-
1
-
-
0033598784
-
Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis
-
Achtman M, Zurth K, Morelli G, Torrea G, Guiyoule A, et al. (1999) Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis. Proc Natl Acad Sci U S A 96: 14043-14048.
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 14043-14048
-
-
Achtman, M.1
Zurth, K.2
Morelli, G.3
Torrea, G.4
Guiyoule, A.5
-
2
-
-
0036792524
-
Salmonella typhi, the causative agent of typhoid fever, is approximately 50,000 years old
-
Kidgell C, Reichard U, Wain J, Linz B, Torpdahl M, et al. (2002) Salmonella typhi, the causative agent of typhoid fever, is approximately 50,000 years old. Infect Genet Evol 2: 39-45.
-
(2002)
Infect Genet Evol
, vol.2
, pp. 39-45
-
-
Kidgell, C.1
Reichard, U.2
Wain, J.3
Linz, B.4
Torpdahl, M.5
-
3
-
-
33847201150
-
An African origin for the intimate association between humans and Helicobacter pylori
-
Linz B, Balloux F, Moodley Y, Manica A, Liu H, et al. (2007) An African origin for the intimate association between humans and Helicobacter pylori. Nature 445: 915-918.
-
(2007)
Nature
, vol.445
, pp. 915-918
-
-
Linz, B.1
Balloux, F.2
Moodley, Y.3
Manica, A.4
Liu, H.5
-
4
-
-
0030931719
-
Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination
-
Sreevatsan S, Pan X, Stockbauer KE, Connell ND, Kreiswirth BN, et al. (1997) Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination. Proc Natl Acad Sci U S A 94: 9869-9874.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 9869-9874
-
-
Sreevatsan, S.1
Pan, X.2
Stockbauer, K.E.3
Connell, N.D.4
Kreiswirth, B.N.5
-
5
-
-
38349175824
-
Global genetic population structure of Bacillus anthracis
-
Van Ert MN, Easterday WR, Huynh LY, Okinaka RT, Hugh-Jones ME, et al. (2007) Global genetic population structure of Bacillus anthracis. PLOS ONE 2: e461.
-
(2007)
PLOS ONE
, vol.2
-
-
Van Ert, M.N.1
Easterday, W.R.2
Huynh, L.Y.3
Okinaka, R.T.4
Hugh-Jones, M.E.5
-
6
-
-
58149301586
-
Factors affecting the concordance between orthologous gene trees and species tree in bacteria
-
Castillo-Ramirez S, Gonzalez V, (2008) Factors affecting the concordance between orthologous gene trees and species tree in bacteria. BMC Evol Biol 8: 300.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 300
-
-
Castillo-Ramirez, S.1
Gonzalez, V.2
-
7
-
-
33646584164
-
Visualizing and assessing phylogenetic congruence of core gene sets: a case study of the gamma-proteobacteria
-
Susko E, Leigh J, Doolittle WF, Bapteste E, (2006) Visualizing and assessing phylogenetic congruence of core gene sets: a case study of the gamma-proteobacteria. Mol Biol Evol 23: 1019-1030.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 1019-1030
-
-
Susko, E.1
Leigh, J.2
Doolittle, W.F.3
Bapteste, E.4
-
8
-
-
84859150199
-
Extensive Genomic Variation within Clonal Complexes of Neisseria meningitidis
-
Hao W, Ma JH, Warren K, Tsang RSW, Low DE, et al. (2011) Extensive Genomic Variation within Clonal Complexes of Neisseria meningitidis. Genome Biol Evol 3: 1406-1418.
-
(2011)
Genome Biol Evol
, vol.3
, pp. 1406-1418
-
-
Hao, W.1
Ma, J.H.2
Warren, K.3
Tsang, R.S.W.4
Low, D.E.5
-
9
-
-
79955625067
-
Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome
-
Joseph B, Schwarz RF, Linke B, Blom J, Becker A, et al. (2011) Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome. PLOS ONE 6: e18441.
