메뉴 건너뛰기




Volumn 27, Issue 1, 2013, Pages 212-221

Dark inorganic carbon fixation sustains the functioning of benthic deep-sea ecosystems

Author keywords

carbon cycle; deep sea sediments; ecosystem functioning; microbial metabolism

Indexed keywords

AMINO ACIDS; ECOSYSTEMS; FLUORESCENCE MICROSCOPY; METABOLISM; PHYSIOLOGY;

EID: 84878899214     PISSN: 08866236     EISSN: 19449224     Source Type: Journal    
DOI: 10.1002/gbc.20030     Document Type: Article
Times cited : (61)

References (86)
  • 1
    • 57649114800 scopus 로고    scopus 로고
    • Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic
    • doi: 10.1038/nature07535
    • Agogué, H., M. Brink, J. Dinasquet, and, G. J. Herndl, (2008), Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic, Nature, 456, 788-791, doi: 10.1038/nature07535.
    • (2008) Nature , vol.456 , pp. 788-791
    • Agogué, H.1    Brink, M.2    Dinasquet, J.3    Herndl, G.J.4
  • 2
    • 78649449219 scopus 로고    scopus 로고
    • High bicarbonate assimilation in the dark by Artic bacteria
    • doi: 10.1038/ismej.2010.69
    • Alonso-Sáez, L., P. E. Galand, E. O. Casamayor, C. Pedrós-Alió, and, S. Bertilsson, (2010), High bicarbonate assimilation in the dark by Artic bacteria, ISME J., 4, 1581-1590, doi: 10.1038/ismej.2010.69.
    • (2010) ISME J. , vol.4 , pp. 1581-1590
    • Alonso-Sáez, L.1    Galand, P.E.2    Casamayor, E.O.3    Pedrós- Alió, C.4    Bertilsson, S.5
  • 3
    • 67949124536 scopus 로고    scopus 로고
    • Microbial oceanography of the dark ocean's pelagic realm
    • doi: 10.1029/2002JC001625
    • Arístegui, J., J. M. Gasol, C. M. Duarte, and, G. J. Herndl, (2009), Microbial oceanography of the dark ocean's pelagic realm, Limnol. Oceanogr., 54, 1501-1529, doi: 10.1029/2002JC001625.
    • (2009) Limnol. Oceanogr. , vol.54 , pp. 1501-1529
    • Arístegui, J.1    Gasol, J.M.2    Duarte, C.M.3    Herndl, G.J.4
  • 4
    • 0345863540 scopus 로고    scopus 로고
    • Metabolism of inorganic N compounds by ammonia-oxidizing bacteria
    • DOI 10.1080/10409230390267446
    • Arp, D. J., and, L. Y. Stein, (2003), Metabolism of inorganic N compounds by ammonia-oxidizing bacteria. Crit. Rev. Biochem. Mol., 38, 471-495, doi:10.1080%2f10409230390267446. (Pubitemid 38091406)
    • (2003) Critical Reviews in Biochemistry and Molecular Biology , vol.38 , Issue.6 , pp. 471-495
    • Arp, D.J.1    Stein, L.Y.2
  • 5
    • 0142156526 scopus 로고    scopus 로고
    • Iron and sulfide oxidation within the basaltic ocean crust: Implications for chemolithoautotrophic microbial biomass production
    • DOI 10.1016/S0016-7037(03)00304-1
    • Bach, W., and, K. J. Edwards, (2003), Iron and sulfide oxidation within the basaltic ocean crust: Implications for chemolithoautotrophic microbial biomass production, Geochim. Cosmochim. Acta, 67, 3871-3887, doi: 10.1016/S0016-7037(00)00304-1. (Pubitemid 37312329)
    • (2003) Geochimica et Cosmochimica Acta , vol.67 , Issue.20 , pp. 3871-3887
    • Bach, W.1    Edwards, K.J.2
  • 6
    • 77955621498 scopus 로고    scopus 로고
    • Prokaryotic carbon utilization in the dark ocean: Growth efficiency, leucine-to-carbon conversion factors, and their relation
    • doi: 10.3354/ame01422
    • Baltar, F., J. Arístegui, J. M. Gasol, and, G. J. Herndl, (2010), Prokaryotic carbon utilization in the dark ocean: growth efficiency, leucine-to-carbon conversion factors, and their relation, Aquat. Microb. Ecol., 60: 227-232, doi: 10.3354/ame01422.
    • (2010) Aquat. Microb. Ecol. , vol.60 , pp. 227-232
    • Baltar, F.1    Arístegui, J.2    Gasol, J.M.3    Herndl, G.J.4
  • 7
    • 0025347664 scopus 로고
    • The unique posttranslational modification leading to deoxyhypusine or hypusine is a general feature of the archaebacterial kingdom
    • Bartig, D., H. Schumann, and, F. Klink, (1990), The unique post-translational modification leading to deoxyhypusine or hypusine is a general feature of the archaebacterial kingdom, Syst. Appl. Microbiol., 13: 112-116, doi: 10.1016/S0723-2020(11)80156-6. (Pubitemid 20205338)
    • (1990) Systematic and Applied Microbiology , vol.13 , Issue.2 , pp. 112-116
    • Bartig, D.1    Schumann, H.2    Klink, F.3
  • 8
    • 20444375135 scopus 로고    scopus 로고
    • Carbon-based ocean productivity and phytoplankton physiology from space
    • DOI 10.1029/2004GB002299, GB1006
    • Behrenfeld, M. J., E. Boss, D. A. Siegel, and, D. M. Shea, (2005), Carbon-based ocean productivity and phytoplankton physiology from space, Global Biogeochem. Cycles, 19: GB1006, doi: 10.1029/2004GB002299. (Pubitemid 40801457)
    • (2005) Global Biogeochemical Cycles , vol.19 , Issue.1 , pp. 1-14
    • Behrenfeld, M.J.1    Boss, E.2    Siegel, D.A.3    Shea, D.M.4
  • 9
    • 0028163514 scopus 로고
    • Bacterial response to hydrostatic pressure in seawater samples collected in mixed-water and stratified-water condictions
    • doi: 10.3354/meps111137
    • Bianchi, A., and, J. Garcin, (1994), Bacterial response to hydrostatic pressure in seawater samples collected in mixed-water and stratified-water condictions, Mar. Ecol. Prog. Ser., 11: 137-141, doi: 10.3354/meps111137.
