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Volumn 10, Issue 1, 2013, Pages

A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: Application for characterizing coral reef fish gut contents

Author keywords

DNA barcoding; Food web; Mini barcode; Mitochondrial marker; Second generation sequencing; Trophic interactions

Indexed keywords

ANIMALIA; ANTHOZOA; APOGONIDAE; HOLOCENTRIDAE; METAZOA; OTUS;

EID: 84878895638     PISSN: None     EISSN: 17429994     Source Type: Journal    
DOI: 10.1186/1742-9994-10-34     Document Type: Article
Times cited : (1018)

References (68)
  • 1
    • 0033044421 scopus 로고    scopus 로고
    • Getting to the bottom of marine biodiversity: sedimentary habitats - ocean bottoms are the most widespread habitat on earth and support high biodiversity and key ecosystem services
    • Snelgrove PVR. Getting to the bottom of marine biodiversity: sedimentary habitats - ocean bottoms are the most widespread habitat on earth and support high biodiversity and key ecosystem services. Bioscience 1999, 49:129-138.
    • (1999) Bioscience , vol.49 , pp. 129-138
    • Snelgrove, P.V.R.1
  • 2
    • 70349871220 scopus 로고    scopus 로고
    • Zooplankton diversity analysis through single-gene sequencing of a community sample
    • Machida RJ, Hashiguchi Y, Nishida M, Nishida S. Zooplankton diversity analysis through single-gene sequencing of a community sample. Bmc Genomics 2009,
    • (2009) Bmc Genomics
    • Machida, R.J.1    Hashiguchi, Y.2    Nishida, M.3    Nishida, S.4
  • 3
    • 33644750034 scopus 로고    scopus 로고
    • Advances in molecular ecology: tracking trophic links through predator-prey food-webs
    • Sheppard SK, Harwood JD. Advances in molecular ecology: tracking trophic links through predator-prey food-webs. Funct Ecol 2005, 19:751-762.
    • (2005) Funct Ecol , vol.19 , pp. 751-762
    • Sheppard, S.K.1    Harwood, J.D.2
  • 4
    • 29144517946 scopus 로고    scopus 로고
    • Reverse taxonomy: an approach towards determining the diversity of meiobenthic organisms based on ribosomal RNA signature sequences
    • Markmann M, Tautz D. Reverse taxonomy: an approach towards determining the diversity of meiobenthic organisms based on ribosomal RNA signature sequences. Philos Trans Royal Soc B-Biol Sci 2005, 360:1917-1924.
    • (2005) Philos Trans Royal Soc B-Biol Sci , vol.360 , pp. 1917-1924
    • Markmann, M.1    Tautz, D.2
  • 5
    • 84859598363 scopus 로고    scopus 로고
    • Towards next-generation biodiversity assessment using DNA metabarcoding
    • 10.1111/j.1365-294X.2012.05470.x, 22486824
    • Taberlet P, Coissac E, Pompanon F, Brochmann C, Willerslev E. Towards next-generation biodiversity assessment using DNA metabarcoding. Mol Ecol 2012, 21:2045-2050. 10.1111/j.1365-294X.2012.05470.x, 22486824.
    • (2012) Mol Ecol , vol.21 , pp. 2045-2050
    • Taberlet, P.1    Coissac, E.2    Pompanon, F.3    Brochmann, C.4    Willerslev, E.5
  • 7
    • 84866642478 scopus 로고    scopus 로고
    • Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
    • Yu DW, Ji Y, Emerson BC, Wang X, Ye C, Yang C, Ding Z. Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring. Methods Ecol Evol 2012, 3:613-623.
    • (2012) Methods Ecol Evol , vol.3 , pp. 613-623
    • Yu, D.W.1    Ji, Y.2    Emerson, B.C.3    Wang, X.4    Ye, C.5    Yang, C.6    Ding, Z.7
  • 8
    • 65449140394 scopus 로고    scopus 로고
    • Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces
    • 10.1111/j.1365-294X.2009.04158.x, 19317847
    • Deagle BE, Kirkwood R, Jarman SN. Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces. Mol Ecol 2009, 18:2022-2038. 10.1111/j.1365-294X.2009.04158.x, 19317847.
