B; GENE AMPLIFICATION; GENE IDENTIFICATION; GENE SEQUENCE; GENETIC CONSERVATION; GENOTYPE; GEOGRAPHIC DISTRIBUTION; HORSE; IMMUNOFLUORESCENCE TEST; LAGOS BAT LYSSAVIRUS; MOKOLA VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RABIES; RABIES VIRUS; RABIES VIRUS 1; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA EXTRACTION; RNA VIRUS; SEQUENCE ANALYSIS; VIRUS DETECTION; VIRUS GENE; VIRUS GENOME;

ANIMALS; CHIROPTERA; DOGS; FLUORESCENT ANTIBODY TECHNIQUE; GENOTYPE; HORSES; LYSSAVIRUS; RABIES; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, VIRAL;

CANIS FAMILIARIS; EQUUS CABALLUS; LYSSAVIRUS; MAMMALIA; WEST CAUCASIAN BAT VIRUS;

EID: 33745284943     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2006.03.008     Document Type: Article

References (27)

1. Arai Y.T., Kuzmin I.V., Kameoka Y., and Botvinkin A.D. New lyssavirus genotype from the lesser mouse-eared bat (Myotis blythi), Kyrghyzstan. Emerg. Infect. Dis. 9 3 (2003) 333-337
2. Arguin P.M., Murray-Lillibridge K., Miranda M.E., Smith J.S., Calaor A.B., and Rupprecht C.E. Serologic evidence of Lyssavirus infections among bats, the Philippines. Emerg. Infect. Dis. 8 3 (2002) 258-262
3. Aubert, M., 1999. Rabies Bulletin Europe, vol. 23, no. 2, Quarter 2.
4. Black E.M., Lowings J.P., Smith J., Heaton P.R., and McElhinney L.M. A rapid RT-PCR method to differentiate six established genotypes of rabies and rabies-related viruses using TaqMan technology. J. Virol. Methods 105 1 (2002) 25-35
5. Black E.M., McElhinney L.M., Lowings J.P., Smith J., Johnstone P., and Heaton P.R. Molecular methods to distinguish between classical rabies and the rabies-related European bat lyssaviruses. J. Virol. Methods 87 1-2 (2000) 123-131
6. Botvinkin A.D., Poleschuk E.M., Kuzmin I.V., Borisova T.I., Gazaryan S.V., Yager P., and Rupprecht C.E. Novel lyssaviruses isolated from bats in Russia. Emerg. Infect. Dis. 9 12 (2003) 1623-1625
7. Casas I., Powell L., Klapper P.E., and Cleator G.M. New method for the extraction of viral RNA and DNA from cerebrospinal fluid for use in the polymerase chain reaction assay. J. Virol. Methods 53 1 (1995) 25-36
8. Constantine D.G. Geographic translocation of bats: known and potential problems. Emerg. Infect. Dis. 9 1 (2003) 17-21
9. Echevarría J.E., Avellon A., Juste J., Vera M., and Ibanez C. Screening of active lyssavirus infection in wild bat populations by viral RNA detection on oropharyngeal swabs. J. Clin. Microbiol. 39 10 (2001) 3678-3683
10. Fraser G.C., Hooper P.T., Lunt R.A., Gould A.R., Gleeson L.J., Hyatt A.D., Russell G.M., and Kattenbelt J.A. Encephalitis caused by a Lyssavirus in fruit bats in Australia. Emerg. Infect. Dis. 2 4 (1996) 327-331
11. Hanlon C.A., Kuzmin I.V., Blanton J.D., Weldon W.C., Manangan J.S., and Rupprecht C.E. Efficacy of rabies biologics against new lyssaviruses from Eurasia. Virus Res. 111 1 (2005) 44-54
12. Heaton P.R., Johnstone P., McElhinney L.M., Cowley R., O'Sullivan E., and Whitby J.E. Heminested PCR assay for detection of six genotypes of rabies and rabies-related viruses. J. Clin. Microbiol. 35 11 (1997) 2762-2766