    • (1994) Mar. Ecol. Prog. Ser. , vol.11 , pp. 137-141
    • Bianchi, A.1    Garcin, J.2
  • 10
    • 1842861791 scopus 로고    scopus 로고
    • Horizontal gene transfer and archaeal origin of deoxyhypusine synthase homologous genes in bacteria
    • DOI 10.1016/j.gene.2004.01.018, PII S0378111904000526
    • Brochier, C., P. Lopez-Garcia, and, D. Moreira, (2004), Horizontal gene transfer and archaeal origin of deoxyhypusine synthase homologous genes in bacteria, Gene, 330: 169-176, doi: 10.1016/j.gene.2004.01.018. (Pubitemid 38490429)
    • (2004) Gene , vol.330 , Issue.1-2 , pp. 169-176
    • Brochier, C.E.1    Lopez-Garcia, P.2    Moreira, D.3
  • 11
    • 77952373121 scopus 로고    scopus 로고
    • Assessing the apparent imbalance between geochemical and biochemical indicators of meso- and bathypelagic biological activity: What is wrong with present calculations of carbon budgets?
    • doi: 10.1016/j.dsr2.2010.02.022
    • Burd, A. B., et al. (2010), Assessing the apparent imbalance between geochemical and biochemical indicators of meso- and bathypelagic biological activity: What is wrong with present calculations of carbon budgets?, Deep-Sea Res. II, 57: 1557-1571, doi: 10.1016/j.dsr2.2010.02.022.
    • (2010) Deep-Sea Res. II , vol.57 , pp. 1557-1571
    • Burd, A.B.1
  • 12
    • 33751118479 scopus 로고    scopus 로고
    • Flushing submarine canyons
    • DOI 10.1038/nature05271, PII NATURE05271
    • Canals, M., P. Puig, X. D. de Madron, S. Heussner, A. Palanques, and, J. Fabres, (2006), Flushing submarine canyons, Nature, 444: 354-357, doi: 10.1038/nature05271. (Pubitemid 44764108)
    • (2006) Nature , vol.444 , Issue.7117 , pp. 354-357
    • Canals, M.1    Puig, P.2    De Madron, X.D.3    Heussner, S.4    Palanques, A.5    Fabres, J.6
  • 13
    • 39449111060 scopus 로고    scopus 로고
    • 14C uptake in sublittoral sediments of the Gulf of Trieste (northern Adriatic Sea): Methodological aspects and data analyses
    • doi: 10.1016/j.ecss.2007.09.005
    • 14C uptake in sublittoral sediments of the Gulf of Trieste (northern Adriatic Sea): Methodological aspects and data analyses, Estuar. Coast. Shelf. Sci., 77: 50-62, doi: 10.1016/j.ecss.2007.09.005.
    • (2007) Estuar. Coast. Shelf. Sci. , vol.77 , pp. 50-62
    • Cibic, T.1    Blasutto, O.2    Burba, N.3    Fonda Umani, S.4
  • 14
    • 0031900613 scopus 로고    scopus 로고
    • Heterotrophic nanoflagellates, bacteria, and labile organic compounds in continental shelf and deep-sea sediments of the Eastern Mediterranean
    • DOI 10.1007/s002489900080
    • Danovaro, R., D. Marrale, N. Della Croce, A. Dell'Anno, and, M. Fabiano, (1998), Heterotrophic nanoflagellates, bacteria and labile organic compounds in continental shelf and deep-sea sediments of the Eastern Mediterranean, Microb. Ecol., 35: 244-255, 10.1007/s002489900080. (Pubitemid 28205621)
    • (1998) Microbial Ecology , vol.35 , Issue.3 , pp. 244-255
    • Danovaro, R.1    Marrale, D.2    Della Croce, N.3    Dell'Anno, A.4    Fabiano, M.5
  • 15
    • 0035959639 scopus 로고    scopus 로고
    • Bioavailability of organic matter in the sediments of the Porcupine Abyssal Plain, northeastern Atlantic
    • Danovaro, R., A. Dell'Anno, and, M. Fabiano, (2001), Bioavailability of organic matter in the sediments of the Porcupine Abyssal Plain, northeastern Atlantic, Mar. Ecol. Prog. Ser., 220: 25-32, doi: 10.3354/meps220025. (Pubitemid 33028042)
    • (2001) Marine Ecology Progress Series , vol.220 , pp. 25-32
    • Danovaro, R.1    Dell'Anno, A.2    Fabiano, M.3
  • 16
    • 0036194916 scopus 로고    scopus 로고
    • Higher abundance of bacteria than of viruses in deep Mediterranean sediments
    • DOI 10.1128/AEM.68.3.1468-1472.2002
    • Danovaro, R., E. Manini, and, A. Dell'Anno, (2002), Higher abundance of bacteria than of viruses in deep Mediterranean sediments, Appl. Environ. Microbiol., 68: 1468-1472, doi: 10.1128/AEM.68.3.1468-1472.2002. (Pubitemid 34205393)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.3 , pp. 1468-1472
    • Danovaro, R.1    Manini, E.2    Dell'Anno, A.3
  • 17
  • 18
    • 79952247827 scopus 로고    scopus 로고
    • Chemosynthetic activity prevails in deep-sea sediments of the Central Indian Basin
    • doi: 10.1007/s00792-010-0346-z
    • Das, A., P. P. Sujith, B. S. Mourya, S. U. Biche, and, P. A. LokaBharathi, (2011), Chemosynthetic activity prevails in deep-sea sediments of the Central Indian Basin, Extremophiles, 15: 177-189, doi: 10.1007/s00792-010- 0346-z.