    • (2009) Mol Ecol , vol.18 , pp. 2022-2038
    • Deagle, B.E.1    Kirkwood, R.2    Jarman, S.N.3
  • 9
    • 80053605834 scopus 로고    scopus 로고
    • DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches
    • 10.1371/journal.pone.0025776, 3188572, 21998697
    • Murray DC, Bunce M, Cannell BL, Oliver R, Houston J, White NE, Barrero RA, Bellgard MI, Haile J. DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches. PLoS One 2011, 6:e25776. 10.1371/journal.pone.0025776, 3188572, 21998697.
    • (2011) PLoS One , vol.6
    • Murray, D.C.1    Bunce, M.2    Cannell, B.L.3    Oliver, R.4    Houston, J.5    White, N.E.6    Barrero, R.A.7    Bellgard, M.I.8    Haile, J.9
  • 10
    • 84857669365 scopus 로고    scopus 로고
    • Prey preference of snow leopard (Panthera uncia) in South Gobi, Mongolia
    • 10.1371/journal.pone.0032104, 3290533, 22393381
    • Shehzad W, McCarthy TM, Pompanon F, Purevjav L, Coissac E, Riaz T, Taberlet P. Prey preference of snow leopard (Panthera uncia) in South Gobi, Mongolia. PloS One 2012, 7:e32104. 10.1371/journal.pone.0032104, 3290533, 22393381.
    • (2012) PloS One , vol.7
    • Shehzad, W.1    McCarthy, T.M.2    Pompanon, F.3    Purevjav, L.4    Coissac, E.5    Riaz, T.6    Taberlet, P.7
  • 11
    • 77956879874 scopus 로고    scopus 로고
    • Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out?
    • Deagle BE, Chiaradia A, McInnes J, Jarman SN. Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out?. Conserv Genet 2010, 11:2039-2048.
    • (2010) Conserv Genet , vol.11 , pp. 2039-2048
    • Deagle, B.E.1    Chiaradia, A.2    McInnes, J.3    Jarman, S.N.4
  • 15
    • 65349091290 scopus 로고    scopus 로고
    • Effect of PCR amplicon size on assessments of clone library microbial diversity and community structure
    • 10.1111/j.1462-2920.2008.01857.x, 2716130, 19220394
    • Huber JA, Morrison HG, Huse SM, Neal PR, Sogin ML, Mark Welch DB. Effect of PCR amplicon size on assessments of clone library microbial diversity and community structure. Environ Microbiol 2009, 11:1292-1302. 10.1111/j.1462-2920.2008.01857.x, 2716130, 19220394.
    • (2009) Environ Microbiol , vol.11 , pp. 1292-1302
    • Huber, J.A.1    Morrison, H.G.2    Huse, S.M.3    Neal, P.R.4    Sogin, M.L.5    Mark Welch, D.B.6
  • 16
    • 77951498638 scopus 로고    scopus 로고
    • Experimental factors affecting PCR-based estimates of microbial species richness and evenness
    • 10.1038/ismej.2009.153, 20090784
    • Engelbrektson A, Kunin V, Wrighton KC, Zvenigorodsky N, Chen F, Ochman H, Hugenholtz P. Experimental factors affecting PCR-based estimates of microbial species richness and evenness. ISME J 2010, 4:642-647. 10.1038/ismej.2009.153, 20090784.
    • (2010) ISME J , vol.4 , pp. 642-647
    • Engelbrektson, A.1    Kunin, V.2    Wrighton, K.C.3    Zvenigorodsky, N.4    Chen, F.5    Ochman, H.6    Hugenholtz, P.7
  • 18
    • 0036897767 scopus 로고    scopus 로고
    • A DNA-based method for identification of krill species and its application to analysing the diet of marine vertebrate predators
    • 10.1046/j.1365-294X.2002.01641.x, 12453250
    • Jarman SN, Gales NJ, Tierney M, Gill PC, Elliott NG. A DNA-based method for identification of krill species and its application to analysing the diet of marine vertebrate predators. Mol Ecol 2002, 11:2679-2690. 10.1046/j.1365-294X.2002.01641.x, 12453250.
    • (2002) Mol Ecol , vol.11 , pp. 2679-2690
    • Jarman, S.N.1    Gales, N.J.2    Tierney, M.3    Gill, P.C.4    Elliott, N.G.5
  • 19
    • 33748682933 scopus 로고    scopus 로고
    • Quantification of damage in DNA recovery from highly degraded samples - a case study on DNA in faeces
    • Deagle BE, Eveson JP, Jarman SN. Quantification of damage in DNA recovery from highly degraded samples - a case study on DNA in faeces. Frontiers Zool 2006, 3.