-
(2011)
PLOS ONE
, vol.6
-
-
Joseph, B.1
Schwarz, R.F.2
Linke, B.3
Blom, J.4
Becker, A.5
-
10
-
-
79551493539
-
Recombination shapes the structure of an environmental Vibrio cholerae population
-
Keymer DP, Boehm AB, (2011) Recombination shapes the structure of an environmental Vibrio cholerae population. Appl Environ Microbiol 77: 537-544.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 537-544
-
-
Keymer, D.P.1
Boehm, A.B.2
-
11
-
-
77956600970
-
Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification
-
Deng X, Phillippy AM, Li Z, Salzberg SL, Zhang W, (2010) Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification. BMC Genomics 11: 500.
-
(2010)
BMC Genomics
, vol.11
, pp. 500
-
-
Deng, X.1
Phillippy, A.M.2
Li, Z.3
Salzberg, S.L.4
Zhang, W.5
-
12
-
-
36549020646
-
Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome
-
Hiller NL, Janto B, Hogg JS, Boissy R, Yu S, et al. (2007) Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome. J Bacteriol 189: 8186-8195.
-
(2007)
J Bacteriol
, vol.189
, pp. 8186-8195
-
-
Hiller, N.L.1
Janto, B.2
Hogg, J.S.3
Boissy, R.4
Yu, S.5
-
13
-
-
33748052366
-
Extensive genomic plasticity in Pseudomonas aeruginosa revealed by identification and distribution studies of novel genes among clinical isolates
-
Shen K, Sayeed S, Antalis P, Gladitz J, Ahmed A, et al. (2006) Extensive genomic plasticity in Pseudomonas aeruginosa revealed by identification and distribution studies of novel genes among clinical isolates. Infect Immun 74: 5272-5283.
-
(2006)
Infect Immun
, vol.74
, pp. 5272-5283
-
-
Shen, K.1
Sayeed, S.2
Antalis, P.3
Gladitz, J.4
Ahmed, A.5
-
14
-
-
25444524604
-
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"
-
Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, et al. (2005) Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome". Proc Natl Acad Sci U S A 102: 13950-13955.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 13950-13955
-
-
Tettelin, H.1
Masignani, V.2
Cieslewicz, M.J.3
Donati, C.4
Medini, D.5
-
15
-
-
80052038815
-
Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica
-
den Bakker HC, Moreno Switt AI, Govoni G, Cummings CA, Ranieri ML, et al. (2011) Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica. BMC Genomics 12: 425.
-
(2011)
BMC Genomics
, vol.12
, pp. 425
-
-
den Bakker, H.C.1
Moreno Switt, A.I.2
Govoni, G.3
Cummings, C.A.4
Ranieri, M.L.5
-
16
-
-
79955559191
-
Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species
-
Luo C, Walk ST, Gordon DM, Feldgarden M, Tiedje JM, et al. (2011) Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species. Proc Natl Acad Sci U S A 108: 7200-7205.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 7200-7205
-
-
Luo, C.1
Walk, S.T.2
Gordon, D.M.3
Feldgarden, M.4
Tiedje, J.M.5
-
17
-
-
84860895220
-
Bacterial effectors target the plant cell nucleus to subvert host transcription
-
Canonne J, Rivas S, (2012) Bacterial effectors target the plant cell nucleus to subvert host transcription. Plant Signal Behav 7: 217-221.
-
(2012)
Plant Signal Behav
, vol.7
, pp. 217-221
-
-
Canonne, J.1
Rivas, S.2
-
18
-
-
84866447837
-
Shigella: a model of virulence regulation in vivo
-
Marteyn B, Gazi A, Sansonetti P, (2012) Shigella: a model of virulence regulation in vivo. Gut microbes 3: 104-120.
-
(2012)
Gut Microbes
, vol.3
, pp. 104-120
-
-
Marteyn, B.1
Gazi, A.2
Sansonetti, P.3
-
19
-
-
84859268600
-
Pseudomonas syringae type III effector repertoires: last words in endless arguments
-
Lindeberg M, Cunnac S, Collmer A, (2012) Pseudomonas syringae type III effector repertoires: last words in endless arguments. Trends Microbiol 20: 199-208.
-
(2012)
Trends Microbiol
, vol.20
, pp. 199-208
-
-
Lindeberg, M.1
Cunnac, S.2
Collmer, A.3
-
20
-
-
84856946327
-
Bacterial Type IV secretion systems: versatile virulence machines
-
Voth DE, Broederdorf LJ, Graham JG, (2012) Bacterial Type IV secretion systems: versatile virulence machines. Future Microbiol 7: 241-257.
