-
1
-
-
4944261797
-
Mammalian cell-entry proteins encoded by the mce3 operon of Mycobacterium tuberculosis are expressed during natural infection in humans
-
Ahmad, S., S. El-Shazly, A. S. Mustafa, and R. Al-Attiyah. 2004. Mammalian cell-entry proteins encoded by the mce3 operon of Mycobacterium tuberculosis are expressed during natural infection in humans. Scand. J. Immunol. 60:382-391.
-
(2004)
Scand. J. Immunol
, vol.60
, pp. 382-391
-
-
Ahmad, S.1
El-Shazly, S.2
Mustafa, A.S.3
Al-Attiyah, R.4
-
2
-
-
22644435472
-
The six mammalian cell entry proteins (Mce3A-F) encoded by the mce3 operon are expressed during in vitro growth of Mycobacterium tuberculosis
-
Ahmad, S., S. El-Shazly, A. S. Mustafa, and R. Al-Attiyah. 2005. The six mammalian cell entry proteins (Mce3A-F) encoded by the mce3 operon are expressed during in vitro growth of Mycobacterium tuberculosis. Scand. J. Immunol. 62:16-24.
-
(2005)
Scand. J. Immunol
, vol.62
, pp. 16-24
-
-
Ahmad, S.1
El-Shazly, S.2
Mustafa, A.S.3
Al-Attiyah, R.4
-
3
-
-
45749095936
-
Two angular dioxygenases contribute to the metabolic versatility of dibenzofuran-degrading Rhodococcus sp. strain HA01
-
Aly, H. A., N. B. Huu, V. Wray, H. Junca, and D. H. Pieper. 2008. Two angular dioxygenases contribute to the metabolic versatility of dibenzofuran-degrading Rhodococcus sp. strain HA01. Appl. Environ. Microbiol. 74:3812-3822.
-
(2008)
Appl. Environ. Microbiol
, vol.74
, pp. 3812-3822
-
-
Aly, H.A.1
Huu, N.B.2
Wray, V.3
Junca, H.4
Pieper, D.H.5
-
4
-
-
0032444534
-
Two sets of biphenyl and PCB degradation genes on a linear plasmid in Rhodococcus erythropolis TA421
-
Arai, H., S. Kosono, K. Taguchi, M. Maeda, E. Song, F. Fuji, S.-Y. Chung, and T. Kudo. 1998. Two sets of biphenyl and PCB degradation genes on a linear plasmid in Rhodococcus erythropolis TA421. J. Ferment. Bioeng. 86: 595-599.
-
(1998)
J. Ferment. Bioeng
, vol.86
, pp. 595-599
-
-
Arai, H.1
Kosono, S.2
Taguchi, K.3
Maeda, M.4
Song, E.5
Fuji, F.6
Chung, S.-Y.7
Kudo, T.8
-
5
-
-
0034127014
-
A second [2Fe-2S] ferredoxin from Sphingomonas sp. strain RW1 can function as an electron donor for the dioxin dioxygenase
-
Armengaud, J., J. Gaillard, and K. N. Timmis. 2000. A second [2Fe-2S] ferredoxin from Sphingomonas sp. strain RW1 can function as an electron donor for the dioxin dioxygenase. J. Bacteriol. 182:2238-2244.
-
(2000)
J. Bacteriol
, vol.182
, pp. 2238-2244
-
-
Armengaud, J.1
Gaillard, J.2
Timmis, K.N.3
-
6
-
-
0031859323
-
Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: Catabolic genes dispersed on the genome
-
Armengaud, J., B. Happe, and K. N. Timmis. 1998. Genetic analysis of dioxin dioxygenase of Sphingomonas sp. strain RW1: catabolic genes dispersed on the genome. J. Bacteriol. 180:3954-3966.
-
(1998)
J. Bacteriol
, vol.180
, pp. 3954-3966
-
-
Armengaud, J.1
Happe, B.2
Timmis, K.N.3
-
7
-
-
0030789487
-
Molecular characterization of Fdx1, a putidaredoxin-type [2Fe-2S] ferredoxin able to transfer electrons to the dioxin dioxygenase of Sphingomonas sp. RW1
-
Armengaud, J., and K. N. Timmis. 1997. Molecular characterization of Fdx1, a putidaredoxin-type [2Fe-2S] ferredoxin able to transfer electrons to the dioxin dioxygenase of Sphingomonas sp. RW1. Eur. J. Biochem. 247:833-842.