    • (2006) Frontiers Zool , vol.3
    • Deagle, B.E.1    Eveson, J.P.2    Jarman, S.N.3
  • 20
    • 79959397022 scopus 로고    scopus 로고
    • Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing
    • 10.1371/journal.pone.0021441, 3120876, 21731749
    • Bohmann K, Monadjem A, Noer CL, Rasmussen M, Zeale MRK, Clare E, Jones G, Willerslev E, Gilbert MTP. Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing. PLoS One 2011, 6:e21441. 10.1371/journal.pone.0021441, 3120876, 21731749.
    • (2011) PLoS One , vol.6
    • Bohmann, K.1    Monadjem, A.2    Noer, C.L.3    Rasmussen, M.4    Zeale, M.R.K.5    Clare, E.6    Jones, G.7    Willerslev, E.8    Gilbert, M.T.P.9
  • 21
    • 79953768954 scopus 로고    scopus 로고
    • Eating local: influences of habitat on the diet of little brown bats (Myotis lucifugus)
    • 10.1111/j.1365-294X.2011.05040.x, 21366747
    • Clare EL, Barber BR, Sweeney BW, Hebert PDN, Fenton MB. Eating local: influences of habitat on the diet of little brown bats (Myotis lucifugus). Mol Ecol 2011, 20:1772-1780. 10.1111/j.1365-294X.2011.05040.x, 21366747.
    • (2011) Mol Ecol , vol.20 , pp. 1772-1780
    • Clare, E.L.1    Barber, B.R.2    Sweeney, B.W.3    Hebert, P.D.N.4    Fenton, M.B.5
  • 22
    • 84866641975 scopus 로고    scopus 로고
    • PCR Primers for metazoan nuclear 18S and 28S ribosomal DNA sequences
    • 10.1371/journal.pone.0046180, 3458000, 23049971
    • Machida RJ, Knowlton N. PCR Primers for metazoan nuclear 18S and 28S ribosomal DNA sequences. PLoS One 2012, 7:e46180. 10.1371/journal.pone.0046180, 3458000, 23049971.
    • (2012) PLoS One , vol.7
    • Machida, R.J.1    Knowlton, N.2
  • 24
    • 0026300584 scopus 로고
    • Ribosomal DNA - molecular evolution and phylogenetic inference
    • 10.1086/417338, 1784710
    • Hillis D, Dixon M. Ribosomal DNA - molecular evolution and phylogenetic inference. Q Rev Biol 1991, 66:411-453. 10.1086/417338, 1784710.
    • (1991) Q Rev Biol , vol.66 , pp. 411-453
    • Hillis, D.1    Dixon, M.2
  • 26
    • 78149448601 scopus 로고    scopus 로고
    • Exploring the use of Cytochrome Oxidase c Subunit 1 (COI) for DNA barcoding of free-living marine nematodes
    • 10.1371/journal.pone.0013716, 2965665, 21060838
    • Derycke S, Vanaverbeke J, Rigaux A, Backeljau T, Moens T. Exploring the use of Cytochrome Oxidase c Subunit 1 (COI) for DNA barcoding of free-living marine nematodes. PLoS One 2010, 5:e13716. 10.1371/journal.pone.0013716, 2965665, 21060838.
    • (2010) PLoS One , vol.5
    • Derycke, S.1    Vanaverbeke, J.2    Rigaux, A.3    Backeljau, T.4    Moens, T.5
  • 27
    • 77956396642 scopus 로고    scopus 로고
    • Dissimilarity of species and forms of planktonic Neocalanus copepods using mitochondrial COI, 12S, Nuclear ITS, and 28S gene sequences
    • 10.1371/journal.pone.0010278, 2860979, 20442767
    • Machida RJ, Tsuda A. Dissimilarity of species and forms of planktonic Neocalanus copepods using mitochondrial COI, 12S, Nuclear ITS, and 28S gene sequences. PLoS One 2010, 5:e10278. 10.1371/journal.pone.0010278, 2860979, 20442767.
