메뉴 건너뛰기




Volumn 82, Issue 3, 2013, Pages 373-382

Composition of the microbial communities of bituminous constructions at natural oil seeps at the bottom of Lake Baikal

Author keywords

16S rRNA; bituminous constructions; hydrocarbon biodegradation; Lake Baikal; oil seep; pyrosequencing; syntrophy

Indexed keywords

ACIDOBACTERIA; ACTINOBACTERIA; ALPHAPROTEOBACTERIA; ARCHAEA; BACTERIA (MICROORGANISMS); BACTEROIDETES; BETAPROTEOBACTERIA; DELTAPROTEOBACTERIA; METHANOBACTERIALES; METHANOMICROBIALES; METHANOSARCINALES; PROTEOBACTERIA; SYNTROPHUS;

EID: 84878796425     PISSN: 00262617     EISSN: None     Source Type: Journal    
DOI: 10.1134/S0026261713030168     Document Type: Article
Times cited : (13)

References (30)
  • 3
    • 0033988029 scopus 로고    scopus 로고
    • Hydrothermal petroleum from lacustrine sedimentary organic matter in the East African Rift
    • Simoneit, B. R. T., Aboul-Kassim, T. A. T., and Tiercelin, J. J., Hydrothermal petroleum from lacustrine sedimentary organic matter in the East African Rift, Appl. Geochem., 2000, vol. 15, pp. 355-368.
    • (2000) Appl. Geochem. , vol.15 , pp. 355-368
    • Simoneit, B.R.T.1    Aboul-Kassim, T.A.T.2    Tiercelin, J.J.3
  • 4
    • 27844593745 scopus 로고    scopus 로고
    • Hydrothermal bitumen generated from sedimentary organic matter of rift lakes-Lake Chapala, Citala Rift, Western Mexico
    • Zárate-del Valle, P. F. and Simoneit, B. R. T., Hydrothermal bitumen generated from sedimentary organic matter of rift lakes-Lake Chapala, Citala Rift, Western Mexico, Appl. Geochem., 2005, vol. 20, pp. 2343-2350.
    • (2005) Appl. Geochem. , vol.20 , pp. 2343-2350
    • Zárate-Del Valle, P.F.1    Simoneit, B.R.T.2
  • 8
    • 77952957323 scopus 로고    scopus 로고
    • Geochemical and microbiological characteristics of sediments near the Malenky mud volcano (Lake Baikal, Russia), with evidence of Archaea intermediate between the marine anaerobic methanotrophs ANME-2 and ANME-3
    • Zemskaya, T. I., Pogodaeva, T. V., Shubenkova, O. V., Chernitsina, S. M., Khlystov, O. M., Dagurova, O. P., Buryukhaev, S. P., Namsaraev, B. B., Egorov, A. V., Krylov, A. A., and Kalmychkov, G. V., Geochemical and microbiological characteristics of sediments near the Malenky mud volcano (Lake Baikal, Russia), with evidence of Archaea intermediate between the marine anaerobic methanotrophs ANME-2 and ANME-3, Geo-Mar. Lett., 2010, vol. 30, p. 411-425.
    • (2010) Geo-Mar. Lett. , vol.30 , pp. 411-425
    • Zemskaya, T.I.1    Pogodaeva, T.V.2    Shubenkova, O.V.3    Chernitsina, S.M.4    Khlystov, O.M.5    Dagurova, O.P.6    Buryukhaev, S.P.7    Namsaraev, B.B.8    Egorov, A.V.9    Krylov, A.A.10    Kalmychkov, G.V.11
  • 9
    • 23744452462 scopus 로고    scopus 로고
    • The first results of a study of the phylogenetic diversity of microorganisms in southern Baikal sediments from the area of subsurface depositions of methane hydrate
    • Shubenkova, O. V., Zemskaya, T. I., Chernitsyna, S. M., Khlystov, O. M., and Triboi, T. I., The first results of a study of the phylogenetic diversity of microorganisms in southern Baikal sediments from the area of subsurface depositions of methane hydrate, Microbiology, 2005, vol. 74, pp. 314-320.
    • (2005) Microbiology , vol.74 , pp. 314-320
    • Shubenkova, O.V.1    Zemskaya, T.I.2    Chernitsyna, S.M.3    Khlystov, O.M.4    Triboi, T.I.5