-
(1997)
Eur. J. Biochem
, vol.247
, pp. 833-842
-
-
Armengaud, J.1
Timmis, K.N.2
-
8
-
-
0032522534
-
The reductase RedA2 of the multi-component dioxin dioxygenase system of Sphingomonas sp. RW1 is related to class-I cytochrome P450-type reductases
-
Armengaud, J., and K. N. Timmis. 1998. The reductase RedA2 of the multi-component dioxin dioxygenase system of Sphingomonas sp. RW1 is related to class-I cytochrome P450-type reductases. Eur. J. Biochem. 253: 437-444.
-
(1998)
Eur. J. Biochem
, vol.253
, pp. 437-444
-
-
Armengaud, J.1
Timmis, K.N.2
-
9
-
-
0027424110
-
Cloning of an M. tuberculosis DNA fragment associated with entry and survival inside cells
-
Arruda, S., G. Bomfim, R. Knights, T. Huima-Byron, and L. W. Riley. 1993. Cloning of an M. tuberculosis DNA fragment associated with entry and survival inside cells. Science 261:1454-1457.
-
(1993)
Science
, vol.261
, pp. 1454-1457
-
-
Arruda, S.1
Bomfim, G.2
Knights, R.3
Huima-Byron, T.4
Riley, L.W.5
-
10
-
-
33845545777
-
Functional identification of p-cumate operons in the terpene-degrading Rhodococcus sp. strain T104
-
Bae, H. W., D. Kim, K. Y. Choi, N. R. Kwon, J. C. Chae, G. J. Zylstra, S. C. Koh, C. H. Lee, and E. Kim. 2007. Functional identification of p-cumate operons in the terpene-degrading Rhodococcus sp. strain T104. FEMS Microbiol. Lett. 266:54-59.
-
(2007)
FEMS Microbiol. Lett
, vol.266
, pp. 54-59
-
-
Bae, H.W.1
Kim, D.2
Choi, K.Y.3
Kwon, N.R.4
Chae, J.C.5
Zylstra, G.J.6
Koh, S.C.7
Lee, C.H.8
Kim, E.9
-
11
-
-
0027484182
-
Dibenzofuran 4,4a-dioxygenase from Sphingomonas sp. strain RW1: Angular dioxygenation by a three-component enzyme system
-
Bunz, P. V., and A. M. Cook. 1993. Dibenzofuran 4,4a-dioxygenase from Sphingomonas sp. strain RW1: angular dioxygenation by a three-component enzyme system. J. Bacteriol. 175:6467-6475.
-
(1993)
J. Bacteriol
, vol.175
, pp. 6467-6475
-
-
Bunz, P.V.1
Cook, A.M.2
-
12
-
-
26944499456
-
A non-haem iron centre in the transcription factor NorR senses nitric oxide
-
D'Autreaux, B., N. P. Tucker, R. Dixon, and S. Spiro. 2005. A non-haem iron centre in the transcription factor NorR senses nitric oxide. Nature 437:769-772.
-
(2005)
Nature
, vol.437
, pp. 769-772
-
-
D'Autreaux, B.1
Tucker, N.P.2
Dixon, R.3
Spiro, S.4
-
13
-
-
0025036002
-
Transformation of Rhodococcus fascians by high-voltage electroporation and development of R. fascians cloning vectors
-
Desomer, J., P. Dhaese, and M. V. Montagu. 1990. Transformation of Rhodococcus fascians by high-voltage electroporation and development of R. fascians cloning vectors. Appl. Environ. Microbiol. 56:2818-2825.
-
(1990)
Appl. Environ. Microbiol
, vol.56
, pp. 2818-2825
-
-
Desomer, J.1
Dhaese, P.2
Montagu, M.V.3
-
14
-
-
33644876020
-
Pfam: Clans, web tools and services
-
Finn, R. D., J. Mistry, B. Schuster-Bockler, S. Griffiths-Jones, V. Hollich, T. Lassmann, S. Moxon, M. Marshall, A. Khanna, R. Durbin, S. R. Eddy, E. L. Sonnhammer, and A. Bateman. 2006. Pfam: clans, web tools and services. Nucleic Acids Res. 34:D247-D251.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Finn, R.D.1
Mistry, J.2
Schuster-Bockler, B.3
Griffiths-Jones, S.4
Hollich, V.5
Lassmann, T.6
Moxon, S.7
Marshall, M.8
Khanna, A.9
Durbin, R.10
Eddy, S.R.11
Sonnhammer, E.L.12
Bateman, A.13
-
15
-
-
20944450757
-
Mutation in mce operons attenuates Mycobacterium tuberculosis virulence
-
Gioffre, A., E. Infante, D. Aguilar, M. P. Santangelo, L. Klepp, A. Amadio, V. Meikle, I. Etchechoury, M. I. Romano, A. Cataldi, R. P. Hernandez, and F. Bigi. 2005. Mutation in mce operons attenuates Mycobacterium tuberculosis virulence. Microbes Infect. 7:325-734.