    • (2010) PLoS One , vol.5
    • Machida, R.J.1    Tsuda, A.2
  • 28
    • 84859864632 scopus 로고    scopus 로고
    • PCR primers for metazoan mitochondrial 12S ribosomal DNA sequences
    • 10.1371/journal.pone.0035887, 3334914, 22536450
    • Machida RJ, Kweskin M, Knowlton N. PCR primers for metazoan mitochondrial 12S ribosomal DNA sequences. PLoS One 2012, 7:e35887. 10.1371/journal.pone.0035887, 3334914, 22536450.
    • (2012) PLoS One , vol.7
    • Machida, R.J.1    Kweskin, M.2    Knowlton, N.3
  • 30
    • 0028528103 scopus 로고
    • DNA primers for amplification of mitochondrial cytochrome C oxidase subunit I from diverse metazoan invertebrates
    • Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome C oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 1994, 3:294-299.
    • (1994) Mol Mar Biol Biotechnol , vol.3 , pp. 294-299
    • Folmer, O.1    Black, M.2    Hoeh, W.3    Lutz, R.4    Vrijenhoek, R.5
  • 31
    • 0038268514 scopus 로고    scopus 로고
    • Molecular systematics of cowries (Gastropoda: Cypraeidae) and diversification patterns in the tropics
    • Meyer CP. Molecular systematics of cowries (Gastropoda: Cypraeidae) and diversification patterns in the tropics. Biol J Linn Soc 2003, 79:401-459.
    • (2003) Biol J Linn Soc , vol.79 , pp. 401-459
    • Meyer, C.P.1
  • 32
    • 77957719337 scopus 로고    scopus 로고
    • Design of phylum-specific hybrid primers for DNA barcoding: addressing the need for efficient COI amplification in the Echinodermata
    • Hoareau TB, Boissin E. Design of phylum-specific hybrid primers for DNA barcoding: addressing the need for efficient COI amplification in the Echinodermata. Mol ecol res 2010, 10:960-967.
    • (2010) Mol ecol res , vol.10 , pp. 960-967
    • Hoareau, T.B.1    Boissin, E.2
  • 34
    • 84879421731 scopus 로고    scopus 로고
    • Redesign of PCR primers for mitochondrial Cytochrome c oxidase subunit I for marine invertebrates and application in all-taxa biotic surveys
    • In press
    • Geller JB, Meyer CP, Parker M, Hawk H. Redesign of PCR primers for mitochondrial Cytochrome c oxidase subunit I for marine invertebrates and application in all-taxa biotic surveys. Mol Ecol Res In press.
    • Mol Ecol Res
    • Geller, J.B.1    Meyer, C.P.2    Parker, M.3    Hawk, H.4
  • 35
    • 1942445302 scopus 로고    scopus 로고
    • Using fish stomachs as samplers of the benthos: integrating long-term and broad scales
    • Link JS. Using fish stomachs as samplers of the benthos: integrating long-term and broad scales. Mar Ecol Prog Ser 2004, 269:265-275.
    • (2004) Mar Ecol Prog Ser , vol.269 , pp. 265-275
    • Link, J.S.1
  • 36
    • 84861393798 scopus 로고    scopus 로고
    • Species of the ocean: improving our understanding of biodiversity and ecosystem functioning using fish as sampling tools
    • Cook A, Bundy A. Species of the ocean: improving our understanding of biodiversity and ecosystem functioning using fish as sampling tools. Mar Ecol Prog Ser 2012, 454:1-18.
    • (2012) Mar Ecol Prog Ser , vol.454 , pp. 1-18
    • Cook, A.1    Bundy, A.2
  • 37
    • 1942517869 scopus 로고    scopus 로고
    • Group-specific polymerase chain reaction for DNA-based analysis of species diversity and identity in dietary samples
    • 10.1111/j.1365-294X.2004.02109.x, 15078466
    • Jarman SN, Deagle BE, Gales NJ. Group-specific polymerase chain reaction for DNA-based analysis of species diversity and identity in dietary samples. Mol Ecol 2004, 13:1313-1322. 10.1111/j.1365-294X.2004.02109.x, 15078466.
    • (2004) Mol Ecol , vol.13 , pp. 1313-1322
    • Jarman, S.N.1    Deagle, B.E.2    Gales, N.J.3
  • 38
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA. BioEdit: a user friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 1999, 41:95-98.