-
(2012)
Future Microbiol
, vol.7
, pp. 241-257
-
-
Voth, D.E.1
Broederdorf, L.J.2
Graham, J.G.3
-
22
-
-
0028850433
-
Transfer of two Burkholderia and an Alcaligenes species to Ralstonia gen. Nov.: Proposal of Ralstonia pickettii (Ralston, Palleroni and Doudoroff 1973) comb. Nov., Ralstonia solanacearum (Smith 1896) comb. Nov. and Ralstonia eutropha (Davis 1969) comb. Nov
-
Yabuuchi E, Kosako Y, Yano I, Hotta H, Nishiuchi Y, (1995) Transfer of two Burkholderia and an Alcaligenes species to Ralstonia gen. Nov.: Proposal of Ralstonia pickettii (Ralston, Palleroni and Doudoroff 1973) comb. Nov., Ralstonia solanacearum (Smith 1896) comb. Nov. and Ralstonia eutropha (Davis 1969) comb. Nov. Microbiol Immunol 39: 897-904.
-
(1995)
Microbiol Immunol
, vol.39
, pp. 897-904
-
-
Yabuuchi, E.1
Kosako, Y.2
Yano, I.3
Hotta, H.4
Nishiuchi, Y.5
-
23
-
-
84982335268
-
Characteristics of Pseudomonas solanacearum
-
Hayward AC, (1964) Characteristics of Pseudomonas solanacearum. J Appl Microbiol 27: 265-277.
-
(1964)
J Appl Microbiol
, vol.27
, pp. 265-277
-
-
Hayward, A.C.1
-
24
-
-
18444396791
-
How complex is the Ralstonia solanacearum species complex?
-
In Allen C, Prior P, Hayward AC, editors, APS Press
-
Fegan M, Prior P (2005) How complex is the Ralstonia solanacearum species complex? In Allen C, Prior P, Hayward AC, editors. Bacterial Wilt: The Disease and the Ralstonia solanacearum species complex. APS Press. pp. 449-461.
-
(2005)
Bacterial Wilt: The Disease and the Ralstonia solanacearum species complex
, pp. 449-461
-
-
Fegan, M.1
Prior, P.2
-
25
-
-
0006244522
-
Genomic fingerprinting: towards a unified view of the Pseudomonas solanacearum species complex
-
In Hayward AC, Hartman GL, editors., CAB International
-
Gillings MR, Fahy P (1994) Genomic fingerprinting: towards a unified view of the Pseudomonas solanacearum species complex. In Hayward AC, Hartman GL, editors. Bacterial wilt: the disease and its causative agent Pseudomonas solanacearum, CAB International. pp. 95-112.
-
(1994)
Bacterial wilt: The disease and its causative agent Pseudomonas solanacearum
, pp. 95-112
-
-
Gillings, M.R.1
Fahy, P.2
-
26
-
-
4544261484
-
Simple sequence repeats and compositional bias in the bipartite Ralstonia solanacearum GMI1000 genome
-
Coenye T, Vandamme P, (2003) Simple sequence repeats and compositional bias in the bipartite Ralstonia solanacearum GMI1000 genome. BMC Genomics 4: 10.
-
(2003)
BMC Genomics
, vol.4
, pp. 10
-
-
Coenye, T.1
Vandamme, P.2
-
27
-
-
29444453684
-
Identification of open reading frames unique to a select agent: Ralstonia solanacearum race 3 biovar 2
-
Gabriel DW, Allen C, Schell M, Denny TP, Greenberg JT, et al. (2006) Identification of open reading frames unique to a select agent: Ralstonia solanacearum race 3 biovar 2. Mol Plant Microbe Interact 19: 69-79.
-
(2006)
Mol Plant Microbe Interact
, vol.19
, pp. 69-79
-
-
Gabriel, D.W.1
Allen, C.2
Schell, M.3
Denny, T.P.4
Greenberg, J.T.5
-
28
-
-
4744374965
-
Lessons learned from the genome analysis of Ralstonia solanacearum
-
Genin S, Boucher C, (2004) Lessons learned from the genome analysis of Ralstonia solanacearum. Annu Rev Phytopathol 42: 107-134.