    • (2011) Extremophiles , vol.15 , pp. 177-189
    • Das, A.1    Sujith, P.P.2    Mourya, B.S.3    Biche, S.U.4    Lokabharathi, P.A.5
  • 19
    • 25844519572 scopus 로고    scopus 로고
    • Ecology: Extracellular DNA plays a key role in deep-sea ecosystem functioning
    • DOI 10.1126/science.1117475
    • Dell'Anno, A., and, R. Danovaro, (2005), Extracellular DNA plays a key role in deep-sea ecosystem functioning, Science, 309: 2179, doi: 10.1126/science.1117475. (Pubitemid 41396060)
    • (2005) Science , vol.309 , Issue.5744 , pp. 2179
    • Dell'Anno, A.1    Danovaro, R.2
  • 20
    • 0035677972 scopus 로고    scopus 로고
    • 3H-thymidine incorporation: Ecological significance
    • DOI 10.1007/s00248-001-0022-z
    • Dixon, J. L., and, C. M. Turley, (2001), Measuring bacterial production in deep-sea sediments using 3H-thymidine incorporation: ecological significance, Microb. Ecol., 42: 549-561, doi: 10.1007/s00248-001-0022-z. (Pubitemid 34045796)
    • (2001) Microbial Ecology , vol.42 , Issue.4 , pp. 549-561
    • Dixon, J.L.1    Turley, C.M.2
  • 21
    • 0021709047 scopus 로고
    • 1-metabolism
    • Doronia, N. V., and, Y. A. Trotsenko, (1985), Levels of carbon dioxide assimilation in bacteria with different pathways of C1 metabolism, Microbiologiya, 53: 885-889. (Pubitemid 15154643)
    • (1984) Mikrobiologiya , vol.53 , Issue.6 , pp. 885-889
    • Doronina, N.V.1    Trotsenko, Y.A.2
  • 22
    • 40749091671 scopus 로고    scopus 로고
    • A synthesis of global particle export from the surface ocean and cycling through the ocean interior and on the seafloor
    • DOI 10.1029/2006GB002907
    • Dunne, J. P., J. L. Sarmiento, and, A. Gnanadesikan, (2007), A synthesis of global particle export from the surface ocean and cycling through the ocean interior and on the seafloor, Global Biogeochem. Cycles, 21, GB4006, doi: 10.1029/2006GB002907. (Pubitemid 351386628)
    • (2007) Global Biogeochemical Cycles , vol.21 , Issue.4
    • Dunne, J.P.1    Sarmiento, J.L.2    Gnanadesikan, A.3
  • 25
    • 34248178641 scopus 로고    scopus 로고
    • New processes and players in the nitrogen cycle: The microbial ecology of anaerobic and archaeal ammonia oxidation
    • DOI 10.1038/ismej.2007.8, PII ISMEJ20078
    • Francis, C. A., J. M. Beman, and, M. M. M. Kuypers, (2007), New processes and players in the nitrogen cycle: the microbial ecology of anaerobic and archaeal oxidation, ISME J., 1: 19-27, doi: 10.1038/ismej.2007.8. (Pubitemid 46717128)
    • (2007) ISME Journal , vol.1 , Issue.1 , pp. 19-27
    • Francis, C.A.1    Beman, J.M.2    Kuypers, M.M.M.3
  • 26
    • 54549126014 scopus 로고    scopus 로고
    • Towards a better understanding of microbial carbon flux in the sea
    • doi: 10.3354/ame01230
    • Gasol, J. M., et al. (2008), Towards a better understanding of microbial carbon flux in the sea, Aquat. Microb. Ecol., 53: 21-38, doi: 10.3354/ame01230.
    • (2008) Aquat. Microb. Ecol. , vol.53 , pp. 21-38
    • Gasol, J.M.1
  • 27
    • 33845479714 scopus 로고    scopus 로고
    • Erratum: Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine crenarchaeota (PLoS Biology (2006) 4, 12, (e437) DOI: 10.1371/journal.pbio.0040437)
    • DOI 10.1371/journal.pbio.0040095
    • Hallam, S. J., T. J. Mincer, C. Schleper, C. M. Preston, K. Roberts, P. M. Richardson, and, E. F. DeLong, (2006a), Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota, PLoS Biol., 4: e95, doi: 10.1371/journal.pbio.0040095. (Pubitemid 44917631)
    • (2006) PLoS Biology , vol.4 , Issue.12 , pp. 2412
    • DeLong, E.1    Hallam, S.2    Mincer, T.3    Schleper, C.4    Preston, C.5    Roberts, K.6    Richardson, P.7
  • 31
    • 54549084679 scopus 로고    scopus 로고
    • Regulation of aquatic microbial processes: The 'microbial loop' of the sunlit surface waters and the dark ocean dissected
    • doi: 10.3354/ame01225
    • Herndl, G. J., H. Agogué, F. Baltar, T. Reinthaler, E. Sintes, and, M. Varela, (2008), Regulation of aquatic microbial processes: the 'microbial loop' of the sunlit surface waters and the dark ocean dissected, Aquat. Microb. Ecol., 53: 59-68, doi: 10.3354/ame01225.