-
(2005)
Microbes Infect
, vol.7
, pp. 325-734
-
-
Gioffre, A.1
Infante, E.2
Aguilar, D.3
Santangelo, M.P.4
Klepp, L.5
Amadio, A.6
Meikle, V.7
Etchechoury, I.8
Romano, M.I.9
Cataldi, A.10
Hernandez, R.P.11
Bigi, F.12
-
16
-
-
0037361704
-
Phthalate catabolic gene cluster is linked to the angular dioxygenase gene in Terrabacter sp. strain DBF63
-
Habe, H., M. Miyakoshi, J. Chung, K. Kasuga, T. Yoshida, H. Nojiri, and T. Omori. 2003. Phthalate catabolic gene cluster is linked to the angular dioxygenase gene in Terrabacter sp. strain DBF63. Appl. Microbiol. Biotechnol. 61:44-54.
-
(2003)
Appl. Microbiol. Biotechnol
, vol.61
, pp. 44-54
-
-
Habe, H.1
Miyakoshi, M.2
Chung, J.3
Kasuga, K.4
Yoshida, T.5
Nojiri, H.6
Omori, T.7
-
17
-
-
0029044907
-
Effector-mediated stimulation of ATPase activity by the sigma 54-dependent transcriptional activator FHLA from Escherichia coli
-
Hopper, S., and A. Bock. 1995. Effector-mediated stimulation of ATPase activity by the sigma 54-dependent transcriptional activator FHLA from Escherichia coli. J. Bacteriol. 177:2798-2803.
-
(1995)
J. Bacteriol
, vol.177
, pp. 2798-2803
-
-
Hopper, S.1
Bock, A.2
-
18
-
-
0025898907
-
In vivo interactions of the NahR transcriptional activator with its target sequences. Inducer-mediated changes resulting in transcription activation
-
Huang, J. Z., and M. A. Schell. 1991. In vivo interactions of the NahR transcriptional activator with its target sequences. Inducer-mediated changes resulting in transcription activation. J. Biol. Chem. 266:10830-10838.
-
(1991)
J. Biol. Chem
, vol.266
, pp. 10830-10838
-
-
Huang, J.Z.1
Schell, M.A.2
-
19
-
-
16844377790
-
GAF domains: Cyclic nucleotides come full circle
-
Hurley, J. H. 2003. GAF domains: cyclic nucleotides come full circle. Sci. STKE 2003:PE1.
-
(2003)
Sci. STKE
, vol.2003
-
-
Hurley, J.H.1
-
20
-
-
0036324296
-
Plasmid-borne genes code for an angular dioxygenase involved in dibenzofuran degradation by Terrabacter sp. strain YK3
-
Iida, T., Y. Mukouzaka, K. Nakamura, and T. Kudo. 2002. Plasmid-borne genes code for an angular dioxygenase involved in dibenzofuran degradation by Terrabacter sp. strain YK3. Appl. Environ. Microbiol. 68:3716-3723.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 3716-3723
-
-
Iida, T.1
Mukouzaka, Y.2
Nakamura, K.3
Kudo, T.4
-
21
-
-
0036654304
-
Isolation and characterization of dibenzofuran-degrading actinomycetes: Analysis of multiple extradiol dioxygenase genes in dibenzofuran-degrading Rhodococcus species
-
Iida, T., Y. Mukouzaka, K. Nakamura, I. Yamaguchi, and T. Kudo. 2002. Isolation and characterization of dibenzofuran-degrading actinomycetes: analysis of multiple extradiol dioxygenase genes in dibenzofuran-degrading Rhodococcus species. Biosci. Biotechnol. Biochem. 66:1462-1472.