-
(2004)
Annu Rev Phytopathol
, vol.42
, pp. 107-134
-
-
Genin, S.1
Boucher, C.2
-
29
-
-
33846223844
-
Genomic structure and phylogeny of the plant pathogen Ralstonia solanacearum inferred from gene distribution analysis
-
Guidot A, Prior P, Schoenfeld J, Carrere S, Genin S, et al. (2007) Genomic structure and phylogeny of the plant pathogen Ralstonia solanacearum inferred from gene distribution analysis. J Bacteriol 189: 377-387.
-
(2007)
J Bacteriol
, vol.189
, pp. 377-387
-
-
Guidot, A.1
Prior, P.2
Schoenfeld, J.3
Carrere, S.4
Genin, S.5
-
30
-
-
67349210007
-
Horizontal Gene Transfer Between Ralstonia solanacearum Strains Detected by Comparative Genomic Hybridization on Microarrays
-
Guidot A, Coupat B, Fall S, Prior P, Bertolla F, (2009) Horizontal Gene Transfer Between Ralstonia solanacearum Strains Detected by Comparative Genomic Hybridization on Microarrays. ISME J 3: 549-562.
-
(2009)
ISME J
, vol.3
, pp. 549-562
-
-
Guidot, A.1
Coupat, B.2
Fall, S.3
Prior, P.4
Bertolla, F.5
-
31
-
-
77954582930
-
Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence
-
Remenant B, Coupat-Goutaland B, Guidot A, Cellier G, Wicker E, et al. (2010) Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence. BMC Genomics 11: 379.
-
(2010)
BMC Genomics
, vol.11
, pp. 379
-
-
Remenant, B.1
Coupat-Goutaland, B.2
Guidot, A.3
Cellier, G.4
Wicker, E.5
-
32
-
-
0037203829
-
Genome sequence of the plant pathogen Ralstonia solanacearum
-
Salanoubat M, Genin S, Artiguenave F, Gouzy J, Mangenot S, et al. (2002) Genome sequence of the plant pathogen Ralstonia solanacearum. Nature 415: 497-502.
-
(2002)
Nature
, vol.415
, pp. 497-502
-
-
Salanoubat, M.1
Genin, S.2
Artiguenave, F.3
Gouzy, J.4
Mangenot, S.5
-
33
-
-
17644374057
-
Phylogenetic relationships of Ralstonia solanacearum species complex strains from Asia and other continents based on 16S rDNA, endoglucanase, and hrpB gene sequences
-
Villa JE, Tsuchiya K, Horita M, Natural M, Opina N, et al. (2005) Phylogenetic relationships of Ralstonia solanacearum species complex strains from Asia and other continents based on 16S rDNA, endoglucanase, and hrpB gene sequences. J Gen Plant Pathol 71: 39-46.
-
(2005)
J Gen Plant Pathol
, vol.71
, pp. 39-46
-
-
Villa, J.E.1
Tsuchiya, K.2
Horita, M.3
Natural, M.4
Opina, N.5
-
34
-
-
0027537362
-
Why it pays for bacteria to delete disused DNA and to maintain megaplasmids
-
Stouthamer AH, Kooijman SA, (1993) Why it pays for bacteria to delete disused DNA and to maintain megaplasmids. Antonie Van Leeuwenhoek 63: 39-43.
-
(1993)
Antonie Van Leeuwenhoek
, vol.63
, pp. 39-43
-
-
Stouthamer, A.H.1
Kooijman, S.A.2
-
35
-
-
0029157238
-
A physical genome map of the Burkholderia cepacia type strain
-
Rodley PD, Romling U, Tummler B, (1995) A physical genome map of the Burkholderia cepacia type strain. Mol Microbiol 17: 57-67.
-
(1995)
Mol Microbiol
, vol.17
, pp. 57-67
-
-
Rodley, P.D.1
Romling, U.2
Tummler, B.3
-
36
-
-
44849124999
-
Diversity and Occurrence of Burkholderia Spp. in the Natural Environment
-
Compant S, Nowak J, Coenye T, Clément C, Ait Barka E, (2008) Diversity and Occurrence of Burkholderia Spp. in the Natural Environment. FEMS Microbiol Rev 32: 607-626.