    • (2008) Aquat. Microb. Ecol. , vol.53 , pp. 59-68
    • Herndl, G.J.1    Agogué, H.2    Baltar, F.3    Reinthaler, T.4    Sintes, E.5    Varela, M.6
  • 33
  • 34
    • 0029729338 scopus 로고    scopus 로고
    • The global ocean flux of particulate organic carbon: Areal distribution and magnitude
    • DOI 10.1029/95GB03525
    • Jahnke, R., (1996) The global ocean flux of particulate organic carbon: areal distribution and magnitude, Global Biogeochem. Cycles, 10: 71-88, doi: 10.1029/95GB03525. (Pubitemid 26471662)
    • (1996) Global Biogeochemical Cycles , vol.10 , Issue.1 , pp. 71-88
    • Jahnke, R.A.1
  • 36
    • 0026272685 scopus 로고
    • Sulfide oxidation in the anoxic Black Sea chemocline
    • doi: 10.1016/S0198-0149(10)80025-1
    • Jørgensen, B. B., H. Fossing, C. O. Wirsen, H. W. Jannasch, (1991), Sulfide oxidation in the anoxic Black Sea chemocline, Deep-sea Res., 38: 1083-1103, doi: 10.1016/S0198-0149(10)80025-1.
    • (1991) Deep-sea Res. , vol.38 , pp. 1083-1103
    • Jørgensen, B.B.1    Fossing, H.2    Wirsen, C.O.3    Jannasch, H.W.4
  • 37
    • 34548737680 scopus 로고    scopus 로고
    • Feast and famine - Microbial life in the deep-sea bed
    • DOI 10.1038/nrmicro1745, PII NRMICRO1745
    • Jørgensen, B. B., and, A. Boetius, (2007), Feast and famine-microbial life in the deep-sea bed, Nature Rev. Microbiol., 5: 770-781, doi: 10.1038/nrmicro1745. (Pubitemid 47423765)
    • (2007) Nature Reviews Microbiology , vol.5 , Issue.10 , pp. 770-781
    • Jorgensen, B.B.1    Boetius, A.2
  • 39
    • 25644435673 scopus 로고    scopus 로고
    • Isolation of an autotrophic ammonia-oxidizing marine archaeon
    • DOI 10.1038/nature03911, PII N03911
    • Könneke, M., A. E. Bernhard, J. R. de la Torre, C. B. Walker, J. B. Waterbury, and, D. A. Sthal, (2005), Isolation of an autotrophic ammonia-oxidizing marine archaeon, Nature, 437: 543-546, doi: 10.1038/nature03911. (Pubitemid 41613550)
    • (2005) Nature , vol.437 , Issue.7058 , pp. 543-546
    • Konneke, M.1    Bernhard, A.E.2    De La Torre, J.R.3    Walker, C.B.4    Waterbury, J.B.5    Stahl, D.A.6
  • 40
    • 0034775280 scopus 로고    scopus 로고
    • Ammonia-oxidizing bacteria: A model for molecular microbial ecology
    • DOI 10.1146/annurev.micro.55.1.485
    • Kowalchuk, G. A., and, J. R. Stephen, (2001), Ammonia-oxidizing bacteria: a model for molecular microbial ecological research, Ann. Rev. Microbiol., 55: 485-529, doi: 10.1146/annurev.micro.55.1.485. (Pubitemid 32978114)
    • (2001) Annual Review of Microbiology , vol.55 , pp. 485-529
    • Kowalchuk, G.A.1    Stephen, J.R.2
  • 42
    • 80051936638 scopus 로고    scopus 로고
    • Unveiling microbial life in new deep-sea hypersaline Lake Thetis. Part I: Prokaryotes and environmental settings
    • doi: 10.1111/j.1462-2920.2011.02478.x
    • La Cono, V., et al. (2011), Unveiling microbial life in new deep-sea hypersaline Lake Thetis. Part I: prokaryotes and environmental settings, Environ. Microbiol., 13: 2250-69, doi: 10.1111/j.1462-2920.2011.02478.x.