  • 10
    • 0029068827 scopus 로고
    • Partial gene sequences for the A subunit of methyl-coenzyme M reductase (McrI) as a phylogenetic tool for the family Methanosarcinaceae
    • Springer, E., Sachs, M. S., Woese, C. R., and Boone, D. R., Partial gene sequences for the A subunit of methyl-coenzyme M reductase (McrI) as a phylogenetic tool for the family Methanosarcinaceae, Int. J. Syst. Bacteriol., 1995, vol. 45, p. 554-559.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 554-559
    • Springer, E.1    Sachs, M.S.2    Woese, C.R.3    Boone, D.R.4
  • 11
    • 0038384754 scopus 로고    scopus 로고
    • Design of PCR primers and gene probes for general detection of alkane-degrading bacteria
    • Kohno, T., Sugimoto, Y., Sei, K., and Mori, K., Design of PCR primers and gene probes for general detection of alkane-degrading bacteria, Microbes and Environments, 2002, vol. 17, pp. 114-121.
    • (2002) Microbes and Environments , vol.17 , pp. 114-121
    • Kohno, T.1    Sugimoto, Y.2    Sei, K.3    Mori, K.4
  • 12
    • 79551476785 scopus 로고    scopus 로고
    • Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions
    • Behnke, A., Engel, M., Christen, R., Nebel, M., Klein, R. R., and Stoeck, T., Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions, Environ. Microbiol., 2011, vol. 13, pp. 340-349.
    • (2011) Environ. Microbiol. , vol.13 , pp. 340-349
    • Behnke, A.1    Engel, M.2    Christen, R.3    Nebel, M.4    Klein, R.R.5    Stoeck, T.6
  • 14
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F., and Higgins, D. G., The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools, Nucleic Acids Res., 1997, vol. 24, pp. 4876-4882.
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 15
    • 0028509254 scopus 로고
    • TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
    • van de Peer, Y. and De Wachter, R., TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment, Comput. Appl. Biosci., 1994, vol. 10, pp. 569-570.
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 569-570
    • van de Peer, Y.1    De Wachter, R.2
  • 16
    • 0035370088 scopus 로고    scopus 로고
    • Anaerobic biodegradation of saturated and aromatic hydrocarbons
    • Widdel, F. and Rabus, R., Anaerobic biodegradation of saturated and aromatic hydrocarbons, Curr. Opin. Biotechnol., 2001, vol. 12, pp. 259-276.
    • (2001) Curr. Opin. Biotechnol. , vol.12 , pp. 259-276
    • Widdel, F.1    Rabus, R.2
  • 17
    • 0033108165 scopus 로고    scopus 로고
    • Anaerobic utilization of alkylbenzenes and n-alkanes from crude oil in an enrichment culture of denitrifying bacteria affiliating with the beta-subclass of Proteobacteria
    • Rabus, R., Wilkes, H., Schramm, A., Harms, G., Behrends, A., Amann, R., and Widdel, F., Anaerobic utilization of alkylbenzenes and n-alkanes from crude oil in an enrichment culture of denitrifying bacteria affiliating with the beta-subclass of Proteobacteria, Environ. Microbiol, 1999, vol. 1, pp. 145-157.
    • (1999) Environ. Microbiol , vol.1 , pp. 145-157
    • Rabus, R.1    Wilkes, H.2    Schramm, A.3    Harms, G.4    Behrends, A.5    Amann, R.6    Widdel, F.7
  • 18
    • 0036188547 scopus 로고    scopus 로고
    • Functional analysis of alkane hydroxylases from Gram-negative and Gram-positive bacteria
