Setaria genome sequencing: An overview

Journal of Plant Biochemistry and Biotechnology

Volumn 22, Issue 3, 2013, Pages 257-260

  Lata, Charu ^a,b   Prasad, Manoj ^a  

^a JAWAHARLAL NEHRU UNIVERSITY   (India)

^b NATIONAL RESEARCH CENTRE ON PLANT BIOTECHNOLOGY   (India)

Author keywords

Biofuel; Crop improvement; Marker aided breeding; Millets; Setaria; Single nucleotide polymorphism

Indexed keywords

ANIMALIA; PANICUM VIRGATUM; PENNISETUM PURPUREUM; POACEAE; SETARIA (PLANT); SETARIA ITALICA; SETARIA VIRIDIS;

EID: 84879207740     PISSN: 09717811     EISSN: 09741275     Source Type: Journal    
DOI: 10.1007/s13562-013-0216-8     Document Type: Note

References (9)

1. Bennetzen JL, Schmutz J, Wang H et al (2012) Reference genome sequence of the model plant Setaria. Nat Biotechnol 30: 555-561.
2. Chan C, Qi X, Li M-W, Wong F-L, Lam H-M (2012) Recent developments of genomic research in Soybean. J Genet Genomics 39: 317-324.
3. Gupta S, Kumari K, Das J, Lata C, Puranik S, Prasad M (2011) Development and utilization of novel intron length polymorphic markers in foxtail millet [Setaria italica (L.) P. Beauv.]. Genome 54: 586-602.
4. Gupta S, Kumari K, Sahu PP, Vidapu S, Prasad M (2012) Sequence based novel genomic microsatellite markers for robust genotyping purposes in foxtail millet [Setaria italica (L.) P. Beauv.]. Plant Cell Rep 31: 323-337.
5. Lata C, Sahu PP, Prasad M (2010) Comparative transcriptome analysis of differentially expressed genes in foxtail millet (Setaria italica L.) during dehydration stress. Biochem Biophys Res Commun 393: 720-727.
6. Lata C, Gupta S, Prasad M (2012) Foxtail millet: a model crop for genetic and genomic studies in bioenergy grasses. Crit Rev Biotechnol. doi: 10. 3109/07388551. 2012. 716809.
7. Pandey G, Misra G, Kumari K, Gupta S, Parida SK, Chattopadhyay D, Prasad M (2013) Genome-wide development and use of microsatellite markers for large-scale genotyping applications in foxtail millet [Setaria italica (L.)]. DNA Res. doi: 10. 1093/dnares/dst002.
8. Zhang J, Liu T, Fu J et al (2007) Construction and application of EST library from Setaria italica in response to dehydration stress. Genomics 90: 121-131.
9. Zhang G, Liu X, Quan Z et al (2012) Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential. Nat Biotechnol 30: 549-554.