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Volumn 65, Issue 7, 2013, Pages 531-541

IgH loci of American alligator and saltwater crocodile shed light on IgA evolution

Author keywords

Antibody phylogeny; Evolution; Immunoglobulin genes; Reptilian immunity

Indexed keywords

IMMUNOGLOBULIN; IMMUNOGLOBULIN A; IMMUNOGLOBULIN D; IMMUNOGLOBULIN D2; IMMUNOGLOBULIN M; IMMUNOGLOBULIN X; IMMUNOGLOBULIN Y; UNCLASSIFIED DRUG;

EID: 84879287156     PISSN: 00937711     EISSN: 14321211     Source Type: Journal    
DOI: 10.1007/s00251-013-0692-y     Document Type: Article
Times cited : (35)

References (38)
  • 3
    • 63049137957 scopus 로고    scopus 로고
    • Structure and evolution of avian immunoglobulins
    • ISBN-10: 0123706343. Academic Press
    • Davison F, Margor KE, Kaspers B (2008) Structure and evolution of avian immunoglobulins. Avian immunology. ISBN-10: 0123706343. Academic Press: 107-128
    • (2008) Avian Immunology , pp. 107-128
    • Davison, F.1    Margor, K.E.2    Kaspers, B.3
  • 4
    • 84856549872 scopus 로고    scopus 로고
    • Oral immunization of the African clawed frog (Xenopus laevis) upregulates the mucosal immunoglobulin IgX
    • 22100190 10.1016/j.vetimm.2011.10.019 1:CAS:528:DC%2BC38XitVeqtr8%3D
    • Du CC, Mashoof SM, Criscitiello MF (2012) Oral immunization of the African clawed frog (Xenopus laevis) upregulates the mucosal immunoglobulin IgX. Vet Immunol Immunopathol 145(1-2):493-498
    • (2012) Vet Immunol Immunopathol , vol.145 , Issue.1-2 , pp. 493-498
    • Du, C.C.1    Mashoof, S.M.2    Criscitiello, M.F.3
  • 5
    • 70350536535 scopus 로고    scopus 로고
    • Was dinosaurian physiology inherited by birds? Reconciling slow growth in archaeopteryx
    • 19816582 10.1371/journal.pone.0007390
    • Erickson GM, Rauhut OWM, Zhou Z, Turner AH, Inouye BD, Hu D, Norell MA (2009) Was dinosaurian physiology inherited by birds? Reconciling slow growth in archaeopteryx. PLoS One 4(10):e7390
    • (2009) PLoS One , vol.4 , Issue.10 , pp. 7390
    • Erickson, G.M.1    Rauhut, O.W.M.2    Zhou, Z.3    Turner, A.H.4    Inouye, B.D.5    Hu, D.6    Norell, M.A.7
  • 6
    • 44749091844 scopus 로고    scopus 로고
    • IgD in the reptile leopard gecko
    • 18486212 10.1016/j.molimm.2008.02.027
    • Gambón-Deza F, Sanchez-Espinel C (2008) IgD in the reptile leopard gecko. Mol Immunol 45(12):3470-3476
    • (2008) Mol Immunol , vol.45 , Issue.12 , pp. 3470-3476
    • Gambón-Deza, F.1    Sanchez-Espinel, C.2
  • 7
    • 33846340756 scopus 로고    scopus 로고
    • A novel IgA-like immunoglobulin in the reptile Eublepharis macularius
    • 10.1016/j.dci.2006.09.005
    • Gambón-Deza F, Sanchez-Espinel C, Vieitez-Beneitez J (2007) A novel IgA-like immunoglobulin in the reptile Eublepharis macularius. Dev Comp Immunol 31(6):596-605
    • (2007) Dev Comp Immunol , vol.31 , Issue.6 , pp. 596-605
    • Gambón-Deza, F.1    Sanchez-Espinel, C.2    Vieitez-Beneitez, J.3
  • 8
    • 64549145398 scopus 로고    scopus 로고
    • The immunoglobulin heavy chain locus in the reptile Anolis carolinensis
    • 19299020 10.1016/j.molimm.2009.02.019
    • Gambón-Deza F, Sánchez-Espinel C, Magadán- Mompó S (2009a) The immunoglobulin heavy chain locus in the reptile Anolis carolinensis. Mol Immunol 46(8-9):1679-1687
    • (2009) Mol Immunol , vol.46 , Issue.8-9 , pp. 1679-1687
    • Gambón-Deza, F.1    Sánchez-Espinel, C.2    Magadán- Mompó, S.3
  • 9
    • 67650578605 scopus 로고    scopus 로고
    • The immunoglobulin heavy chain locus in the platypus (Ornithorhynchus anatinus)