-
(2002)
Biosci. Biotechnol. Biochem
, vol.66
, pp. 1462-1472
-
-
Iida, T.1
Mukouzaka, Y.2
Nakamura, K.3
Yamaguchi, I.4
Kudo, T.5
-
22
-
-
29144441363
-
Isolation and characterization of a gene cluster for dibenzofuran degradation in a new dibenzofuran-utilizing bacterium, Paenibacillus sp. strain YK5
-
Iida, T., K. Nakamura, A. Izumi, Y. Mukouzaka, and T. Kudo. 2006. Isolation and characterization of a gene cluster for dibenzofuran degradation in a new dibenzofuran-utilizing bacterium, Paenibacillus sp. strain YK5. Arch. Microbiol. 184:305-315.
-
(2006)
Arch. Microbiol
, vol.184
, pp. 305-315
-
-
Iida, T.1
Nakamura, K.2
Izumi, A.3
Mukouzaka, Y.4
Kudo, T.5
-
23
-
-
0033986392
-
HbpR, a new member of the XylR/DmpR subclass within the NtrC family of bacterial transcriptional activators, regulates expression of 2-hydroxybiphenyl metabolism in Pseudomonas azelaica HBP1
-
Jaspers, M. C., W. A. Suske, A. Schmid, D. A. Goslings, H. P. Kohler, and J. R. van der Meer. 2000. HbpR, a new member of the XylR/DmpR subclass within the NtrC family of bacterial transcriptional activators, regulates expression of 2-hydroxybiphenyl metabolism in Pseudomonas azelaica HBP1. J. Bacteriol. 182:405-417.
-
(2000)
J. Bacteriol
, vol.182
, pp. 405-417
-
-
Jaspers, M.C.1
Suske, W.A.2
Schmid, A.3
Goslings, D.A.4
Kohler, H.P.5
van der Meer, J.R.6
-
24
-
-
33746791191
-
Characterization of mycobacterial virulence genes through genetic interaction mapping
-
Joshi, S. M., A. K. Pandey, N. Capite, S. M. Fortune, E. J. Rubin, and C. M. Sassetti. 2006. Characterization of mycobacterial virulence genes through genetic interaction mapping. Proc. Natl. Acad. Sci. USA 103:11760-11765.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 11760-11765
-
-
Joshi, S.M.1
Pandey, A.K.2
Capite, N.3
Fortune, S.M.4
Rubin, E.J.5
Sassetti, C.M.6
-
25
-
-
0034799210
-
Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63
-
Kasuga, K., H. Habe, J. S. Chung, T. Yoshida, H. Nojiri, H. Yamane, and T. Omori. 2001. Isolation and characterization of the genes encoding a novel oxygenase component of angular dioxygenase from the gram-positive dibenzofuran-degrader Terrabacter sp. strain DBF63. Biochem. Biophys. Res. Commun. 283:195-204.
-
(2001)
Biochem. Biophys. Res. Commun
, vol.283
, pp. 195-204
-
-
Kasuga, K.1
Habe, H.2
Chung, J.S.3
Yoshida, T.4
Nojiri, H.5
Yamane, H.6
Omori, T.7
-
26
-
-
0030986983
-
Characterization of the genes encoding a receptor-like histidine kinase and a cognate response regulator from a biphenyl/polychlorobiphenyl-degrading bacterium, Rhodococcus sp. strain M5
-
Labbe, D., J. Garnon, and P. C. Lau. 1997. Characterization of the genes encoding a receptor-like histidine kinase and a cognate response regulator from a biphenyl/polychlorobiphenyl-degrading bacterium, Rhodococcus sp. strain M5. J. Bacteriol. 179:2772-2776.