    • (2011) Environ. Microbiol. , vol.13 , pp. 2250-2269
    • La Cono, V.1
  • 43
    • 0036668578 scopus 로고    scopus 로고
    • 1-guanyl-1,7-diaminoheptane, an inhibitor of deoxyhypusine synthase, on endothelial cell growth, differentiation and apoptosis
    • DOI 10.1023/A:1016535217038
    • Lee, Y., H. K. Kim, H. E. Park, M. H. Park, and, Y. A. Joe, (2002), Effect of N1-guanyl-1,7-diaminoheptane, an inhibitor of deoxyhypusine synthase, on endothelial cell growth, differentiation and apoptosis, Mol. Cell. Biochem., 237: 69-76, doi: 10.1023/A:1016535217038. (Pubitemid 34965794)
    • (2002) Molecular and Cellular Biochemistry , vol.237 , Issue.1-2 , pp. 69-76
    • Lee, Y.1    Kim, H.-K.2    Park, H.-E.3    Park, M.H.4    Joe, Y.A.5
  • 44
    • 36048942655 scopus 로고    scopus 로고
    • A time series of prokaryote secondary production in the oxygen minimum zone of the Humboldt current system, off central Chile
    • DOI 10.1016/j.pocean.2007.08.029, PII S007966110700167X, The Structure and Functioning of the Coastal Upwelling in Centgral/Southern Chile
    • Levipan, H. A., R. A. Quinones, and, H. Urrutia, (2007a), A time series of prokaryote secondary production in the oxygen minimum zone of the Humboldt Current System, Prog. Oceanogr., 75: 531-549, doi: 10.1016/j.pocean.2007.08.029. (Pubitemid 350101795)
    • (2007) Progress in Oceanography , vol.75 , Issue.3 , pp. 531-549
    • Levipan, H.A.1    Quinones, R.A.2    Urrutia, H.3
  • 45
    • 84983485108 scopus 로고    scopus 로고
    • Methylotrophic methanogens in the water column of an upwelling zone with a strong oxygen gradient off Central Chile
    • doi: 10.1264/jsme2.22.268
    • Levipan, H. A., R. A. Quinones, H. E. Johansson, and, H. Urrutia, (2007b), Methylotrophic methanogens in the water column of an upwelling zone with a strong oxygen gradient off Central Chile, Microbes Environ., 22: 268-278, doi: 10.1264/jsme2.22.268.
    • (2007) Microbes Environ. , vol.22 , pp. 268-278
    • Levipan, H.A.1    Quinones, R.A.2    Johansson, H.E.3    Urrutia, H.4
  • 46
    • 84863691368 scopus 로고    scopus 로고
    • Production of oceanic nitrous oxide by ammonia-oxidizing archaea
    • doi: 10.5194/bg-9-2419-2012
    • Loescher, C. R., A. Kock, M. Koenneke, J. LaRoche, H. W. Bange, and, R. A. Schmitz, (2012), Production of oceanic nitrous oxide by ammonia-oxidizing archaea, Biogeosciences, 9: 2419-2429, doi: 10.5194/bg-9-2419-2012.
    • (2012) Biogeosciences , vol.9 , pp. 2419-2429
    • Loescher, C.R.1    Kock, A.2    Koenneke, M.3    Laroche, J.4    Bange, H.W.5    Schmitz, R.A.6
  • 48
    • 0028983693 scopus 로고
    • Fine-scale vertical resolution of chlorophyll and photosynthetic parameters in shallow-water benthos
    • MacIntire, H. L., and, J. J. Cullen, (1995), Fine-scale vertical resolution of chlorophyll and photosynthetic parameters in shallow-water benthos, Mar. Ecol. Prog. Ser., 122: 227-237, doi: 10.3354/meps122227. (Pubitemid 26463047)
    • (1995) Marine Ecology Progress Series , vol.122 , Issue.1-3 , pp. 227-237
    • Macintyre, H.L.1    Cullen, J.J.2
  • 49
    • 0032768984 scopus 로고    scopus 로고
    • 2 fixation rates at deep-sea hydrothermal vents and the oxic/anoxic interface in Framvaren Fjord, Norway
    • DOI 10.1016/S0304-4203(99)00041-9, PII S0304420399000419
    • 2 fixation rates at deep-sea hydrothermal vents and the oxic-anoxic interface in Framvaren Fjord, Norway, Mar. Chem., 66: 201-213, doi: 10.1016/S0304-4203(99)00041-9. (Pubitemid 29400875)
    • (1999) Marine Chemistry , vol.66 , Issue.3-4 , pp. 201-213
    • Mandernack, K.W.1    Tebo, B.M.2
  • 50
    • 70350052417 scopus 로고    scopus 로고
    • Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
    • doi: 10.1038/nature08465
    • Martens-Habbena, W., P. M. Berube, H. Urakawa, J. R. de Torre, and, D. A. Stahl, (2009), Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria, Nature, 461: 976-981, doi: 10.1038/nature08465.
    • (2009) Nature , vol.461 , pp. 976-981
    • Martens-Habbena, W.1    Berube, P.M.2    Urakawa, H.3    De Torre, J.R.4    Stahl, D.A.5
  • 51
    • 49449099818 scopus 로고    scopus 로고
    • Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine Archaea from comparative metagenomic analyses of bathypelagic plankton of different ocean regions
    • doi: 10.1038/ismej.2008.40
    • Martín-Cuadrado, A. B., F. R. Valera, D. Moreira, C. J. Alba, E. I. Martínez, M. R. Henn, E. Talla, and, P. López-García, (2008), Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine Archaea from comparative metagenomic analyses of bathypelagic plankton of different ocean regions, ISME J., 2: 865-886, doi: 10.1038/ismej.2008.40.
    • (2008) ISME J. , vol.2 , pp. 865-886
    • Martín-Cuadrado, A.B.1    Valera, F.R.2    Moreira, D.3    Alba, C.J.4    Martínez, E.I.5    Henn, M.R.6    Talla, E.7    López-García, P.8
  • 52
    • 0000727233 scopus 로고
    • VERTEX: Carbon cycling in the northeastern Pacific
    • doi: 10.1016/0198-0149(87)90086-0
    • Martin, J. H., G. A. Knauer, D. M. Karl, and, W. W. Broenkow, (1987), VERTEX: Carbon cycling in the northeastern Pacific, Deep Sea Res. I, 34: 267-285, doi: 10.1016/0198-0149(87)90086-0.