    • (1999) Nucleic Acids Symposium Series , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 41
    • 49749128451 scopus 로고    scopus 로고
    • Blocking primers to enhance PCR amplification of rare sequences in mixed samples - a case study on prey DNA in Antarctic krill stomachs
    • Vestheim H, Jarman SN. Blocking primers to enhance PCR amplification of rare sequences in mixed samples - a case study on prey DNA in Antarctic krill stomachs. Frontiers Zool 2008, 5.
    • (2008) Frontiers Zool , vol.5
    • Vestheim, H.1    Jarman, S.N.2
  • 42
    • 83955165237 scopus 로고    scopus 로고
    • PCR enrichment techniques to identify the diet of predators
    • 10.1111/j.1755-0998.2011.03091.x, 22145916
    • O'Rorke R, Lavery S, Jeffs A. PCR enrichment techniques to identify the diet of predators. Mol Ecol Resour 2012, 12:5-17. 10.1111/j.1755-0998.2011.03091.x, 22145916.
    • (2012) Mol Ecol Resour , vol.12 , pp. 5-17
    • O'Rorke, R.1    Lavery, S.2    Jeffs, A.3
  • 43
    • 84876003047 scopus 로고    scopus 로고
    • Effectiveness of annealing blocking primers versus restriction enzymes for characterization of generalist diets: unexpected prey revealed in the gut contents of two coral reef fish species
    • 10.1371/journal.pone.0058076, 3620324, 23579925
    • Leray M, Agudelo N, Mills SC, Meyer CP. Effectiveness of annealing blocking primers versus restriction enzymes for characterization of generalist diets: unexpected prey revealed in the gut contents of two coral reef fish species. PLoS One 2013, 8(4):e58076. 10.1371/journal.pone.0058076, 3620324, 23579925.
    • (2013) PLoS One , vol.8 , Issue.4
    • Leray, M.1    Agudelo, N.2    Mills, S.C.3    Meyer, C.P.4
  • 47
    • 80052824121 scopus 로고    scopus 로고
    • MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codons
    • 10.1371/journal.pone.0022594, 3174933, 21949676
    • Ranwez V, Harispe S, Delsuc F, Douzery EJP. MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codons. PLoS One 2011, 6:e22594. 10.1371/journal.pone.0022594, 3174933, 21949676.
    • (2011) PLoS One , vol.6
    • Ranwez, V.1    Harispe, S.2    Delsuc, F.3    Douzery, E.J.P.4
  • 48
    • 80051688000 scopus 로고    scopus 로고
    • Field guide to next-generation DNA sequencers
    • 10.1111/j.1755-0998.2011.03024.x, 21592312
    • Glenn TC. Field guide to next-generation DNA sequencers. Mol Ecol Resour 2011, 11:759-769. 10.1111/j.1755-0998.2011.03024.x, 21592312.
    • (2011) Mol Ecol Resour , vol.11 , pp. 759-769
    • Glenn, T.C.1
  • 49
    • 79961181125 scopus 로고    scopus 로고
    • UCHIME improves sensitivity and speed of chimera detection
    • 10.1093/bioinformatics/btr381, 3150044, 21700674
    • Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 2011, 27:2194-2200. 10.1093/bioinformatics/btr381, 3150044, 21700674.
    • (2011) Bioinformatics , vol.27 , pp. 2194-2200
    • Edgar, R.C.1    Haas, B.J.2    Clemente, J.C.3    Quince, C.4    Knight, R.5
  • 50
    • 79952001955 scopus 로고    scopus 로고
    • Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering
    • 10.1093/bioinformatics/btq725, 3042185, 21233169
    • Hao X, Jiang R, Chen T. Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering. Bioinformatics 2011, 27:611-618. 10.1093/bioinformatics/btq725, 3042185, 21233169.
    • (2011) Bioinformatics , vol.27 , pp. 611-618
    • Hao, X.1    Jiang, R.2    Chen, T.3
  • 51
    • 84859299512 scopus 로고    scopus 로고
    • Using DNA barcoding and standardized sampling to compare geographic and habitat differentiation of crustaceans: a Hawaiian islands example
    • Plaisance L, Brainard RE, Caley MJ, Knowlton N. Using DNA barcoding and standardized sampling to compare geographic and habitat differentiation of crustaceans: a Hawaiian islands example. Diversity 2011, 4:581-591.
