-
1
-
-
45749095936
-
Two angular dioxygenases contribute to the metabolic versatility of dibenzofuran-degrading Rhodococcus sp. strain HA01
-
10.1128/AEM.00226-08 1:CAS:528:DC%2BD1cXnvFWlsb4%3D
-
Aly HAH, Huu NB, Wray V, Junca H, Pieper DH (2008) Two angular dioxygenases contribute to the metabolic versatility of dibenzofuran-degrading Rhodococcus sp. strain HA01. Appl Environ Microbiol 74:3812-3822
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 3812-3822
-
-
Aly, H.A.H.1
Huu, N.B.2
Wray, V.3
Junca, H.4
Pieper, D.H.5
-
2
-
-
0031859323
-
Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: Catabolic genes dispersed on the genome
-
1:CAS:528:DyaK1cXlt1Chtrg%3D
-
Armengaud J, Happe B, Timmis KN (1998) Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: catabolic genes dispersed on the genome. J Bacteriol 180:3954-3966
-
(1998)
J Bacteriol
, vol.180
, pp. 3954-3966
-
-
Armengaud, J.1
Happe, B.2
Timmis, K.N.3
-
3
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
10.1016/0003-2697(76)90527-3 1:CAS:528:DyaE28XksVehtrY%3D
-
Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
4
-
-
0034084433
-
Bacterial metabolism of fluorene, dibenzofuran, dibenzothiophene, and carbazole
-
10.1139/w00-017 1:CAS:528:DC%2BD3cXjs12jtL8%3D
-
Bressler DC, Fedorak PM (2000) Bacterial metabolism of fluorene, dibenzofuran, dibenzothiophene, and carbazole. Can J Microbiol 46:397-409
-
(2000)
Can J Microbiol
, vol.46
, pp. 397-409
-
-
Bressler, D.C.1
Fedorak, P.M.2
-
5
-
-
0030740918
-
Conservation of plasmid-encoded dibenzothiophene desulfurization genes in several rhodococci
-
1:CAS:528:DyaK2sXktlektLs%3D
-
Denis-Larose C, Labbe D, Bergeron H, Jones AM, Greer CW, Al-Hawari J, Grossman MJ, Sankey BM, Lau P (1997) Conservation of plasmid-encoded dibenzothiophene desulfurization genes in several rhodococci. Appl Environ Microbiol 63:2915-2919
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 2915-2919
-
-
Denis-Larose, C.1
Labbe, D.2
Bergeron, H.3
Jones, A.M.4
Greer, C.W.5
Al-Hawari, J.6
Grossman, M.J.7
Sankey, B.M.8
Lau, P.9
-
6
-
-
0025264586
-
Metabolism of dibenzofuran by Pseudomonas sp. strain HH69 and the mixed culture HH27
-
1:CAS:528:DyaK3cXksFGmurc%3D
-
Fortnagel P, Harms H, Wittich RM, Krohn S, Meyer H, Sinnwell V, Wilkes H, Francke W (1990) Metabolism of dibenzofuran by Pseudomonas sp. strain HH69 and the mixed culture HH27. Appl Environ Microbiol 56:1148-1156
-
(1990)
Appl Environ Microbiol
, vol.56
, pp. 1148-1156
-
-
Fortnagel, P.1
Harms, H.2
Wittich, R.M.3
Krohn, S.4
Meyer, H.5
Sinnwell, V.6
Wilkes, H.7
Francke, W.8
-
7
-
-
0037022975
-
Isolation and characterization of dibenzofuran-degrading bacteria
-
10.1111/j.1574-6968.2002.tb11079.x 1:CAS:528:DC%2BD38XivVagsb0%3D
-
Fukuda K, Nagata S, Taniguchi H (2002) Isolation and characterization of dibenzofuran-degrading bacteria. FEMS Microbiol Lett 208:179-185
-
(2002)
FEMS Microbiol Lett
, vol.208
, pp. 179-185
-
-
Fukuda, K.1
Nagata, S.2
Taniguchi, H.3
-
8
-
-
0035432248
-
Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by two types of bacteria having angular dioxygenases with different features
