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Volumn 110, Issue 22, 2013, Pages 8858-8863

Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates

Author keywords

5' processing; RNA decapping; RNA stability

Indexed keywords

BACTERIAL ENZYME; GUANOSINE; NUCLEOTIDE; RNA PYROPHOSPHOHYDROLASE; UNCLASSIFIED DRUG;

EID: 84878434262     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1221510110     Document Type: Article
Times cited : (34)

References (23)
  • 1
    • 34250729202 scopus 로고    scopus 로고
    • Maturation and degradation of RNA in bacteria
    • Condon C (2007) Maturation and degradation of RNA in bacteria. Curr Opin Microbiol 10(3):271-278.
    • (2007) Curr Opin Microbiol , vol.10 , Issue.3 , pp. 271-278
    • Condon, C.1
  • 2
    • 62449336685 scopus 로고    scopus 로고
    • RNA processing in bacteria
    • ed Schaechter M ( Elsevier, Oxford), 3rd Ed
    • Condon C (2009) RNA processing in bacteria. Encyclopedia of Microbiology, ed Schaechter M (Elsevier, Oxford), 3rd Ed, Vol 5, pp 395-408.
    • (2009) Encyclopedia of Microbiology , vol.5 , pp. 395-408
    • Condon, C.1
  • 3
    • 38349117689 scopus 로고    scopus 로고
    • The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal
    • Deana A, Celesnik H, Belasco JG (2008) The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal. Nature 451(7176):355-358.
    • (2008) Nature , vol.451 , Issue.7176 , pp. 355-358
    • Deana, A.1    Celesnik, H.2    Belasco, J.G.3
  • 4
    • 80052988291 scopus 로고    scopus 로고
    • An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis
    • Richards J, et al. (2011) An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis. Mol Cell 43(6):940-949.
    • (2011) Mol Cell , vol.43 , Issue.6 , pp. 940-949
    • Richards, J.1
  • 5
    • 0032531768 scopus 로고    scopus 로고
    • Ribonuclease E is a 5'-end-dependent endonuclease
    • Mackie GA (1998) Ribonuclease E is a 5'-end-dependent endonuclease. Nature 395 (6703):720-723.
    • (1998) Nature , vol.395 , Issue.6703 , pp. 720-723
    • Mackie, G.A.1
  • 6
    • 34249101864 scopus 로고    scopus 로고
    • 5'-to-3' exoribonuclease activity in bacteria: Role of RNase J1 in rRNA maturation and 5' stability of mRNA
    • Mathy N, et al. (2007) 5'-to-3' exoribonuclease activity in bacteria: Role of RNase J1 in rRNA maturation and 5' stability of mRNA. Cell 129(4):681-692.
    • (2007) Cell , vol.129 , Issue.4 , pp. 681-692
    • Mathy, N.1
  • 7
    • 27144495430 scopus 로고    scopus 로고
    • Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover
    • Callaghan AJ, et al. (2005) Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover. Nature 437(7062):1187-1191.
    • (2005) Nature , vol.437 , Issue.7062 , pp. 1187-1191
    • Callaghan, A.J.1
  • 8
    • 80052465746 scopus 로고    scopus 로고
    • Molecular basis for the recognition and cleavage of RNA by the bifunctional 5'-3' exo/endoribonuclease RNase
    • Dorléans A, et al. (2011) Molecular basis for the recognition and cleavage of RNA by the bifunctional 5'-3' exo/endoribonuclease RNase J. Structure 19(9):1252-1261.
    • (2011) J. Structure , vol.19 , Issue.9 , pp. 1252-1261
    • Dorléans, A.1
  • 9
    • 70450222923 scopus 로고    scopus 로고
    • RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis
    • Shahbabian K, Jamalli A, Zig L, Putzer H (2009) RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis. EMBO J 28(22):3523-3533.
    • (2009) EMBO J , vol.28 , Issue.22 , pp. 3523-3533
    • Shahbabian, K.1    Jamalli, A.2    Zig, L.3    Putzer, H.4
  • 10
    • 9744224380 scopus 로고    scopus 로고
    • Structures and mechanisms of Nudix hydrolases
    • Mildvan AS, et al. (2005) Structures and mechanisms of Nudix hydrolases. Arch Biochem Biophys 433(1):129-143.
    • (2005) Arch Biochem Biophys , vol.433 , Issue.1 , pp. 129-143
    • Mildvan, A.S.1
  • 11
    • 0033214061 scopus 로고    scopus 로고
    • The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif
    • Dunckley T, Parker R (1999) The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif. EMBO J 18(19):5411-5422.
    • (1999) EMBO J , vol.18 , Issue.19 , pp. 5411-5422
    • Dunckley, T.1    Parker, R.2
  • 12
    • 61449241796 scopus 로고    scopus 로고