    • (2011) Diversity , vol.4 , pp. 581-591
    • Plaisance, L.1    Brainard, R.E.2    Caley, M.J.3    Knowlton, N.4
  • 52
    • 70350556843 scopus 로고    scopus 로고
    • Reef-associated crustacean fauna: biodiversity estimates using semi-quantitative sampling and DNA barcoding
    • Plaisance L, Knowlton N, Paulay G, Meyer CP. Reef-associated crustacean fauna: biodiversity estimates using semi-quantitative sampling and DNA barcoding. Coral Reefs 2009, 28:977-986.
    • (2009) Coral Reefs , vol.28 , pp. 977-986
    • Plaisance, L.1    Knowlton, N.2    Paulay, G.3    Meyer, C.P.4
  • 54
    • 53849133826 scopus 로고    scopus 로고
    • Statistical assignment of DNA sequences using bayesian phylogenetics
    • 10.1080/10635150802422316, 18853361
    • Munch K, Boomsma W, Huelsenbeck JP, Willerslev E, Nielsen R. Statistical assignment of DNA sequences using bayesian phylogenetics. Syst Biol 2008, 57:750-757. 10.1080/10635150802422316, 18853361.
    • (2008) Syst Biol , vol.57 , pp. 750-757
    • Munch, K.1    Boomsma, W.2    Huelsenbeck, J.P.3    Willerslev, E.4    Nielsen, R.5
  • 56
    • 84860353239 scopus 로고    scopus 로고
    • Moorea BIOCODE barcode library as a tool for understanding predator-prey interactions: insights into the diet of common predatory coral reef fishes
    • Leray M, Boehm JT, Mills SC, Meyer CP. Moorea BIOCODE barcode library as a tool for understanding predator-prey interactions: insights into the diet of common predatory coral reef fishes. Coral reefs 2012, 31:383-388.
    • (2012) Coral reefs , vol.31 , pp. 383-388
    • Leray, M.1    Boehm, J.T.2    Mills, S.C.3    Meyer, C.P.4
  • 57
    • 70349422298 scopus 로고    scopus 로고
    • Barcoding bamboozled by bacteria: convergence to metazoan mitochondrial primer targets by marine microbes
    • 10.1093/sysbio/syp033, 20525598
    • Siddall ME, Fontanella FM, Watson SC, Kvist S, Erseus C. Barcoding bamboozled by bacteria: convergence to metazoan mitochondrial primer targets by marine microbes. Syst Biol 2009, 58:445-451. 10.1093/sysbio/syp033, 20525598.
    • (2009) Syst Biol , vol.58 , pp. 445-451
    • Siddall, M.E.1    Fontanella, F.M.2    Watson, S.C.3    Kvist, S.4    Erseus, C.5
  • 58
    • 71249098117 scopus 로고    scopus 로고
    • Fonctionnement trophique d'un écosystème récifal en Polynésie française
    • Arias-Gonzalez J, Hertel O, Galzin R. Fonctionnement trophique d'un écosystème récifal en Polynésie française. Cybium 1998, 22:1-24.
    • (1998) Cybium , vol.22 , pp. 1-24
    • Arias-Gonzalez, J.1    Hertel, O.2    Galzin, R.3
  • 59
    • 10344227715 scopus 로고    scopus 로고
    • Spatial, ontogenetic, and temporal variation in the feeding habits of the squirrelfish Sargocentron microstoma on reefs in Moorea, French Polynesia
    • Arias-Gonzalez JE, Galzin R, Harmelin-Vivien M. Spatial, ontogenetic, and temporal variation in the feeding habits of the squirrelfish Sargocentron microstoma on reefs in Moorea, French Polynesia. Bull Mar Sci 2004, 75:473-480.
    • (2004) Bull Mar Sci , vol.75 , pp. 473-480
    • Arias-Gonzalez, J.E.1    Galzin, R.2    Harmelin-Vivien, M.3
  • 61
    • 58549106807 scopus 로고    scopus 로고
    • Quantification of copepod gut content by differential length amplification quantitative PCR (dla-qPCR)
    • Troedsson C, Simonelli P, Nagele V, Nejstgaard JC, Frischer ME. Quantification of copepod gut content by differential length amplification quantitative PCR (dla-qPCR). Mar Biol 2009, 156:253-259.