-
10.1128/AEM.67.8.3610-3617.2001 1:CAS:528:DC%2BD3MXlvFSlu7c%3D
-
Habe H, Chung JS, Lee JH, Kasuga K, Yoshida T, Nojiri H, Omori T (2001) Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by two types of bacteria having angular dioxygenases with different features. Appl Environ Microbiol 67:3610-3617
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 3610-3617
-
-
Habe, H.1
Chung, J.S.2
Lee, J.H.3
Kasuga, K.4
Yoshida, T.5
Nojiri, H.6
Omori, T.7
-
9
-
-
0001888461
-
Biodegradation of dioxin-related compounds: A review
-
10.1080/10889869709351314 1:CAS:528:DyaK2sXktlWmtbk%3D
-
Halden RU, Dwyer DF (1997) Biodegradation of dioxin-related compounds: a review. Bioremediation J 1:11-25
-
(1997)
Bioremediation J
, vol.1
, pp. 11-25
-
-
Halden, R.U.1
Dwyer, D.F.2
-
10
-
-
0036245012
-
Biotransformation of 2, 7-dichloro-and 1, 2, 3, 4-tetrachlorodibenzo-p- dioxin by Sphingomonas wittichii RW1
-
10.1128/AEM.68.5.2584-2588.2002 1:CAS:528:DC%2BD38XjsFGqu78%3D
-
Hong HB, Chang YS, Nam IH, Fortnagel P, Schmidt S (2002) Biotransformation of 2, 7-dichloro-and 1, 2, 3, 4-tetrachlorodibenzo-p-dioxin by Sphingomonas wittichii RW1. Appl Environ Microbiol 68:2584-2588
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 2584-2588
-
-
Hong, H.B.1
Chang, Y.S.2
Nam, I.H.3
Fortnagel, P.4
Schmidt, S.5
-
12
-
-
0036324296
-
Plasmid-borne genes code for an angular dioxygenase involved in dibenzofuran degradation by Terrabacter sp. strain YK3
-
10.1128/AEM.68.8.3716-3723.2002 1:CAS:528:DC%2BD38XmtVaqtb0%3D
-
Iida T, Mukouzaka Y, Nakamura K, Kudo T (2002) Plasmid-borne genes code for an angular dioxygenase involved in dibenzofuran degradation by Terrabacter sp. strain YK3. Appl Environ Microbiol 68:3716-3723
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 3716-3723
-
-
Iida, T.1
Mukouzaka, Y.2
Nakamura, K.3
Kudo, T.4
-
13
-
-
58149495973
-
The GAF-like-domain-containing transcriptional regulator DfdR is a sensor protein for dibenzofuran and several hydrophobic aromatic compounds
-
10.1128/JB.01112-08 1:CAS:528:DC%2BD1MXoslCiu7g%3D
-
Iida T, Waki T, Nakamura K, Mukouzaka Y, Kudo T (2009) The GAF-like-domain-containing transcriptional regulator DfdR is a sensor protein for dibenzofuran and several hydrophobic aromatic compounds. J Bacteriol 191:123-134
-
(2009)
J Bacteriol
, vol.191
, pp. 123-134
-
-
Iida, T.1
Waki, T.2
Nakamura, K.3
Mukouzaka, Y.4
Kudo, T.5
-
14
-
-
33746400069
-
Biodegradation of Dibenzofuran by Janibacter terrae strain XJ-1
-
10.1007/s00284-005-0180-1 1:CAS:528:DC%2BD28XlvVSqu7o%3D
-
Jin S, Zhu T, Xu X, Xu Y (2006) Biodegradation of Dibenzofuran by Janibacter terrae strain XJ-1. Curr Microbiol 53:30-36
-
(2006)
Curr Microbiol
, vol.53
, pp. 30-36
-
-
Jin, S.1
Zhu, T.2
Xu, X.3
Xu, Y.4
-
15
-
-
0031284266
-
Cloning and characterization of the genes involved in the degradation of dibenzofuran by Terrabacter sp. strain DBF63
-
10.1016/S0922-338X(97)81997-6 1:CAS:528:DyaK2sXnvFCnur4%3D
-
Kasuga K, Nojiri H, Yamane H, Kodama T, Omori T (1997) Cloning and characterization of the genes involved in the degradation of dibenzofuran by Terrabacter sp. strain DBF63. J Ferment Bioeng 84:387-399