13. Heaton P.R., McElhinney L.M., and Lowings J.P. Detection and identification of rabies and rabies-related viruses using rapid-cycle PCR. J. Virol. Methods 81 1-2 (1999) 63-69
14. Johnson N., Lipscomb D.W., Stott R., Gopal Rao G., Mansfield K., Smith J., McElhinney L., and Fooks A.R. Investigation of a human case of rabies in the United Kingdom. J. Clin. Virol. 25 3 (2002) 351-356
15. Kamolvarin N., Tirawatnpong T., Rattanasiwamoke R., Tirawatnpong S., Panpanich T., and Hemachudha T. Diagnosis of rabies by polymerase chain reaction with nested primers. J. Infect. Dis. 167 1 (1993) 207-210
16. Kuzmin I.V., Hughes G.J., Botvinkin A.D., Orciari L.A., and Rupprecht C.E. Phylogenetic relationships of Irkut and West Caucasian bat viruses within the Lyssavirus genus and suggested quantitative criteria based on the N gene sequence for lyssavirus genotype definition. Virus Res. 111 1 (2005) 28-43
17. Kuzmin I.V., Orciari L.A., Arai Y.T., Smith J.S., Hanlon C.A., Kameoka Y., and Rupprecht C.E. Bat lyssaviruses (Aravan and Khujand) from Central Asia: phylogenetic relationships according to N, P and G gene sequences. Virus Res. 97 2 (2003) 65-79
18. Lumlertdacha B., Boongird K., Wanghongsa S., Wacharapluesadee S., Chanhome L., Khawplod P., Hemachudha T., Kuzmin I., and Rupprecht C.E. Survey for bat lyssaviruses, Thailand. Emerg. Infect. Dis. 11 2 (2005) 232-236
19. Muller T., Cox J., Peter W., Schafer R., Johnson N., McElhinney L.M., Geue J.L., Tjornehoj K., and Fooks A.R. Spill-over of European bat lyssavirus type 1 into a stone marten (Martes foina) in Germany. J. Vet. Med. B Infect. Dis. Vet. Public Health 51 2 (2004) 49-54
20. Nadin-Davis S.A. Polymerase chain reaction protocols for rabies virus discrimination. J. Virol. Methods 75 1 (1998) 1-8
21. Picard-Meyer E., Bruyere V., Barrat J., Tissot E., Barrat M.J., and Cliquet F. Development of a hemi-nested RT-PCR method for the specific determination of European Bat Lyssavirus 1; comparison with other rabies diagnostic methods. Vaccine 22 15-16 (2004) 1921-1929
22. Ronsholt, L., 2002. Rabies Bulletin Europe, vol. 26, no. 2, Quarter 2.
23. Serra-Cobo J., Amengual B., Abellan C., and Bourhy H. European bat lyssavirus infection in Spanish bat populations. Emerg. Infect. Dis. 8 4 (2002) 413-420
24. Smith J., McElhinney L., Parsons G., Brink N., Doherty T., Agranoff D., Miranda M.E., and Fooks A.R. Case report: rapid ante-mortem diagnosis of a human case of rabies imported into the UK from the Philippines. J. Med. Virol. 69 1 (2003) 150-155
25. Smith J., McElhinney L.M., Heaton P.R., Black E.M., and Lowings J.P. Assessment of template quality by the incorporation of an internal control into a RT-PCR for the detection of rabies and rabies-related viruses. J. Virol. Methods 84 2 (2000) 107-115
26. Tierkel E.S., and Atanasiu P. Rapid microscopy examination for Negri bodies and preparation of specimens for biological tests. In: Koprowski H. (Ed). Laboratory Techniques in Rabies. 4th ed. (1996), World Health Organization, Geneva 55-65
27. Whitby J.E., Heaton P.R., Whitby H.E., O'Sullivan E., and Johnstone P. Rapid detection of rabies and rabies-related viruses by RT-PCR and enzyme-linked immunosorbent assay. J. Virol. Methods 69 1-2 (1997) 63-72