-
(1997)
J. Bacteriol
, vol.179
, pp. 2772-2776
-
-
Labbe, D.1
Garnon, J.2
Lau, P.C.3
-
27
-
-
0031038354
-
A bacterial basic region leucine zipper histidine kinase regulating toluene degradation
-
Lau, P. C., Y. Wang, A. Patel, D. Labbe, H. Bergeron, R. Brousseau, Y. Konishi, and M. Rawlings. 1997. A bacterial basic region leucine zipper histidine kinase regulating toluene degradation. Proc. Natl. Acad. Sci. USA 94:1453-1458.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 1453-1458
-
-
Lau, P.C.1
Wang, Y.2
Patel, A.3
Labbe, D.4
Bergeron, H.5
Brousseau, R.6
Konishi, Y.7
Rawlings, M.8
-
28
-
-
33644877451
-
SMART 5: Domains in the context of genomes and networks
-
Letunic, I., R. R. Copley, B. Pils, S. Pinkert, J. Schultz, and P. Bork. 2006. SMART 5: domains in the context of genomes and networks. Nucleic Acids Res. 34:D257-D260.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Letunic, I.1
Copley, R.R.2
Pils, B.3
Pinkert, S.4
Schultz, J.5
Bork, P.6
-
29
-
-
0043209062
-
The amino-terminal GAF domain of Azotobacter vinelandii NifA binds 2-oxoglutarate to resist inhibition by NifL under nitrogen-limiting conditions
-
Little, R., and R. Dixon. 2003. The amino-terminal GAF domain of Azotobacter vinelandii NifA binds 2-oxoglutarate to resist inhibition by NifL under nitrogen-limiting conditions. J. Biol. Chem. 278:28711-28718.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 28711-28718
-
-
Little, R.1
Dixon, R.2
-
30
-
-
1642554150
-
GAF domains: Two-billion-year-old molecular switches that bind cyclic nucleotides
-
Martinez, S. E., J. A. Beavo, and W. G. Hol. 2002. GAF domains: two-billion-year-old molecular switches that bind cyclic nucleotides. Mol. Interv. 2:317-323.
-
(2002)
Mol. Interv
, vol.2
, pp. 317-323
-
-
Martinez, S.E.1
Beavo, J.A.2
Hol, W.G.3
-
31
-
-
33845640610
-
Stimulus perception in bacterial signal-transducing histidine kinases
-
Mascher, T., J. D. Helmann, and G. Unden. 2006. Stimulus perception in bacterial signal-transducing histidine kinases. Microbiol. Mol. Biol. Rev. 70:910-938.
-
(2006)
Microbiol. Mol. Biol. Rev
, vol.70
, pp. 910-938
-
-
Mascher, T.1
Helmann, J.D.2
Unden, G.3
-
32
-
-
33646587183
-
Differentiation of carbazole catabolic operons by replacement of the regulated promoter via transposition of an insertion sequence
-
Miyakoshi, M., M. Urata, H. Habe, T. Omori, H. Yamane, and H. Nojiri. 2006. Differentiation of carbazole catabolic operons by replacement of the regulated promoter via transposition of an insertion sequence. J. Biol. Chem. 281:8450-8457.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 8450-8457
-
-
Miyakoshi, M.1
Urata, M.2
Habe, H.3
Omori, T.4
Yamane, H.5
Nojiri, H.6
-
33
-
-
47149114402
-
Isolation of dibenzofuran-degrading bacterium, Nocardioides sp. DF412, and characterization of its dibenzofuran degradation genes
-
Miyauchi, K., P. Sukda, T. Nishida, E. Ito, Y. Matsumoto, E. Masai, and M. Fukuda. 2008. Isolation of dibenzofuran-degrading bacterium, Nocardioides sp. DF412, and characterization of its dibenzofuran degradation genes. J. Biosci. Bioeng. 105:628-635.
-
(2008)
J. Biosci. Bioeng
, vol.105
, pp. 628-635
-
-
Miyauchi, K.1
Sukda, P.2
Nishida, T.3
Ito, E.4
Matsumoto, Y.5
Masai, E.6
Fukuda, M.7
-
34
-
-
0027396638
-
Microbial degradation of dibenzofuran, fluorene, and dibenzo-p-dioxin by Staphylococcus auriculans DBF63
-
Monna, L., T. Omori, and T. Kodama. 1993. Microbial degradation of dibenzofuran, fluorene, and dibenzo-p-dioxin by Staphylococcus auriculans DBF63. Appl. Environ. Microbiol. 59:285-289.
-
(1993)
Appl. Environ. Microbiol
, vol.59
, pp. 285-289
-
-
Monna, L.1
Omori, T.2
Kodama, T.3
-
35
-
-
0035729093
-
Bacterial degradation of aromatic compounds via angular dioxygenation
-
Nojiri, H., H. Habe, and T. Omori. 2001. Bacterial degradation of aromatic compounds via angular dioxygenation. J. Gen. Appl. Microbiol. 47:279-305.
-
(2001)
J. Gen. Appl. Microbiol
, vol.47
, pp. 279-305
-
-
Nojiri, H.1
Habe, H.2
Omori, T.3
-
36
-
-
0036391913
-
Dioxin catabolic genes are dispersed on the Terrabacter sp. DBF63 genome
-
Nojiri, H., M. Kamakura, M. Urata, T. Tanaka, J. S. Chung, T. Takemura, T. Yoshida, H. Habe, and T. Omori. 2002. Dioxin catabolic genes are dispersed on the Terrabacter sp. DBF63 genome. Biochem. Biophys. Res. Commun. 296:233-240.