-
(1997)
J Ferment Bioeng
, vol.84
, pp. 387-399
-
-
Kasuga, K.1
Nojiri, H.2
Yamane, H.3
Kodama, T.4
Omori, T.5
-
16
-
-
0034799210
-
Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63
-
10.1006/bbrc.2001.4763 1:CAS:528:DC%2BD3MXivFGhu7s%3D
-
Kasuga K, Habe H, Chung JS, Yoshida T, Nojiri H, Yamane H, Omori T (2001) Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63. Biochem Biophys Res Commun 283:195-204
-
(2001)
Biochem Biophys Res Commun
, vol.283
, pp. 195-204
-
-
Kasuga, K.1
Habe, H.2
Chung, J.S.3
Yoshida, T.4
Nojiri, H.5
Yamane, H.6
Omori, T.7
-
17
-
-
0033384266
-
Catabolism of 2, 7-dichloro-and 2, 4, 8-trichlorodibenzofuran by Sphingomonas sp strain RW1
-
10.1038/sj.jim.2900739 1:CAS:528:DyaK1MXotVKitrg%3D
-
Keim T, Francke W, Schmidt S, Fortnagel P (1999) Catabolism of 2, 7-dichloro-and 2, 4, 8-trichlorodibenzofuran by Sphingomonas sp strain RW1. J Ind Microbiol Biotechnol 23:359-363
-
(1999)
J Ind Microbiol Biotechnol
, vol.23
, pp. 359-363
-
-
Keim, T.1
Francke, W.2
Schmidt, S.3
Fortnagel, P.4
-
18
-
-
36549009124
-
Genetic and biochemical characterization of the dioxygenase involved in lateral dioxygenation of dibenzofuran from Rhodococcus opacus strain SAO101
-
10.1007/s00253-006-0481-8 1:CAS:528:DC%2BD28XhtlGiurrM
-
Kimura N, Kitagawa W, Mori T, Nakashima N, Tamura T, Kamagata Y (2006) Genetic and biochemical characterization of the dioxygenase involved in lateral dioxygenation of dibenzofuran from Rhodococcus opacus strain SAO101. Appl Microbiol Biotechnol 73:474-484
-
(2006)
Appl Microbiol Biotechnol
, vol.73
, pp. 474-484
-
-
Kimura, N.1
Kitagawa, W.2
Mori, T.3
Nakashima, N.4
Tamura, T.5
Kamagata, Y.6
-
20
-
-
33751512334
-
Degradation of carbazole and its derivatives by a Pseudomonas sp
-
10.1007/s00253-006-0530-3 1:CAS:528:DC%2BD28Xht1Gnu7jL
-
Li L, Li Q, Li F, Shi Q, Yu B, Liu F, Xu P (2006) Degradation of carbazole and its derivatives by a Pseudomonas sp. Appl Microbiol Biotechnol 73:941-948
-
(2006)
Appl Microbiol Biotechnol
, vol.73
, pp. 941-948
-
-
Li, L.1
Li, Q.2
Li, F.3
Shi, Q.4
Yu, B.5
Liu, F.6
Xu, P.7
-
21
-
-
33746191929
-
The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse
-
10.1073/pnas.0607048103
-
McLeod MP, Warren RL, Hsiao WW, Araki N, Myhre M, Fernandes C, Miyazawa D, Wong W, Lillquist AL, Wang D, Dosanjh M, Hara H, Petrescu A, Morin RD, Yang G, Stott JM, Schein JE, Shin H, Smailus D, Siddiqui AS, Marra MA, Jones SJ, Holt R, Brinkman FS, Miyauchi K, Fukuda M, Davies JE, Mohn WW, Eltis LD (2006) The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proc Natl Acad Sci U S A 103:15582-15587
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 15582-15587
-
-
McLeod, M.P.1
Warren, R.L.2
Hsiao, W.W.3
Araki, N.4
Myhre, M.5
Fernandes, C.6
Miyazawa, D.7
Wong, W.8
Lillquist, A.L.9
Wang, D.10
Dosanjh, M.11
Hara, H.12
Petrescu, A.13
Morin, R.D.14
Yang, G.15
Stott, J.M.16
Schein, J.E.17
Shin, H.18
Smailus, D.19
Siddiqui, A.S.20
Marra, M.A.21
Jones, S.J.22
Holt, R.23
Brinkman, F.S.24
Miyauchi, K.25
Fukuda, M.26
Davies, J.E.27
Mohn, W.W.28
Eltis, L.D.29
more..