    • 19505725 10.1016/j.molimm.2009.05.025
    • Gambón-Deza F, Sánchez-Espinel C, Magadán- Mompó S (2009b) The immunoglobulin heavy chain locus in the platypus (Ornithorhynchus anatinus). Mol Immunol 46(13):2515-2523
    • (2009) Mol Immunol , vol.46 , Issue.13 , pp. 2515-2523
    • Gambón-Deza, F.1    Sánchez-Espinel, C.2    Magadán- Mompó, S.3
  • 11
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
    • 20738864 10.1186/gb-2010-11-8-r86
    • Goecks J, Nekrutenko A, Taylor J (2010) Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol 11(8):R86
    • (2010) Genome Biol , vol.11 , Issue.8 , pp. 86
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3
  • 12
    • 74549125386 scopus 로고    scopus 로고
    • A multi-platform graphical user interface for sequence alignment and phylogenetic tree building
    • 19854763 10.1093/molbev/msp259 1:CAS:528:DC%2BC3cXntlGgtw%3D%3D
    • Gouy M, Guindon S, Gascuel O (2010) A multi-platform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 27(2):221-224
    • (2010) Mol Biol Evol , vol.27 , Issue.2 , pp. 221-224
    • Gouy, M.1    Guindon, S.2    Gascuel, O.3
  • 14
    • 77957944090 scopus 로고    scopus 로고
    • Genome evolution in Reptilia, the sister group of mammals
    • 10.1146/annurev-genom-082509-141646 1:CAS:528:DC%2BC3cXht12jt7vP
    • Janes D, Organ C, Fujita M, Shedlock A, Edwards S, Hum G (2010) Genome evolution in Reptilia, the sister group of mammals. Annu Rev Genomics 11:239-264
    • (2010) Annu Rev Genomics , vol.11 , pp. 239-264
    • Janes, D.1    Organ, C.2    Fujita, M.3    Shedlock, A.4    Edwards, S.5    Hum, G.6
  • 15
    • 84865022771 scopus 로고    scopus 로고
    • Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes
    • John J et al (2012) Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes. Genome Biol 13(1):415
    • (2012) Genome Biol , vol.13 , Issue.1 , pp. 415
    • John, J.1
  • 16
    • 0345293626 scopus 로고
    • Simultaneous expression of immunoglobulin mu and delta heavy chains by a cloned B-cell lymphoma: A single copy of the VH gene is shared by two adjacent CH genes
    • 6806821 10.1073/pnas.79.9.2996 1:CAS:528:DyaL38XitFGrsrY%3D
    • Knapp MR, Liu CP, Newell N, Ward RB, Tucker PW, Strober S, Blattner F (1982) Simultaneous expression of immunoglobulin mu and delta heavy chains by a cloned B-cell lymphoma: a single copy of the VH gene is shared by two adjacent CH genes. Proc Natl Acad Sci USA 79(9):2996-3000
    • (1982) Proc Natl Acad Sci USA , vol.79 , Issue.9 , pp. 2996-3000
    • Knapp, M.R.1    Liu, C.P.2    Newell, N.3    Ward, R.B.4    Tucker, P.W.5    Strober, S.6    Blattner, F.7
  • 17
    • 45949109669 scopus 로고    scopus 로고
    • MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
    • 18417537 10.1093/bib/bbn017 1:CAS:528:DC%2BD1cXpt1artrg%3D
    • Kumar S, Nei M, Dudley J, Tamura K (2008) MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform 9(4):299-306
    • (2008) Brief Bioinform , vol.9 , Issue.4 , pp. 299-306
    • Kumar, S.1    Nei, M.2    Dudley, J.3    Tamura, K.4
  • 18
    • 84867298576 scopus 로고    scopus 로고
    • Extensive diversification of IgD-, IgY-, and truncated IgY({Delta}Fc)-encoding genes in the red-eared turtle (Trachemys scripta elegans)
    • 22972932 10.4049/jimmunol.1200188 1:CAS:528:DC%2BC38XhsVKrtL%2FN
    • Li L, Wang T, Sun Y, Cheng G, Yang H, Wei Z, Wang P, Hu X, Ren L, Meng Q, Zhang R, Guo Y, Hammarström L, Li N, Zhao Y (2012) Extensive diversification of IgD-, IgY-, and truncated IgY({Delta}Fc)-encoding genes in the red-eared turtle (Trachemys scripta elegans). J Immunol 189(8):3995-4004