-
(2002)
Biochem. Biophys. Res. Commun
, vol.296
, pp. 233-240
-
-
Nojiri, H.1
Kamakura, M.2
Urata, M.3
Tanaka, T.4
Chung, J.S.5
Takemura, T.6
Yoshida, T.7
Habe, H.8
Omori, T.9
-
37
-
-
0035965274
-
BphS, a key transcriptional regulator of bph genes involved in polychlorinated biphenyl/biphenyl degradation in Pseudomonas sp. KKS102
-
Ohtsubo, Y., M. Delawary, K. Kimbara, M. Takagi, A. Ohta, and Y. Nagata. 2001. BphS, a key transcriptional regulator of bph genes involved in polychlorinated biphenyl/biphenyl degradation in Pseudomonas sp. KKS102. J. Biol. Chem. 276:36146-36154.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 36146-36154
-
-
Ohtsubo, Y.1
Delawary, M.2
Kimbara, K.3
Takagi, M.4
Ohta, A.5
Nagata, Y.6
-
38
-
-
0037022971
-
Induction and repression of the sty operon in Pseudomonas putida CA-3 during growth on phenylacetic acid under organic and inorganic nutrient-limiting continuous culture conditions
-
O'Leary, N. D., W. A. Duetz, A. D. Dobson, and K. E. O'Connor. 2002. Induction and repression of the sty operon in Pseudomonas putida CA-3 during growth on phenylacetic acid under organic and inorganic nutrient-limiting continuous culture conditions. FEMS Microbiol. Lett. 208:263-268.
-
(2002)
FEMS Microbiol. Lett
, vol.208
, pp. 263-268
-
-
O'Leary, N.D.1
Duetz, W.A.2
Dobson, A.D.3
O'Connor, K.E.4
-
39
-
-
0030860391
-
Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators
-
Ramos, J. L., S. Marques, and K. N. Timmis. 1997. Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators. Annu. Rev. Microbiol. 51:341-373.
-
(1997)
Annu. Rev. Microbiol
, vol.51
, pp. 341-373
-
-
Ramos, J.L.1
Marques, S.2
Timmis, K.N.3
-
40
-
-
20444419421
-
Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages
-
Rengarajan, J., B. R. Bloom, and E. J. Rubin. 2005. Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages. Proc. Natl. Acad. Sci. USA 102:8327-8332.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 8327-8332
-
-
Rengarajan, J.1
Bloom, B.R.2
Rubin, E.J.3
-
41
-
-
41549104964
-
Study of the role of Mce3R on the transcription of mce genes of Mycobacterium tuberculosis
-
Santangelo, M. P., F. C. Blanco, M. V. Bianco, L. I. Klepp, O. Zabal, A. A. Cataldi, and F. Bigi. 2008. Study of the role of Mce3R on the transcription of mce genes of Mycobacterium tuberculosis. BMC Microbiol. 8:38.
-
(2008)
BMC Microbiol
, vol.8
, pp. 38
-
-
Santangelo, M.P.1
Blanco, F.C.2
Bianco, M.V.3
Klepp, L.I.4
Zabal, O.5
Cataldi, A.A.6
Bigi, F.7
-
42
-
-
0036773776
-
Negative transcriptional regulation of the mce3 operon in Mycobacterium tuberculosis
-
Santangelo, M. P., J. Goldstein, A. Alito, A. Gioffre, K. Caimi, O. Zabal, M. Zumarraga, M. I. Romano, A. A. Cataldi, and F. Bigi. 2002. Negative transcriptional regulation of the mce3 operon in Mycobacterium tuberculosis. Microbiology 148:2997-3006.
-
(2002)
Microbiology
, vol.148
, pp. 2997-3006
-
-
Santangelo, M.P.1
Goldstein, J.2
Alito, A.3
Gioffre, A.4
Caimi, K.5
Zabal, O.6
Zumarraga, M.7
Romano, M.I.8
Cataldi, A.A.9
Bigi, F.10
-
43
-
-
27144485413
-
A GAF domain in the hypoxia/NO-inducible Mycobacterium tuberculosis DosS protein binds haem
-
Sardiwal, S., S. L. Kendall, F. Movahedzadeh, S. C. Rison, N. G. Stoker, and S. Djordjevic. 2005. A GAF domain in the hypoxia/NO-inducible Mycobacterium tuberculosis DosS protein binds haem. J. Mol. Biol. 353:929-936.