    • (2009) Mar Biol , vol.156 , pp. 253-259
    • Troedsson, C.1    Simonelli, P.2    Nagele, V.3    Nejstgaard, J.C.4    Frischer, M.E.5
  • 62
    • 0037310350 scopus 로고    scopus 로고
    • The correlation between rDNA copy number and genome size in eukaryotes
    • 10.1139/g02-103, 12669795
    • Prokopowich C, Gregory T, Crease T. The correlation between rDNA copy number and genome size in eukaryotes. Genome 2003, 46:48-50. 10.1139/g02-103, 12669795.
    • (2003) Genome , vol.46 , pp. 48-50
    • Prokopowich, C.1    Gregory, T.2    Crease, T.3
  • 63
    • 34247605387 scopus 로고    scopus 로고
    • Quantitative analysis of prey DNA in pinniped faeces: potential to estimate diet composition?
    • Deagle BE, Tollit DJ. Quantitative analysis of prey DNA in pinniped faeces: potential to estimate diet composition?. Conserv Genet 2007, 8:743-747.
    • (2007) Conserv Genet , vol.8 , pp. 743-747
    • Deagle, B.E.1    Tollit, D.J.2
  • 64
    • 84859850496 scopus 로고    scopus 로고
    • Acanthaster planci outbreak: decline in coral health, coral size structure modification and consequences for obligate decapod assemblages
    • 10.1371/journal.pone.0035456, 3328453, 22530026
    • Leray M, Beraud M, Anker A, Chancerelle Y, Mills S. Acanthaster planci outbreak: decline in coral health, coral size structure modification and consequences for obligate decapod assemblages. PLoS One 2012, 7:e35456. 10.1371/journal.pone.0035456, 3328453, 22530026.
    • (2012) PLoS One , vol.7
    • Leray, M.1    Beraud, M.2    Anker, A.3    Chancerelle, Y.4    Mills, S.5
  • 65
    • 84867302510 scopus 로고    scopus 로고
    • Predator crown-of-thorns starfish (Acanthaster planci) outbreak, mass mortality of corals, and cascading effects on reef fish and benthic communities
    • 10.1371/journal.pone.0047363, 3466260, 23056635
    • Kayal M, Vercelloni J, Lison De Loma T, Bosserelle P, Chancerelle Y, Geoffroy S, Stievenart C, Michonneau F, Penin L, Planes S, Adjeroud M. Predator crown-of-thorns starfish (Acanthaster planci) outbreak, mass mortality of corals, and cascading effects on reef fish and benthic communities. PLoS One 2012, 7:e47363. 10.1371/journal.pone.0047363, 3466260, 23056635.
    • (2012) PLoS One , vol.7
    • Kayal, M.1    Vercelloni, J.2    Lison De Loma, T.3    Bosserelle, P.4    Chancerelle, Y.5    Geoffroy, S.6    Stievenart, C.7    Michonneau, F.8    Penin, L.9    Planes, S.10    Adjeroud, M.11
  • 66
    • 0000184470 scopus 로고
    • Fish predation and its impact on the invertebrates of coral reefs and adjacent sediments
    • New York: Academic Press, Sale P
    • Jones G, Ferrell D, Sale P. Fish predation and its impact on the invertebrates of coral reefs and adjacent sediments. The ecology of fishes on coral reefs 1991, 156-178. New York: Academic Press, Sale P.
    • (1991) The ecology of fishes on coral reefs , pp. 156-178
    • Jones, G.1    Ferrell, D.2    Sale, P.3
  • 67
    • 34548838852 scopus 로고    scopus 로고
    • Devil in the details: high-resolution dietary analysis contradicts a basic assumption of reef-fish diversity models
    • Longenecker K. Devil in the details: high-resolution dietary analysis contradicts a basic assumption of reef-fish diversity models. Copeia 2007, 3:543-555.
    • (2007) Copeia , vol.3 , pp. 543-555
    • Longenecker, K.1
  • 68
    • 0346664358 scopus 로고    scopus 로고
    • The ecology of individuals: incidence and implications of individual specialization
    • 10.1086/343878, 12650459
    • Bolnick DI, Svanback R, Fordyce JA, Yang LH, Davis JM, Hulsey CD, Forister ML. The ecology of individuals: incidence and implications of individual specialization. Am Nat 2003, 161:1-28. 10.1086/343878, 12650459.
    • (2003) Am Nat , vol.161 , pp. 1-28
    • Bolnick, D.I.1    Svanback, R.2    Fordyce, J.A.3    Yang, L.H.4    Davis, J.M.5    Hulsey, C.D.6    Forister, M.L.7


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