    • (2012) J Immunol , vol.189 , Issue.8 , pp. 3995-4004
    • Li, L.1    Wang, T.2    Sun, Y.3    Cheng, G.4    Yang, H.5    Wei, Z.6    Wang, P.7    Hu, X.8    Ren, L.9    Meng, Q.10    Zhang, R.11    Guo, Y.12    Hammarström, L.13    Li, N.14    Zhao, Y.15
  • 19
    • 0035861650 scopus 로고    scopus 로고
    • The immunoglobulin heavy chain locus of the duck. Genomic organization and expression of D, J, and C region genes
    • 11592961 10.1074/jbc.M106221200 1:CAS:528:DC%2BD3MXpt1Gns7c%3D
    • Lundqvist ML, Middleton DL, Hazard S, Warr GW (2001) The immunoglobulin heavy chain locus of the duck. Genomic organization and expression of D, J, and C region genes. J Biol Chem 276(50):46729-46736
    • (2001) J Biol Chem , vol.276 , Issue.50 , pp. 46729-46736
    • Lundqvist, M.L.1    Middleton, D.L.2    Hazard, S.3    Warr, G.W.4
  • 20
    • 26044481167 scopus 로고    scopus 로고
    • Immunoglobulins of the non-galliform birds: Antibody expression and repertoire in the duck
    • 16150486 10.1016/j.dci.2005.06.019 1:CAS:528:DC%2BD2MXhtVKisL%2FI
    • Lundqvist M, Radford C, Warr G, Magor K (2006) Immunoglobulins of the non-galliform birds: antibody expression and repertoire in the duck. Dev Comp Immunol 30(1-2):93-100
    • (2006) Dev Comp Immunol , vol.30 , Issue.1-2 , pp. 93-100
    • Lundqvist, M.1    Radford, C.2    Warr, G.3    Magor, K.4
  • 23
    • 9644265544 scopus 로고    scopus 로고
    • The phylogenetic definition of Reptilia
    • 15545258 10.1080/10635150490503026
    • Modesto S, Anderson J (2004) The phylogenetic definition of Reptilia. Syst Biol 53(5):815-821
    • (2004) Syst Biol , vol.53 , Issue.5 , pp. 815-821
    • Modesto, S.1    Anderson, J.2
  • 24
    • 0029847619 scopus 로고    scopus 로고
    • Is Xenopus IgX an analog of IgA?
    • 8977274 10.1002/eji.1830261205 1:CAS:528:DyaK28XnsVGqsbY%3D
    • Mussmann R, Du Pasquier L, Hsu E (1996) Is Xenopus IgX an analog of IgA? Eur J Immunol 26(12):2823-2830
    • (1996) Eur J Immunol , vol.26 , Issue.12 , pp. 2823-2830
    • Mussmann, R.1    Du Pasquier, L.2    Hsu, E.3
  • 25
    • 27944477670 scopus 로고    scopus 로고
    • Concerted and birth-and-death evolution of multigene families
    • 16285855 10.1146/annurev.genet.39.073003.112240 1:CAS:528: DC%2BD28Xlt1Wktw%3D%3D
    • Nei M, Rooney A (2005) Concerted and birth-and-death evolution of multigene families. Annu Rev Genet 39:121-152
    • (2005) Annu Rev Genet , vol.39 , pp. 121-152
    • Nei, M.1    Rooney, A.2
  • 26
    • 33746167805 scopus 로고    scopus 로고
    • IgD, like IgM, is a primordial immunoglobulin class perpetuated in most jawed vertebrates
    • 10.1073/pnas.0601407103
    • Otha Y, Flajnik M (2006) IgD, like IgM, is a primordial immunoglobulin class perpetuated in most jawed vertebrates. Proc Natl Acad Sci USA 103(28):10723-10728
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.28 , pp. 10723-10728
    • Otha, Y.1    Flajnik, M.2
  • 27
    • 27844483477 scopus 로고    scopus 로고
    • Origin of flight: Could 'four-winged' dinosaurs fly?
    • 16292258 10.1038/nature04354 1:CAS:528:DC%2BD2MXht1WksbfK
    • Padian K, Dial KP (2005) Origin of flight: could 'four-winged' dinosaurs fly? Nature 438(7066):E3
    • (2005) Nature , vol.438 , Issue.7066 , pp. 3
    • Padian, K.1    Dial, K.P.2
  • 29
    • 33748653762 scopus 로고    scopus 로고
    • Automatic annotation of eukaryotic genes, pseudogenes and promoters