    • Smits, T. H. M., Balada, S. B., Witholt, B., and van Beilen, J. B., Functional analysis of alkane hydroxylases from Gram-negative and Gram-positive bacteria, J. Bacteriol., 2002, vol. 184, pp. 1733-1742.
    • (2002) J. Bacteriol. , vol.184 , pp. 1733-1742
    • Smits, T.H.M.1    Balada, S.B.2    Witholt, B.3    van Beilen, J.B.4
  • 19
    • 0035064602 scopus 로고    scopus 로고
    • Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermoglucosidasius and Bacillus thermodenitrificans to Geobacillus as the new combinations
    • G. stearothermophilus, G. thermocatenulatus, G. thermoleovorans, G. kaustophilus, G. thermoglucosidasius and G. thermodenitrificans
    • Nazina, T. N., Tourova, T. P., Poltaraus, A. B., Novikova, E. V., Grigoryan, A. A., Ivanova, A. E., Lysenko, A. M., Petrunyaka, V. V., Osipov, G. A., Belyaev, S. S., and Ivanov, M. V., Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermoglucosidasius and Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. thermocatenulatus, G. thermoleovorans, G. kaustophilus, G. thermoglucosidasius and G. thermodenitrificans, Int. J. Syst. Evol. Microbiol, 2001, vol. 51, pp. 433-446.
    • (2001) Int. J. Syst. Evol. Microbiol , vol.51 , pp. 433-446
    • Nazina, T.N.1    Tourova, T.P.2    Poltaraus, A.B.3    Novikova, E.V.4    Grigoryan, A.A.5    Ivanova, A.E.6    Lysenko, A.M.7    Petrunyaka, V.V.8    Osipov, G.A.9    Belyaev, S.S.10    Ivanov, M.V.11
  • 22
    • 0030871461 scopus 로고    scopus 로고
    • Energetics of syntrophic cooperation in methanogenic degradation
    • Schink, B., Energetics of syntrophic cooperation in methanogenic degradation, Microbiol. Mol. Biol. Rev., 1997, vol. 61, pp. 262-280.
    • (1997) Microbiol. Mol. Biol. Rev. , vol.61 , pp. 262-280
    • Schink, B.1
  • 23
    • 0033575903 scopus 로고    scopus 로고
    • Methane formation from long-chain alkanes by anaerobic microorganisms
    • Zengler, K., Richnow, H. H., Rossello-Mora, R., Michaelis, W., and Widdel, F., Methane formation from long-chain alkanes by anaerobic microorganisms, Nature, 1999, vol. 401, pp. 266-269.
    • (1999) Nature , vol.401 , pp. 266-269
    • Zengler, K.1    Richnow, H.H.2    Rossello-Mora, R.3    Michaelis, W.4    Widdel, F.5
  • 24
    • 0034643317 scopus 로고    scopus 로고
    • Hexadecane decay by methanogenesis
    • Anderson, R. T. and Lovley, D. R., Hexadecane decay by methanogenesis, Nature, 2000, vol. 404, pp. 722-723.
    • (2000) Nature , vol.404 , pp. 722-723
    • Anderson, R.T.1    Lovley, D.R.2
  • 26
    • 33744762131 scopus 로고    scopus 로고
    • Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria
    • Nakatsu, C. H., Hristova, K., Hanada, S., Meng, X. Y., Hanson, J. R., Scow, K. M., and Kamagata, Y., Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria, Int. J. Syst. Evol. Microbiol., 2006, vol. 56, pp. 983-989.
    • (2006) Int. J. Syst. Evol. Microbiol. , vol.56 , pp. 983-989
    • Nakatsu, C.H.1    Hristova, K.2    Hanada, S.3    Meng, X.Y.4    Hanson, J.R.5    Scow, K.M.6    Kamagata, Y.7
  • 27
    • 41349083576 scopus 로고    scopus 로고
    • Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea
    • Liu, Y. and Whitman, W. B., Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea, Ann. N. Y. Acad. Sci., 2008, vol. 1125, pp. 171-189.
    • (2008) Ann. N. Y. Acad. Sci. , vol.1125 , pp. 171-189
    • Liu, Y.1    Whitman, W.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.