-
22
-
-
0027396638
-
Microbial degradation of dibenzofuran, fluorene, and dibenzo-p-dioxin by Staphylococcus auriculans DBF63
-
1:CAS:528:DyaK3sXpslOktg%3D%3D
-
Monna L, Omori T, Kodama T (1993) Microbial degradation of dibenzofuran, fluorene, and dibenzo-p-dioxin by Staphylococcus auriculans DBF63. Appl Environ Microbiol 59:285-289
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 285-289
-
-
Monna, L.1
Omori, T.2
Kodama, T.3
-
23
-
-
13944256249
-
Crystal structure of the ferredoxin component of carbazole 1, 9a-dioxygenase of Pseudomonas resinovorans strain CA10, a novel Rieske non-heme iron oxygenase system
-
10.1002/prot.20374 1:CAS:528:DC%2BD2MXhs1Ogs70%3D
-
Nam JW, Noguchi H, Fujimoto Z, Mizuno H, Ashikawa Y, Abo M, Fushinobu S, Kobashi N, Wakagi T, Iwata K (2005) Crystal structure of the ferredoxin component of carbazole 1, 9a-dioxygenase of Pseudomonas resinovorans strain CA10, a novel Rieske non-heme iron oxygenase system. Proteins: Struct, Funct, Bioinforma 58:779-789
-
(2005)
Proteins: Struct, Funct, Bioinforma
, vol.58
, pp. 779-789
-
-
Nam, J.W.1
Noguchi, H.2
Fujimoto, Z.3
Mizuno, H.4
Ashikawa, Y.5
Abo, M.6
Fushinobu, S.7
Kobashi, N.8
Wakagi, T.9
Iwata, K.10
-
24
-
-
0036391913
-
Dioxin catabolic genes are dispersed on the Terrabacter sp. DBF63 genome
-
10.1016/S0006-291X(02)00873-2 1:CAS:528:DC%2BD38XlvF2gsbc%3D
-
Nojiri H, Kamakura M, Urata M, Tanaka T, Chung JS, Takemura T, Yoshida T, Habe H, Omori T (2002) Dioxin catabolic genes are dispersed on the Terrabacter sp. DBF63 genome. Biochem Biophys Res Commun 296:233-240
-
(2002)
Biochem Biophys Res Commun
, vol.296
, pp. 233-240
-
-
Nojiri, H.1
Kamakura, M.2
Urata, M.3
Tanaka, T.4
Chung, J.S.5
Takemura, T.6
Yoshida, T.7
Habe, H.8
Omori, T.9
-
25
-
-
0029842912
-
Regio-and stereospecific oxidation of fluorene, dibenzofuran, and dibenzothiophene by naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4
-
1:CAS:528:DyaK28Xms1Kiurk%3D
-
Resnick SM, Gibson DT (1996) Regio-and stereospecific oxidation of fluorene, dibenzofuran, and dibenzothiophene by naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4. Appl Environ Microbiol 62:4073-4080
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 4073-4080
-
-
Resnick, S.M.1
Gibson, D.T.2
-
27
-
-
33644854755
-
Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4
-
10.1111/j.1462-2920.2005.00899.x 1:CAS:528:DC%2BD28XisFWrs78%3D
-
Sekine M, Tanikawa S, Omata S, Saito M, Fujisawa T, Tsukatani N, Tajima T, Sekigawa T, Kosugi H, Matsuo Y (2006) Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4. Environ Microbiol 8:334-346
-
(2006)
Environ Microbiol
, vol.8
, pp. 334-346
-
-
Sekine, M.1
Tanikawa, S.2
Omata, S.3
Saito, M.4
Fujisawa, T.5
Tsukatani, N.6
Tajima, T.7
Sekigawa, T.8
Kosugi, H.9
Matsuo, Y.10
-
28
-
-
0035350114
-
Characterization of the 450-kb linear plasmid in a polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1
-
10.1128/AEM.67.5.2021-2028.2001 1:CAS:528:DC%2BD3MXjtlGntLg%3D
-
Shimizu S, Kobayashi H, Masai E, Fukuda M (2001) Characterization of the 450-kb linear plasmid in a polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1. Appl Environ Microbiol 67:2021-2028
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 2021-2028
-
-
Shimizu, S.1
Kobayashi, H.2
Masai, E.3
Fukuda, M.4
-
29
-
-
18844421873
-
Large plasmid pCAR2 and class II transposon Tn4676 are functional mobile genetic elements to distribute the carbazole/dioxin-degradative car gene cluster in different bacteria
-
10.1007/s00253-004-1778-0
-