-
(2008)
FEMS Microbiol Rev
, vol.32
, pp. 607-626
-
-
Compant, S.1
Nowak, J.2
Coenye, T.3
Clément, C.4
Ait Barka, E.5
-
37
-
-
78650771854
-
The Various Lifestyles of the Burkholderia Cepacia Complex Species: a Tribute to Adaptation
-
Vial L, Chapalain A, Groleau MC, Déziel E, (2011) The Various Lifestyles of the Burkholderia Cepacia Complex Species: a Tribute to Adaptation. Environ Microbiol 13: 1-12.
-
(2011)
Environ Microbiol
, vol.13
, pp. 1-12
-
-
Vial, L.1
Chapalain, A.2
Groleau, M.C.3
Déziel, E.4
-
38
-
-
35348823779
-
Burkholderia Diversity and Versatility: An Inventory of the Extracellular Products
-
Vial L, Groleau MC, Dekimpe V, Déziel E, (2007) Burkholderia Diversity and Versatility: An Inventory of the Extracellular Products. J Microbiol Biotechnol 17: 1407-1429.
-
(2007)
J Microbiol Biotechnol
, vol.17
, pp. 1407-1429
-
-
Vial, L.1
Groleau, M.C.2
Dekimpe, V.3
Déziel, E.4
-
39
-
-
84861162344
-
Phylogeny and population structure of brown rot- and Moko disease-causing strains of Ralstonia solanacearum phylotype II
-
Cellier G, Remenant B, Chiroleu F, Lefeuvre P, Prior P, (2012) Phylogeny and population structure of brown rot- and Moko disease-causing strains of Ralstonia solanacearum phylotype II. Appl Environ Microbiol 78: 2367-2375.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 2367-2375
-
-
Cellier, G.1
Remenant, B.2
Chiroleu, F.3
Lefeuvre, P.4
Prior, P.5
-
40
-
-
84934438960
-
UNAFold: software for nucleic acid folding and hybridization
-
Markham NR, Zuker M, (2008) UNAFold: software for nucleic acid folding and hybridization. Methods Mol Biol 453: 3-31.
-
(2008)
Methods Mol Biol
, vol.453
, pp. 3-31
-
-
Markham, N.R.1
Zuker, M.2
-
41
-
-
31644444476
-
MaGe: a microbial genome annotation system supported by synteny results
-
Vallenet D, Labarre L, Rouy Z, Barbe V, Bocs S, et al. (2006) MaGe: a microbial genome annotation system supported by synteny results. Nucleic Acids Res 34: 53-65.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 53-65
-
-
Vallenet, D.1
Labarre, L.2
Rouy, Z.3
Barbe, V.4
Bocs, S.5
-
42
-
-
84860109324
-
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, et al. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61: 539-542.
-
(2012)
Syst Biol
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
Ayres, D.L.4
Darling, A.5
-
43
-
-
0030660581
-
A genomic perspective on protein families
-
Tatusov RL, Koonin EV, Lipman DJ, (1997) A genomic perspective on protein families. Science 278: 631-637.
-
(1997)
Science
, vol.278
, pp. 631-637
-
-
Tatusov, R.L.1
Koonin, E.V.2
Lipman, D.J.3
-
44
-
-
33644873699
-
ISfinder: the reference centre for bacterial insertion sequences
-
Siguier P, Perochon J, Lestrade L, Mahillon J, Chandler M, (2006) ISfinder: the reference centre for bacterial insertion sequences. Nucleic Acids Res 34: D32-36.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Siguier, P.1
Perochon, J.2
Lestrade, L.3
Mahillon, J.4
Chandler, M.5
-
45
-
-
79961135005
-
-
R Development Core Team, Vienna, Austria: R Foundation for Statistical Computing
-
R Development Core Team (2011) R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing.
