메뉴 건너뛰기




Volumn 18, Issue , 2013, Pages 13-17

Cytochrome c oxidase subunit III (COX3) gene, an informative marker for phylogenetic analysis and differentiation of Babesia species in China

Author keywords

18S rRNA gene; Babesia; COB gene; COX3 gene; PCR RFLP; Phylogeny

Indexed keywords

CYTOCHROME B; CYTOCHROME C OXIDASE; GENOMIC DNA; RNA 18S;

EID: 84878365084     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2013.04.002     Document Type: Article
Times cited : (22)

References (36)
  • 1
    • 34250313691 scopus 로고    scopus 로고
    • Sequence polymorphism in the ribosomal DNA internal transcribed spacers differs among Theileria species
    • Aktas M., Bendele K.G., Altay K., Dumanli N., Tsuji M., Holman P.J. Sequence polymorphism in the ribosomal DNA internal transcribed spacers differs among Theileria species. Vet. Parasitol. 2007, 147:221-230.
    • (2007) Vet. Parasitol. , vol.147 , pp. 221-230
    • Aktas, M.1    Bendele, K.G.2    Altay, K.3    Dumanli, N.4    Tsuji, M.5    Holman, P.J.6
  • 2
    • 33845700008 scopus 로고    scopus 로고
    • Molecular sequence evidence for the reclassification of some Babesia species
    • Allsopp M.T., Allsopp B.A. Molecular sequence evidence for the reclassification of some Babesia species. Ann. NY. Acad. Sci. 2006, 1081:509-517.
    • (2006) Ann. NY. Acad. Sci. , vol.1081 , pp. 509-517
    • Allsopp, M.T.1    Allsopp, B.A.2
  • 3
    • 0344613211 scopus 로고    scopus 로고
    • Ribosomal ITS sequences and plant phylogenetic inference
    • Álvarez I., Wendel J.F. Ribosomal ITS sequences and plant phylogenetic inference. Mol. Phylogent. Evol. 2003, 29:417-434.
    • (2003) Mol. Phylogent. Evol. , vol.29 , pp. 417-434
    • Álvarez, I.1    Wendel, J.F.2
  • 4
    • 22044447217 scopus 로고    scopus 로고
    • Molecular markers and modern phylogenetics of mammals
    • Bannikova A. Molecular markers and modern phylogenetics of mammals. Zh. Obshch. Biol. 2004, 65:278.
    • (2004) Zh. Obshch. Biol. , vol.65 , pp. 278
    • Bannikova, A.1
  • 5
    • 84859873581 scopus 로고    scopus 로고
    • ALG11-a new variable DNA marker for sponge phylogeny: comparison of phylogenetic performances with the 18S rDNA and the COI gene
    • Belinky F., Szitenberg A., Goldfarb I., Feldstein T., Wörheide G., Ilan M., Huchon D. ALG11-a new variable DNA marker for sponge phylogeny: comparison of phylogenetic performances with the 18S rDNA and the COI gene. Mol. Phylogent Evol. 2012, 63:702-713.
    • (2012) Mol. Phylogent Evol. , vol.63 , pp. 702-713
    • Belinky, F.1    Szitenberg, A.2    Goldfarb, I.3    Feldstein, T.4    Wörheide, G.5    Ilan, M.6    Huchon, D.7
  • 6
    • 1842455190 scopus 로고    scopus 로고
    • In silico analysis of complete bacterial genomes: PCR, AFLP-PCR, and endonuclease restriction
    • Bikandi J., San M.R., Rementeria A., Garaizar J. In silico analysis of complete bacterial genomes: PCR, AFLP-PCR, and endonuclease restriction. Bioinformatics 2004, 20:798-799.
    • (2004) Bioinformatics , vol.20 , pp. 798-799
    • Bikandi, J.1    San, M.R.2    Rementeria, A.3    Garaizar, J.4
  • 7
    • 0032995527 scopus 로고    scopus 로고
    • Theileria parva ribosomal internal transcribed spacer sequences exhibit extensive polymorphism and mosaic evolution: application to the characterization of parasites from cattle and buffalo
    • Collins N.E., Allsopp B.A. Theileria parva ribosomal internal transcribed spacer sequences exhibit extensive polymorphism and mosaic evolution: application to the characterization of parasites from cattle and buffalo. Parasitology 1999, 118:541-551.
    • (1999) Parasitology , vol.118 , pp. 541-551
    • Collins, N.E.1    Allsopp, B.A.2
  • 8
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: a maximum likelihood approach
    • Felsenstein J. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 1981, 17:368-376.
    • (1981) J. Mol. Evol. , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 9
    • 84959798530 scopus 로고
    • Cases in which parsimony or compatibility methods will be positively misleading
    • Felsenstein J. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 1978, 27:401-410.