-
(2005)
J. Mol. Biol
, vol.353
, pp. 929-936
-
-
Sardiwal, S.1
Kendall, S.L.2
Movahedzadeh, F.3
Rison, S.C.4
Stoker, N.G.5
Djordjevic, S.6
-
44
-
-
0031020094
-
Characterization of three distinct extradiol dioxygenases involved in mineralization of dibenzofuran by Terrabacter sp. strain DPO360
-
Schmid, A., B. Rothe, J. Altenbuchner, W. Ludwig, and K. H. Engesser. 1997. Characterization of three distinct extradiol dioxygenases involved in mineralization of dibenzofuran by Terrabacter sp. strain DPO360. J. Bacteriol. 179:53-62.
-
(1997)
J. Bacteriol
, vol.179
, pp. 53-62
-
-
Schmid, A.1
Rothe, B.2
Altenbuchner, J.3
Ludwig, W.4
Engesser, K.H.5
-
45
-
-
38949205260
-
Mycobacterium tuberculosis strains disrupted in mce3 and mce4 operons are attenuated in mice
-
Senaratne, R. H., B. Sidders, P. Sequeira, G. Saunders, K. Dunphy, O. Marjanovic, J. R. Reader, P. Lima, S. Chan, S. Kendall, J. McFadden, and L. W. Riley. 2008. Mycobacterium tuberculosis strains disrupted in mce3 and mce4 operons are attenuated in mice. J. Med. Microbiol. 57:164-170.
-
(2008)
J. Med. Microbiol
, vol.57
, pp. 164-170
-
-
Senaratne, R.H.1
Sidders, B.2
Sequeira, P.3
Saunders, G.4
Dunphy, K.5
Marjanovic, O.6
Reader, J.R.7
Lima, P.8
Chan, S.9
Kendall, S.10
McFadden, J.11
Riley, L.W.12
-
46
-
-
0027400541
-
Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activators
-
Shingler, V., M. Bartilson, and T. Moore. 1993. Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activators. J. Bacteriol. 175:1596-1604.
-
(1993)
J. Bacteriol
, vol.175
, pp. 1596-1604
-
-
Shingler, V.1
Bartilson, M.2
Moore, T.3
-
47
-
-
0036174570
-
54-dependent systems: A common phenotype by different mechanisms
-
54-dependent systems: a common phenotype by different mechanisms. J. Bacteriol. 184:760-770.
-
(2002)
J. Bacteriol
, vol.184
, pp. 760-770
-
-
Sze, C.C.1
Bernardo, L.M.2
Shingler, V.3
-
48
-
-
1642370443
-
Characterization of transcriptional regulatory genes for biphenyl degradation in Rhodococcus sp. strain RHA1
-
Takeda, H., A. Yamada, K. Miyauchi, E. Masai, and M. Fukuda. 2004. Characterization of transcriptional regulatory genes for biphenyl degradation in Rhodococcus sp. strain RHA1. J. Bacteriol. 186:2134-2146.
-
(2004)
J. Bacteriol
, vol.186
, pp. 2134-2146
-
-
Takeda, H.1
Yamada, A.2
Miyauchi, K.3
Masai, E.4
Fukuda, M.5
-
49
-
-
4544275675
-
Bacterial transcriptional regulators for degradation pathways of aromatic compounds
-
Tropel, D., and J. R. van der Meer. 2004. Bacterial transcriptional regulators for degradation pathways of aromatic compounds. Microbiol. Mol. Biol. Rev. 68:474-500.
-
(2004)
Microbiol. Mol. Biol. Rev
, vol.68
, pp. 474-500
-
-
Tropel, D.1
van der Meer, J.R.2
-
50
-
-
12944325784
-
One-component systems dominate signal transduction in prokaryotes
-
Ulrich, L. E., E. V. Koonin, and I. B. Zhulin. 2005. One-component systems dominate signal transduction in prokaryotes. Trends Microbiol. 13:52-56.