    • (1987) Deep Sea Res. I , vol.34 , pp. 267-285
    • Martin, J.H.1    Knauer, G.A.2    Karl, D.M.3    Broenkow, W.W.4
  • 53
  • 54
    • 84855267451 scopus 로고    scopus 로고
    • Chemoautotrophy in the ocean
    • doi: 10.1029/2011GL049725
    • Middelburg, J., (2011), Chemoautotrophy in the ocean, Geophys. Res. Lett., 38, L24604, doi: 10.1029/2011GL049725.
    • (2011) Geophys. Res. Lett. , vol.38
    • Middelburg, J.1
  • 55
    • 84856974512 scopus 로고    scopus 로고
    • Reliability of CARD-FISH procedure for enumeration of Archaea in deep-sea surficial sediments
    • doi: 10.1007/s00284-011-0056-5
    • Molari, M., and, E. Manini, (2012), Reliability of CARD-FISH procedure for enumeration of Archaea in deep-sea surficial sediments, Curr. Microbiol., 64: 242-250, doi: 10.1007/s00284-011-0056-5.
    • (2012) Curr. Microbiol. , vol.64 , pp. 242-250
    • Molari, M.1    Manini, E.2
  • 56
    • 77954145249 scopus 로고    scopus 로고
    • Emerging concepts on microbial processes in the bathypelagic ocean - Ecology, biogeochemistry and genomics
    • doi: 10.1016/j.dsr2.2010.02.019
    • Nagata, T., et al. (2010), Emerging concepts on microbial processes in the bathypelagic ocean-ecology, biogeochemistry and genomics, Deep Sea Res. II, 57: 1519-1536, doi: 10.1016/j.dsr2.2010.02.019.
    • (2010) Deep Sea Res. II , vol.57 , pp. 1519-1536
    • Nagata, T.1
  • 57
    • 79958053971 scopus 로고    scopus 로고
    • Microbial ecology of the dark ocean above, at, and below the seafloor
    • doi: 10.1128/MMBR.00039-10
    • Orcutt, B. N., J. B. Sylvan, N. J. Knab, and, K. J. Edwards, (2011), Microbial ecology of the dark ocean above, at, and below the seafloor, Microbiol. Mol. Rev., 75: 361-422, doi: 10.1128/MMBR.00039-10.
    • (2011) Microbiol. Mol. Rev. , vol.75 , pp. 361-422
    • Orcutt, B.N.1    Sylvan, J.B.2    Knab, N.J.3    Edwards, K.J.4
  • 58
    • 0033754312 scopus 로고    scopus 로고
    • Marine planktonic archaea take up amino acids
    • doi: 10.1128/AEM.66.11.4829-4833.2000
    • Ouverney, C. C., and, J. A. Fuhrman, (2000), Marine planktonic archaea take up amino acids, Appl. Environ. Microbiol., 66: 4829-4833, doi: 10.1128/AEM.66.11.4829-4833.2000.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4829-4833
    • Ouverney, C.C.1    Fuhrman, J.A.2
  • 59
    • 0030767387 scopus 로고    scopus 로고
    • Hypusine is essential for eukaryotic cell proliferation
    • Park, M. H., Y. B. Lee, and, Y. A. Joe, (1997), Hypusine is essential for eukaryotic cell proliferation, Biol. Signals, 6: 115-123, doi: 10.1159/000109117. (Pubitemid 27380002)
    • (1997) Biological Signals , vol.6 , Issue.3 , pp. 115-123
    • Park, M.H.1    Lee, Y.B.2    Joe, Y.A.3
  • 60
    • 77954212697 scopus 로고    scopus 로고
    • Major contribution of autotrophy to microbial carbon cycling in the deep North Atlantic's interior
    • doi: 10.1016/j.dsr2.2010.02.023
    • Reinthaler, T., H. M. van Aken, and, G. J. Herndl, (2010), Major contribution of autotrophy to microbial carbon cycling in the deep North Atlantic's interior, Deep-Sea Res. II, 57: 1572-1580, doi: 10.1016/j.dsr2.2010. 02.023.
    • (2010) Deep-Sea Res. II , vol.57 , pp. 1572-1580
    • Reinthaler, T.1    Van Aken, H.M.2    Herndl, G.J.3
  • 61
    • 5644245207 scopus 로고    scopus 로고
    • 2 assimilation as a measure of metabolic activity in planktonic and sessile bacteria
    • DOI 10.1016/j.mimet.2004.08.002, PII S0167701204002210
    • 2 assimilation as a measure of metabolic activity in planktonic and sessile bacteria, J. Microbiol. Meth., 59: 381-393, doi: 10.1016/j.mimet.2004.08.002. (Pubitemid 39370800)
    • (2004) Journal of Microbiological Methods , vol.59 , Issue.3 , pp. 381-393
    • Roslev, P.1    Larsen, M.B.2    Jorgensen, D.3    Hesselsoe, M.4
  • 62
    • 80054738892 scopus 로고    scopus 로고
    • Enrichment and characterization of ammonia-oxidizing arhcaea from open ocean: Phylogeny, physiology and stable isotope fraction
    • doi: 10.1038/ismej.2011.58
    • Santoro, A. E., and, K. L. Casciotti, (2011), Enrichment and characterization of ammonia-oxidizing arhcaea from open ocean: phylogeny, physiology and stable isotope fraction, ISME J., 5: 1796-1808, doi: 10.1038/ismej.2011.58.