-
(2011)
R: A Language and Environment for Statistical Computing
-
-
-
46
-
-
84861739093
-
ape 3.0: New tools for distance-based phylogenetics and evolutionary analysis in R
-
Popescu AA, Huber KT, Paradis E, (2012) ape 3.0: New tools for distance-based phylogenetics and evolutionary analysis in R. Bioinformatics. 28: 1536-1537.
-
(2012)
Bioinformatics
, vol.28
, pp. 1536-1537
-
-
Popescu, A.A.1
Huber, K.T.2
Paradis, E.3
-
47
-
-
78149394492
-
Deciphering phenotypic diversity of Ralstonia solanacearum strains pathogenic to potato
-
Cellier G, Prior P, (2010) Deciphering phenotypic diversity of Ralstonia solanacearum strains pathogenic to potato. Phytopathology 100: 1250-1261.
-
(2010)
Phytopathology
, vol.100
, pp. 1250-1261
-
-
Cellier, G.1
Prior, P.2
-
48
-
-
84859894446
-
Contrasting recombination patterns and demographic histories of the plant pathogen Ralstonia solanacearum inferred from MLSA
-
Wicker E, Lefeuvre P, de Cambiaire JC, Lemaire C, Poussier S, et al. (2012) Contrasting recombination patterns and demographic histories of the plant pathogen Ralstonia solanacearum inferred from MLSA. ISME J 6: 961-974.
-
(2012)
ISME J
, vol.6
, pp. 961-974
-
-
Wicker, E.1
Lefeuvre, P.2
de Cambiaire, J.C.3
Lemaire, C.4
Poussier, S.5
-
49
-
-
78651281319
-
Genomic fluidity: an integrative view of gene diversity within microbial populations
-
Kislyuk AO, Haegeman B, Bergman NH, Weitz JS (2011) Genomic fluidity: an integrative view of gene diversity within microbial populations. BMC Genomics 12, 32.
-
(2011)
BMC Genomics
, vol.12
, pp. 32
-
-
Kislyuk, A.O.1
Haegeman, B.2
Bergman, N.H.3
Weitz, J.S.4
-
50
-
-
84861206683
-
A neutral theory of genome evolution and the frequency distribution of genes
-
Haegeman B, Weitz JS, (2012) A neutral theory of genome evolution and the frequency distribution of genes. BMC Genomics 13: 196.
-
(2012)
BMC Genomics
, vol.13
, pp. 196
-
-
Haegeman, B.1
Weitz, J.S.2
-
52
-
-
0033616714
-
Horizontal gene transfer among genomes: the complexity hypothesis
-
Jain R, Rivera MC, Lake JA, (1999) Horizontal gene transfer among genomes: the complexity hypothesis. Proc Natl Acad Sci U S A 96: 3801-3806.
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 3801-3806
-
-
Jain, R.1
Rivera, M.C.2
Lake, J.A.3
-
53
-
-
79952840493
-
The complexity hypothesis revisited: connectivity rather than function constitutes a barrier to horizontal gene transfer
-
Cohen O, Gophna U, Pupko T, (2011) The complexity hypothesis revisited: connectivity rather than function constitutes a barrier to horizontal gene transfer. Mol Biol Evol 28: 1481-1489.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 1481-1489
-
-
Cohen, O.1
Gophna, U.2
Pupko, T.3
-
54
-
-
26444558214
-
How essential are nonessential genes?
-
Fang G, Rocha E, Danchin A, (2005) How essential are nonessential genes? Mol Biol Evol 22: 2147-2156.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 2147-2156
-
-
Fang, G.1
Rocha, E.2
Danchin, A.3
-
55
-
-
36249021315
-
Genome-wide experimental determination of barriers to horizontal gene transfer
-
Sorek R, Zhu Y, Creevey CJ, Francino MP, Bork P, et al. (2007) Genome-wide experimental determination of barriers to horizontal gene transfer. Science 318: 1449-1452.
-
(2007)
Science
, vol.318
, pp. 1449-1452
-
-
Sorek, R.1
Zhu, Y.2
Creevey, C.J.3
Francino, M.P.4
Bork, P.5
-
56
-
-
79953315166
-
Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes
-
Popa O, Hazkani-Covo E, Landan G, Martin W, Dagan T, (2011) Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes. Genome Res 21: 599-609.