    • Structure and biological function of the RNA pyrophosphohydrolase BdRppH from Bdellovibrio bacteriovorus
    • Messing SA, et al. (2009) Structure and biological function of the RNA pyrophosphohydrolase BdRppH from Bdellovibrio bacteriovorus. Structure 17(3):472-481.
    • (2009) Structure , vol.17 , Issue.3 , pp. 472-481
    • Messing, S.A.1
  • 13
    • 84878457429 scopus 로고    scopus 로고
    • Specificity of RppH-dependent RNA degradation in Bacillus subtilis
    • Hsieh P-K, Richards J, Liu Q, Belasco JG (2013) Specificity of RppH-dependent RNA degradation in Bacillus subtilis. Proc Natl Acad Sci USA 110:8864-8869.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 8864-8869
    • Hsieh, P.-K.1    Richards, J.2    Liu, Q.3    Belasco, J.G.4
  • 15
    • 0034701056 scopus 로고    scopus 로고
    • Mutational, kinetic, and NMR studies of the roles of conserved glutamate residues and of lysine-39 in the mechanism of the MutT pyrophosphohydrolase
    • Harris TK, Wu G, Massiah MA, Mildvan AS (2000) Mutational, kinetic, and NMR studies of the roles of conserved glutamate residues and of lysine-39 in the mechanism of the MutT pyrophosphohydrolase. Biochemistry 39(7):1655-1674.
    • (2000) Biochemistry , vol.39 , Issue.7 , pp. 1655-1674
    • Harris, T.K.1    Wu, G.2    Massiah, M.A.3    Mildvan, A.S.4
  • 16
    • 21644479309 scopus 로고    scopus 로고
    • Molecular mechanism of the Thermus thermophilus ADP-ribose pyrophosphatase from mutational and kinetic studies
    • Ooga T, Yoshiba S, Nakagawa N, Kuramitsu S, Masui R (2005) Molecular mechanism of the Thermus thermophilus ADP-ribose pyrophosphatase from mutational and kinetic studies. Biochemistry 44(26):9320-9329.
    • (2005) Biochemistry , vol.44 , Issue.26 , pp. 9320-9329
    • Ooga, T.1    Yoshiba, S.2    Nakagawa, N.3    Kuramitsu, S.4    Masui, R.5
  • 17
    • 0037199445 scopus 로고    scopus 로고
    • Mechanism of the Escherichia coli ADP-ribose pyrophosphatase, a Nudix hydrolase
    • Gabelli SB, et al. (2002) Mechanism of the Escherichia coli ADP-ribose pyrophosphatase, a Nudix hydrolase. Biochemistry 41(30):9279-9285.
    • (2002) Biochemistry , vol.41 , Issue.30 , pp. 9279-9285
    • Gabelli, S.B.1
  • 18
    • 0037015160 scopus 로고    scopus 로고
    • Mutational, kinetic, and NMR studies of the mechanism of E. coli GDP-mannose mannosyl hydrolase, an unusual Nudix enzyme
    • Legler PM, Massiah MA, Mildvan AS (2002) Mutational, kinetic, and NMR studies of the mechanism of E. coli GDP-mannose mannosyl hydrolase, an unusual Nudix enzyme. Biochemistry 41(35):10834-10848.
    • (2002) Biochemistry , vol.41 , Issue.35 , pp. 10834-10848
    • Legler, P.M.1    Massiah, M.A.2    Mildvan, A.S.3
  • 19
    • 78049392640 scopus 로고    scopus 로고
    • Identification of regulatory RNAs in Bacillus subtilis
    • Irnov I, Sharma CM, Vogel J, Winkler WC (2010) Identification of regulatory RNAs in Bacillus subtilis. Nucleic Acids Res 38(19):6637-6651.
    • (2010) Nucleic Acids Res , vol.38 , Issue.19 , pp. 6637-6651
    • Irnov, I.1    Sharma, C.M.2    Vogel, J.3    Winkler, W.C.4
  • 20
    • 0021111879 scopus 로고
    • Compilation and analysis of Escherichia coli promoter DNA sequences
    • Hawley DK, McClure WR (1983) Compilation and analysis of Escherichia coli promoter DNA sequences. Nucleic Acids Res 11(8):2237-2255.
    • (1983) Nucleic Acids Res , vol.11 , Issue.8 , pp. 2237-2255
    • Hawley, D.K.1    McClure, W.R.2
  • 21
    • 0000867858 scopus 로고    scopus 로고
    • Single transition-to-single transition polarization transfer (ST2-PT) in [15N,1H]-TROSY
    • Pervushin KV, Wider G, Wüthrich K (1998) Single transition-to-single transition polarization transfer (ST2-PT) in [15N,1H]-TROSY. J Biomol NMR 12(2):345-348.
    • (1998) J Biomol NMR , vol.12 , Issue.2 , pp. 345-348
    • Pervushin, K.V.1    Wider, G.2    Wüthrich, K.3
  • 22
    • 0029400480 scopus 로고
    • NMRPipe: A multidimensional spectral processing system based on UNIX pipes
    • Delaglio F, et al. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes. J Biomol NMR 6(3):277-293.
    • (1995) J Biomol NMR , vol.6 , Issue.3 , pp. 277-293
    • Delaglio, F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.