    • (2011) ISME J. , vol.5 , pp. 1796-1808
    • Santoro, A.E.1    Casciotti, K.L.2
  • 63
    • 80052490842 scopus 로고    scopus 로고
    • Isotopic signature of N2O produced by marine ammonia-oxidizing archaea
    • doi: 10.1126/science.1208239
    • Santoro, A. E., C. Buchwald, M. R. Mecllvin, and, K. L. Casciotti, (2011), Isotopic signature of N2O produced by marine ammonia-oxidizing archaea, Science, 333: 1282-1285, doi: 10.1126/science.1208239.
    • (2011) Science , vol.333 , pp. 1282-1285
    • Santoro, A.E.1    Buchwald, C.2    Mecllvin, M.R.3    Casciotti, K.L.4
  • 64
    • 84892253756 scopus 로고    scopus 로고
    • Second Edition. Springer-Verlag, Berlin, Germany
    • Schulz, H. D., and, M. Zabel, (2006), Marine geochemistry. Second Edition. Springer-Verlag, Berlin, Germany.
    • (2006) Marine Geochemistry
    • Schulz, H.D.1    Zabel, M.2
  • 65
    • 0005118594 scopus 로고
    • Microbial assimilation of carbon dioxide in the Japan Trench
    • Seki, H., and, C. E. ZoBell, (1967), Microbial assimilation of carbon dioxide in the Japan Trench, J. Oceanog. Soc. Japan, 23: 182-188.
    • (1967) J. Oceanog. Soc. Japan , vol.23 , pp. 182-188
    • Seki, H.1    Zobell, C.E.2
  • 66
    • 0001003553 scopus 로고
    • Protein content and protein synthesis rates of planktonic marine bacteria
    • Simon, M., and, F. Azam, (1989), Protein content and protein synthesis rates of planktonic marine bacteria, Mar. Ecol. Prog. Ser., 51: 201-213.
    • (1989) Mar. Ecol. Prog. Ser. , vol.51 , pp. 201-213
    • Simon, M.1    Azam, F.2
  • 67
    • 0344758478 scopus 로고    scopus 로고
    • Long-term discrepancy between food supply and demand in the deep eastern North Pacific
    • DOI 10.1126/science.284.5417.1174
    • Smith, K. L., and, R. S. Kaufmann, (1999), Long-term discrepancy between food supply and demand in the deep-eastern North Pacific, Science, 284: 1174-1177, doi: 10.1126/science.284.5417.1174. (Pubitemid 29288408)
    • (1999) Science , vol.284 , Issue.5417 , pp. 1174-1177
    • Smith Jr., K.L.1    Kaufmann, R.S.2
  • 68
    • 49049102904 scopus 로고    scopus 로고
    • Abyssal food limitation, ecosystem structure and climate change
    • doi: 10.1016/j.tree.2008.05.002
    • Smith, C. R., F. C. De Leo, A. F. Bernardino, A. K. Sweetman, and, P. M. Arbizu, (2008), Abyssal food limitation, ecosystem structure and climate change, Trends Ecol. Evol., 23: 518-528, doi: 10.1016/j.tree.2008.05.002.
    • (2008) Trends Ecol. Evol. , vol.23 , pp. 518-528
    • Smith, C.R.1    De Leo, F.C.2    Bernardino, A.F.3    Sweetman, A.K.4    Arbizu, P.M.5
  • 69
    • 80052479893 scopus 로고    scopus 로고
    • Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean
    • doi: 10.1126/science.1203690
    • Swan, B. K., et al. (2011), Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean, Science, 333: 1296-1300, doi: 10.1126/science.1203690.
    • (2011) Science , vol.333 , pp. 1296-1300
    • Swan, B.K.1
  • 71
    • 0036272628 scopus 로고    scopus 로고
    • Biopolymer hydrolysis and bacterial production under ambient hydrostatic pressure through a 2000 m water column in the NW Mediterranean
    • DOI 10.1016/S0967-0645(02)00030-9, PII S0967064502000309
    • Tamburini, C., J. Garcin, M. Ragot, and, A. Bianchi, (2002), Biopolymer hydrolysis and bacterial production under ambient hydrostatic pressure through a 2000 m water column in the NW Mediterranean, Deep Sea Res., Part II, 49: 2109-2123, doi: 10.1016/S0967-0645(02)00030-9. (Pubitemid 34609048)
    • (2002) Deep-Sea Research Part II: Topical Studies in Oceanography , vol.49 , Issue.11 , pp. 2109-2123
    • Tamburini, C.1    Garcin, J.2    Ragot, M.3    Bianchi, A.4
  • 72
    • 67349165864 scopus 로고    scopus 로고
    • Distribution and activity of bacteria and Archaea in the different water masses of Tyrhenian Sea
    • doi: 10.1016/j.dsr2.2008.07.021
    • Tamburini, C., M. Garel, B. Al Ali, B. Mérigot, P. Kriwy, B. Charrière, and, G. Budillon, (2009), Distribution and activity of bacteria and Archaea in the different water masses of Tyrhenian Sea, Deep-Sea Res. II, 56: 700-712, doi: 10.1016/j.dsr2.2008.07.021.