-
(2011)
Genome Res
, vol.21
, pp. 599-609
-
-
Popa, O.1
Hazkani-Covo, E.2
Landan, G.3
Martin, W.4
Dagan, T.5
-
57
-
-
12344283074
-
Determinants of adaptive evolution at the molecular level: the extended complexity hypothesis
-
Aris-Brosou S, (2005) Determinants of adaptive evolution at the molecular level: the extended complexity hypothesis. Mol Biol Evol 22: 200-209.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 200-209
-
-
Aris-Brosou, S.1
-
58
-
-
0022896187
-
Virulence genes are carried by a megaplasmid of the plant pathogen Pseudomonas solanacearum
-
Boucher C, Martinel A, Barberis P, Alloing G, Zischek C, (1986) Virulence genes are carried by a megaplasmid of the plant pathogen Pseudomonas solanacearum. Mol Gen Genet 205: 270-275.
-
(1986)
Mol Gen Genet
, vol.205
, pp. 270-275
-
-
Boucher, C.1
Martinel, A.2
Barberis, P.3
Alloing, G.4
Zischek, C.5
-
59
-
-
59249089471
-
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths
-
Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, et al. (2009) Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLOS Genet 5: e1000344.
-
(2009)
PLOS Genet
, vol.5
-
-
Touchon, M.1
Hoede, C.2
Tenaillon, O.3
Barbe, V.4
Baeriswyl, S.5
-
60
-
-
0030734261
-
Conditions for natural transformation of Ralstonia solanacearum
-
Bertolla F, Van Gijsegem F, Nesme X, Simonet P, (1997) Conditions for natural transformation of Ralstonia solanacearum. Appl Environ Microbiol 63: 4965-4968.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4965-4968
-
-
Bertolla, F.1
Van Gijsegem, F.2
Nesme, X.3
Simonet, P.4
-
61
-
-
51649089028
-
Natural transformation in the Ralstonia solanacearum species complex: number and size of DNA that can be transferred
-
Coupat B, Chaumeille-Dole F, Fall S, Prior P, Simonet P, et al. (2008) Natural transformation in the Ralstonia solanacearum species complex: number and size of DNA that can be transferred. FEMS Microbiol Ecol 66: 14-24.
-
(2008)
FEMS Microbiol Ecol
, vol.66
, pp. 14-24
-
-
Coupat, B.1
Chaumeille-Dole, F.2
Fall, S.3
Prior, P.4
Simonet, P.5
-
62
-
-
0032915826
-
During infection of its host, the plant pathogen Ralstonia solanacearum naturally develops a state of competence and exchanges genetic material
-
Bertolla F, Frostesard A, Brito B, Nesme X, Simonet P, (1999) During infection of its host, the plant pathogen Ralstonia solanacearum naturally develops a state of competence and exchanges genetic material. Mol Plant Microbe Interact 12: 467-72.
-
(1999)
Mol Plant Microbe Interact
, vol.12
, pp. 467-472
-
-
Bertolla, F.1
Frostesard, A.2
Brito, B.3
Nesme, X.4
Simonet, P.5
-
63
-
-
0000020758
-
Genetic diversity of Pseudomonas solanacearum: detection of restriction fragment length polymorphism with DNA probes that specify virulence and the hypersensitive response
-
Cook D, Barlow E, Sequeira L, Kelman A, (1989) Genetic diversity of Pseudomonas solanacearum: detection of restriction fragment length polymorphism with DNA probes that specify virulence and the hypersensitive response. Mol Plant Microbe Interact 2: 113-121.
-
(1989)
Mol Plant Microbe Interact
, vol.2
, pp. 113-121
-
-
Cook, D.1
Barlow, E.2
Sequeira, L.3
Kelman, A.4
-
64
-
-
84857470045
-
Patterns of Gene Flow Define Species of Thermophilic Archaea
-
Cadillo-Quiroz H, Didelot X, Held NL, Herrera A, Darling A, et al. (2012) Patterns of Gene Flow Define Species of Thermophilic Archaea. PLOS Biol 10: e1001265.
-
(2012)
PLOS Biol
, vol.10
-
-
Cadillo-Quiroz, H.1
Didelot, X.2
Held, N.L.3
Herrera, A.4
Darling, A.5
|