    • Solovyev V, Kosarev P, Seledsov I, Vorobyev D (2006) Automatic annotation of eukaryotic genes, pseudogenes and promoters. Genome Biol 7(Suppl1):10.1-12
    • (2006) Genome Biol , vol.7 , Issue.SUPPL. 1 , pp. 101-112
    • Solovyev, V.1    Kosarev, P.2    Seledsov, I.3    Vorobyev, D.4
  • 30
    • 3242889577 scopus 로고    scopus 로고
    • AUGUSTUS: A web server for gene finding in eukaryotes
    • 10.1093/nar/gkh379
    • Stanke M, Steinkamp R, Waack S, Morgenstern B (2004) AUGUSTUS: a web server for gene finding in eukaryotes. Nucleic Acids Res 32(Web Server issue):309-312
    • (2004) Nucleic Acids Res , vol.32 , Issue.WEB SERVER ISSUE , pp. 309-312
    • Stanke, M.1    Steinkamp, R.2    Waack, S.3    Morgenstern, B.4
  • 31
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • 21546353 10.1093/molbev/msr121 1:CAS:528:DC%2BC3MXht1eiu73K
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731-2739
    • (2011) Mol Biol Evol , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 32
    • 68349128512 scopus 로고    scopus 로고
    • On the genomics of immunoglobulins in the gray, short-tailed opossum Monodelphis domestica
    • 19609519 10.1007/s00251-009-0385-8 1:CAS:528:DC%2BD1MXpsVaqsbw%3D
    • Wang X, Olp JJ, Miller RD (2009) On the genomics of immunoglobulins in the gray, short-tailed opossum Monodelphis domestica. Immunogenetics 61(8):581-596
    • (2009) Immunogenetics , vol.61 , Issue.8 , pp. 581-596
    • Wang, X.1    Olp, J.J.2    Miller, R.D.3
  • 34
    • 0029155781 scopus 로고
    • IgY: Clues to the origins of modern antibodies
    • 10.1016/0167-5699(95)80008-5 1:CAS:528:DyaK2MXntleru7c%3D
    • Warr G, Magor K, Higgins D (1995) IgY: clues to the origins of modern antibodies. Trends Immunol 16(8):392-398
    • (1995) Trends Immunol , vol.16 , Issue.8 , pp. 392-398
    • Warr, G.1    Magor, K.2    Higgins, D.3
  • 35
    • 70349320143 scopus 로고    scopus 로고
    • Expression of IgM, IgD, and IgY in a reptile Anolis carolinensis
    • 19717516 10.4049/jimmunol.0803251 1:CAS:528:DC%2BD1MXhtVOmu77F
    • Wei Z, Wu Q, Ren L, Hu X, Guo Y, Warr GW, Hammarström L, Li N, Zhao Y (2009) Expression of IgM, IgD, and IgY in a reptile Anolis carolinensis. J Immunol 183(6):3858-3864
    • (2009) J Immunol , vol.183 , Issue.6 , pp. 3858-3864
    • Wei, Z.1    Wu, Q.2    Ren, L.3    Hu, X.4    Guo, Y.5    Warr, G.W.6    Hammarström, L.7    Li, N.8    Zhao, Y.9
  • 36
    • 65549097246 scopus 로고    scopus 로고
    • IgM, IgD and IgY and their expression pattern in the Chinese soft-shelled turtle Pelodiscus sinensis
    • 19414198 10.1016/j.molimm.2009.03.028 1:CAS:528:DC%2BD1MXlvFGisLY%3D
    • Xu Z, Wang GL, Nie P (2009) IgM, IgD and IgY and their expression pattern in the Chinese soft-shelled turtle Pelodiscus sinensis. Mol Immunol 46(10):2124-2132
    • (2009) Mol Immunol , vol.46 , Issue.10 , pp. 2124-2132
    • Xu, Z.1    Wang, G.L.2    Nie, P.3
  • 37
    • 0033653863 scopus 로고    scopus 로고
    • Mapping of the chicken immunoglobulin heavy-chain constant region gene locus reveals an inverted alpha gene upstream of a condensed upsilon gene
    • 11106938 10.1046/j.1365-2567.2000.00106.x 1:CAS:528:DC%2BD3cXoslWnu78%3D
    • Zhao Y, Rabbani H, Shimizu A, Hammarström L (2000) Mapping of the chicken immunoglobulin heavy-chain constant region gene locus reveals an inverted alpha gene upstream of a condensed upsilon gene. Immunology 101(3):348-353
    • (2000) Immunology , vol.101 , Issue.3 , pp. 348-353
    • Zhao, Y.1    Rabbani, H.2    Shimizu, A.3    Hammarström, L.4


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