    • (2009) Deep-Sea Res. II , vol.56 , pp. 700-712
    • Tamburini, C.1    Garel, M.2    Al Ali, B.3    Mérigot, B.4    Kriwy, P.5    Charrière, B.6    Budillon, G.7
  • 73
    • 0035138967 scopus 로고    scopus 로고
    • Chemoautotrophy in the redox transition zone of the Cariaco Basin: A significant midwater source of organic carbon production
    • Taylor, G. T., M. Iabichella, H. Tung-yuan, M. Scranton, R. Thunell, F. Muller-Karger, and, R. Varela, (2001), Chemoautotrophy in the redox transition zone of the Cariaco Basin: a significant midwater source of organic carbon production, Limnol. Oceanogr., 46: 148-163, doi: 10.4319/lo.2001.46.1.0148. (Pubitemid 32106544)
    • (2001) Limnology and Oceanography , vol.46 , Issue.1 , pp. 148-163
    • Taylor, G.T.1    Iabichella, M.2    Ho, T.-Y.3    Scranton, M.I.4    Thunell, R.C.5    Muller-Karger, F.6    Varela, R.7
  • 74
    • 32944469326 scopus 로고    scopus 로고
    • Archaeal uptake of enantiomeric amino acids in the meso- and bathypelagic waters of the North Atlantic
    • Teira, E., H. van Aken, C. Veth, G. J. Herndl, (2006), Archaeal uptake of enantiomeric amino acids in the meso- and bathypelagic waters of the North Atlantic, Limnol. Oceanogr., 51: 60-69, doi: 10.4319/lo.2006.51.1.0060. (Pubitemid 43259693)
    • (2006) Limnology and Oceanography , vol.51 , Issue.1 , pp. 60-69
    • Teira, E.1    Van Aken, H.2    Veth, C.3    Herndl, G.J.4
  • 75
    • 79957684288 scopus 로고    scopus 로고
    • Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil
    • doi: 10.1073/pnas.1013488108
    • Tourna, M., et al. (2011), Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil, Proc. Natl. Acad. Sci. USA, 108: 8420-8425, doi: 10.1073/pnas.1013488108.
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 8420-8425
    • Tourna, M.1
  • 76
    • 0033848286 scopus 로고    scopus 로고
    • Bacteria in the cold deep-sea benthic boundary layer and sediment-water interface of the NE Atlantic
    • doi: 10.1111/j.1574-6941.2000.tb00731.x
    • Turley, C., (2000), Bacteria in the cold deep-sea benthic boundary layer and sediment-water interface of the NE Atlantic, FEMS Microbiol. Ecol., 33: 89-99, doi: 10.1111/j.1574-6941.2000.tb00731.x.
    • (2000) FEMS Microbiol. Ecol. , vol.33 , pp. 89-99
    • Turley, C.1
  • 78
    • 79958017622 scopus 로고    scopus 로고
    • Contribution of Crenarchaeota and Bacteria to autotrophy in the North Atlantic interior
    • doi: 10.1111/j.1462-2920.2011.02457.x
    • Varela, M. M., H. M. van Aken, E. Sintes, T. Reinthaler, and, G. J. Herndl, (2011), Contribution of Crenarchaeota and Bacteria to autotrophy in the North Atlantic interior, Environ. Microbiol., 13: 1524-1533, doi: 10.1111/j.1462-2920.2011.02457.x.
    • (2011) Environ. Microbiol. , vol.13 , pp. 1524-1533
    • Varela, M.M.1    Van Aken, H.M.2    Sintes, E.3    Reinthaler, T.4    Herndl, G.J.5
  • 80
    • 77952739182 scopus 로고    scopus 로고
    • Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea
    • doi: 10.1073/pnas.0913533107
    • Walker, C. B., et al. (2010), Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea, Proc. Natl. Acad. Sci. USA, 107: 8818-8823, doi: 10.1073/pnas.0913533107.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 8818-8823
    • Walker, C.B.1
  • 81
    • 0036638690 scopus 로고    scopus 로고
    • Benthic carbon mineralization in the Atlantic: A synthesis based on in-situ data from last decade
    • doi: 10.1016/S0967-0637(02)00025-0
    • Wenzhöfer, F., and, R. N. Glud, (2002), Benthic carbon mineralization in the Atlantic: a synthesis based on in-situ data from last decade, Deep-Sea Res. I, 49: 1255-1279, doi: 10.1016/S0967-0637(02)00025-0.
    • (2002) Deep-Sea Res. I , vol.49 , pp. 1255-1279
    • Wenzhöfer, F.1    Glud, R.N.2
  • 82
  • 84
    • 36849028081 scopus 로고    scopus 로고
    • Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea
    • DOI 10.1038/ismej.2007.83, PII ISMEJ200783
    • Yakimov, M. M., V. La Cono, R. Denaro, G. D'Auria, F. Decembrini, K. N. Timmis, P. N. Golyshin, and, L. Giuliano, (2007), Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea, ISME J., 1: 743-755, doi: 10.1038/ismej.2007.83. (Pubitemid 350231342)
    • (2007) ISME Journal , vol.1 , Issue.8 , pp. 743-755
    • Yakimov, M.M.1    La Cono, V.2    Denaro, R.3    D'Auria, G.4    Decembrini, F.5    Timmis, K.N.6    Golyshin, P.N.7    Giuliano, L.8
  • 85
    • 79956280960 scopus 로고    scopus 로고
    • Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea)
    • doi: 10.1038/ismej.2010.197
    • Yakimov, M. M., et al. (2011), Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea), ISME J., 5: 945-961, doi: 10.1038/ismej.2010.197.
    • (2011) ISME J. , vol.5 , pp. 945-961
    • Yakimov, M.M.1
  • 86
    • 79960807413 scopus 로고    scopus 로고
    • 2 fixation by marine prokaryote
    • doi: 10.1080/00032719.2010.526266
    • 2 fixation by marine prokaryote, Analytical Letters, 44, 1739-1745, doi: 10.1080/00032719.2010.526266.
    • (2011) Analytical Letters , vol.44 , pp. 1739-1745
    • Yamada, N.1    Suzumura, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.