-
(2005)
Trends Microbiol
, vol.13
, pp. 52-56
-
-
Ulrich, L.E.1
Koonin, E.V.2
Zhulin, I.B.3
-
51
-
-
4944257147
-
Transcriptional regulation of the ant operon, encoding two-component anthranilate 1,2-dioxygenase, on the carbazole-degradative plasmid pCAR1 of Pseudomonas resinovorans strain CA10
-
Urata, M., M. Miyakoshi, S. Kai, K. Maeda, H. Habe, T. Omori, H. Yamane, and H. Nojiri. 2004. Transcriptional regulation of the ant operon, encoding two-component anthranilate 1,2-dioxygenase, on the carbazole-degradative plasmid pCAR1 of Pseudomonas resinovorans strain CA10. J. Bacteriol. 186:6815-6823.
-
(2004)
J. Bacteriol
, vol.186
, pp. 6815-6823
-
-
Urata, M.1
Miyakoshi, M.2
Kai, S.3
Maeda, K.4
Habe, H.5
Omori, T.6
Yamane, H.7
Nojiri, H.8
-
52
-
-
33846904705
-
A gene cluster encoding cholesterol catabolism in a soil actinomycete provides insight into Mycobacterium tuberculosis survival in macrophages
-
Van der Geize, R., K. Yam, T. Heuser, M. H. Wilbrink, H. Hara, M. C. Anderton, E. Sim, L. Dijkhuizen, J. E. Davies, W. W. Mohn, and L. D. Eltis. 2007. A gene cluster encoding cholesterol catabolism in a soil actinomycete provides insight into Mycobacterium tuberculosis survival in macrophages. Proc. Natl. Acad. Sci. USA 104:1947-1952.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 1947-1952
-
-
Van der Geize, R.1
Yam, K.2
Heuser, T.3
Wilbrink, M.H.4
Hara, H.5
Anderton, M.C.6
Sim, E.7
Dijkhuizen, L.8
Davies, J.E.9
Mohn, W.W.10
Eltis, L.D.11
-
53
-
-
0038623310
-
Characterization of the second LysR-type regulator in the biphenyl-catabolic gene cluster of Pseudomonas pseudoalcaligenes KF707
-
Watanabe, T., H. Fujihara, and K. Furukawa. 2003. Characterization of the second LysR-type regulator in the biphenyl-catabolic gene cluster of Pseudomonas pseudoalcaligenes KF707. J. Bacteriol. 185:3575-3582.
-
(2003)
J. Bacteriol
, vol.185
, pp. 3575-3582
-
-
Watanabe, T.1
Fujihara, H.2
Furukawa, K.3
-
54
-
-
0034613238
-
Versatile transcription of biphenyl catabolic bph operon in Pseudomonas pseudoalcaligenes KF707
-
Watanabe, T., R. Inoue, N. Kimura, and K. Furukawa. 2000. Versatile transcription of biphenyl catabolic bph operon in Pseudomonas pseudoalcaligenes KF707. J. Biol. Chem. 275:31016- 31023.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 31016-31023
-
-
Watanabe, T.1
Inoue, R.2
Kimura, N.3
Furukawa, K.4
-
55
-
-
0031804925
-
Degradation of dioxin-like compounds by microorganisms
-
Wittich, R.-M. 1998. Degradation of dioxin-like compounds by microorganisms. Appl. Microbiol. Biotechnol. 49:489-499.
-
(1998)
Appl. Microbiol. Biotechnol
, vol.49
, pp. 489-499
-
-
Wittich, R.-M.1
-
56
-
-
0026561682
-
Metabolism of dibenzo-p-dioxin by Sphingomonas sp. strain RW1
-
Wittich, R. M., H. Wilkes, V. Sinnwell, W. Francke, and P. Fortnagel. 1992. Metabolism of dibenzo-p-dioxin by Sphingomonas sp. strain RW1. Appl. Environ. Microbiol. 58:1005-1010.
-
(1992)
Appl. Environ. Microbiol
, vol.58
, pp. 1005-1010
-
-
Wittich, R.M.1
Wilkes, H.2
Sinnwell, V.3
Francke, W.4
Fortnagel, P.5
-
57
-
-
1642457208
-
Properties and functions of GAF domains in cyclic nucleotide phosphodiesterases and other proteins
-
Zoraghi, R., J. D. Corbin, and S. H. Francis. 2004. Properties and functions of GAF domains in cyclic nucleotide phosphodiesterases and other proteins. Mol. Pharmacol. 65:267-278.
-
(2004)
Mol. Pharmacol
, vol.65
, pp. 267-278
-
-
Zoraghi, R.1
Corbin, J.D.2
Francis, S.H.3
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