Shintani M, Yoshida T, Habe H, Omori T, Nojiri H (2004) Large plasmid pCAR2 and class II transposon Tn4676 are functional mobile genetic elements to distribute the carbazole/dioxin-degradative car gene cluster in different bacteria. Appl Microbiol Biotechnol 67:370-382
-
(2004)
Appl Microbiol Biotechnol
, vol.67
, pp. 370-382
-
-
Shintani, M.1
Yoshida, T.2
Habe, H.3
Omori, T.4
Nojiri, H.5
-
30
-
-
0024511739
-
Enrichment of dibenzofuran utilizing bacteria with high co-metabolic potential towards dibenzodioxin and other anellated aromatics
-
10.1111/j.1574-6968.1989.tb03050.x 1:CAS:528:DyaL1MXhvV2it7s%3D
-
Strubel V, Rast H, Knackmuss HJ, Engesser K (1989) Enrichment of dibenzofuran utilizing bacteria with high co-metabolic potential towards dibenzodioxin and other anellated aromatics. FEMS Microbiol Lett 58:233-238
-
(1989)
FEMS Microbiol Lett
, vol.58
, pp. 233-238
-
-
Strubel, V.1
Rast, H.2
Knackmuss, H.J.3
Engesser, K.4
-
31
-
-
34547781750
-
MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
-
10.1093/molbev/msm092 1:CAS:528:DC%2BD2sXpsVGrsL8%3D
-
Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596-1599
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
32
-
-
0141654983
-
Perspectives on the formation of polychlorinated dibenzo-p-dioxins and dibenzofurans during municipal solid waste (MSW) incineration and other combustion processes
-
10.1021/ar020104+ 1:CAS:528:DC%2BD3sXjs1Wisrw%3D
-
Tuppurainen K, Asikainen A, Ruokojrvi P, Ruuskanen J (2003) Perspectives on the formation of polychlorinated dibenzo-p-dioxins and dibenzofurans during municipal solid waste (MSW) incineration and other combustion processes. Acc Chem Res 36:652-658
-
(2003)
Acc Chem Res
, vol.36
, pp. 652-658
-
-
Tuppurainen, K.1
Asikainen, A.2
Ruokojrvi, P.3
Ruuskanen, J.4
-
33
-
-
14844303549
-
The bphC gene-encoded 2,3-dihydroxybiphenyl-1,2-dioxygenase is involved in complete degradation of dibenzofuran by the biphenyl-degrading bacterium Ralstonia sp. SBUG 290
-
10.1111/j.1365-2672.2004.02489.x 1:CAS:528:DC%2BD2MXltlWisrg%3D
-
Wesche J, Hammer E, Becher D, Burchhardt G, Schauer F (2005) The bphC gene-encoded 2,3-dihydroxybiphenyl-1,2-dioxygenase is involved in complete degradation of dibenzofuran by the biphenyl-degrading bacterium Ralstonia sp. SBUG 290. J Appl Microbiol 98:635-645
-
(2005)
J Appl Microbiol
, vol.98
, pp. 635-645
-
-
Wesche, J.1
Hammer, E.2
Becher, D.3
Burchhardt, G.4
Schauer, F.5
-
34
-
-
0030049788
-
Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by Sphingomonas sp. strain RW1
-
1:CAS:528:DyaK28XovVCnuw%3D%3D
-
Wilkes H, Wittich R, Timmis KN, Fortnagel P, Francke W (1996) Degradation of chlorinated dibenzofurans and dibenzo-p-dioxins by Sphingomonas sp. strain RW1. Appl Environ Microbiol 62:367-371
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 367-371
-
-
Wilkes, H.1
Wittich, R.2
Timmis, K.N.3
Fortnagel, P.4
Francke, W.5
-
35
-
-
0031804925
-
Degradation of dioxin-like compounds by microorganisms
-
10.1007/s002530051203 1:CAS:528:DyaK1cXkt1Klsbs%3D
-
Wittich RM (1998) Degradation of dioxin-like compounds by microorganisms. Appl Microbiol Biotechnol 49:489-499
-
(1998)
Appl Microbiol Biotechnol
, vol.49
, pp. 489-499
-
-
Wittich, R.M.1
-
36
-
-
4043097851
-
Degradation of polycyclic aromatic hydrocarbons by a newly isolated dibenzofuran-utilizing Janibacter sp. strain YY-1
-
10.1007/s00253-003-1541-y 1:CAS:528:DC%2BD2cXmt1Kltb0%3D
-
Yamazoe A, Yagi O, Oyaizu H (2004) Degradation of polycyclic aromatic hydrocarbons by a newly isolated dibenzofuran-utilizing Janibacter sp. strain YY-1. Appl Microbiol Biotechnol 65:211-218
-
(2004)
Appl Microbiol Biotechnol
, vol.65
, pp. 211-218
-
-
Yamazoe, A.1
Yagi, O.2
Oyaizu, H.3
|