    • (1978) Syst. Zool. , vol.27 , pp. 401-410
    • Felsenstein, J.1
  • 10
    • 84873113265 scopus 로고    scopus 로고
    • Bovine babesiosis in the 21st century: advances in biology and functional genomics
    • pii: S0020-7519(12)00231-7.
    • Gohil S., Herrmann S., Günther S., Cooke B.M. Bovine babesiosis in the 21st century: advances in biology and functional genomics. Int. J. Parasitol. 2012, pii: S0020-7519(12)00231-7. 10.1016/j.ijpara.2012.09.008.
    • (2012) Int. J. Parasitol.
    • Gohil, S.1    Herrmann, S.2    Günther, S.3    Cooke, B.M.4
  • 12
  • 13
    • 84862810915 scopus 로고    scopus 로고
    • BQP35 is a novel member of the intrinsically unstructured protein (IUP) family which is a potential antigen for the sero-diagnosis of Babesia sp. BQ1 (Lintan) infection
    • Guan G., Moreau E., Liu J., Ma M., Rogniaux H., Liu A., Niu Q., Li Y., Ren Q., Luo J., Chauvin A., Yin H. BQP35 is a novel member of the intrinsically unstructured protein (IUP) family which is a potential antigen for the sero-diagnosis of Babesia sp. BQ1 (Lintan) infection. Vet. Parasitol. 2012, 187:421-430.
    • (2012) Vet. Parasitol. , vol.187 , pp. 421-430
    • Guan, G.1    Moreau, E.2    Liu, J.3    Ma, M.4    Rogniaux, H.5    Liu, A.6    Niu, Q.7    Li, Y.8    Ren, Q.9    Luo, J.10    Chauvin, A.11    Yin, H.12
  • 15
    • 0025879301 scopus 로고
    • Subunit III of cytochrome c oxidase is not involved in proton translocation: a site-directed mutagenesis study
    • Haltia T., Saraste M., Wikstrom M. Subunit III of cytochrome c oxidase is not involved in proton translocation: a site-directed mutagenesis study. Embo J. 1991, 10:2015-2021.
    • (1991) Embo J. , vol.10 , pp. 2015-2021
    • Haltia, T.1    Saraste, M.2    Wikstrom, M.3
  • 17
    • 0035986875 scopus 로고    scopus 로고
    • Rodent phylogeny and a timescale for the evolution of Glires: evidence from an extensive taxon sampling using three nuclear genes
    • Huchon D., Madsen O., Sibbald M.J., Ament K., Stanhope M.J., Catzeflis F., de Jong W.W., Douzery E.J. Rodent phylogeny and a timescale for the evolution of Glires: evidence from an extensive taxon sampling using three nuclear genes. Mol. Biol. Evol. 2002, 19:1053-1065.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 1053-1065
    • Huchon, D.1    Madsen, O.2    Sibbald, M.J.3    Ament, K.4    Stanhope, M.J.5    Catzeflis, F.6    de Jong, W.W.7    Douzery, E.J.8
  • 18
    • 79951949018 scopus 로고    scopus 로고
    • Rapid discrimination and quantification of Theileria orientalis types using ribosomal DNA internal transcribed spacers
    • Kamau J., Salim B., Yokoyama N., Kinyanjui P., Sugimoto C. Rapid discrimination and quantification of Theileria orientalis types using ribosomal DNA internal transcribed spacers. Infect. Genet. Evol. 2011, 11:407-414.
    • (2011) Infect. Genet. Evol. , vol.11 , pp. 407-414
    • Kamau, J.1    Salim, B.2    Yokoyama, N.3    Kinyanjui, P.4    Sugimoto, C.5
  • 21
    • 0142090672 scopus 로고    scopus 로고
    • Experimental transmission of an unnamed bovine Babesia by Hyalomma spp., Haemaphysalis longicornis and Boophilus microplus
    • Luo J., Chen F., Lu W., Guan G., Ma M., Yin H. Experimental transmission of an unnamed bovine Babesia by Hyalomma spp., Haemaphysalis longicornis and Boophilus microplus. Vet. Parasitol. 2003, 116:115-124.
    • (2003) Vet. Parasitol. , vol.116 , pp. 115-124
    • Luo, J.1    Chen, F.2    Lu, W.3    Guan, G.4    Ma, M.5    Yin, H.6
  • 23
    • 13644260609 scopus 로고    scopus 로고
    • A comparison of small-subunit ribosomal RNA gene sequences of bovine Babesia species transmitted by Haemaphysalis spp. in China
    • Luo J., Yin H., Guan G., Yang D., Liu A., Ma M., Liu Z., Dang Z., Liu G., Bai Q., Lu W., Chen P. A comparison of small-subunit ribosomal RNA gene sequences of bovine Babesia species transmitted by Haemaphysalis spp. in China. Parasitol. Res. 2005, 95:145-149.
    • (2005) Parasitol. Res. , vol.95 , pp. 145-149
    • Luo, J.1    Yin, H.2    Guan, G.3    Yang, D.4    Liu, A.5    Ma, M.6    Liu, Z.7    Dang, Z.8    Liu, G.9    Bai, Q.10    Lu, W.11    Chen, P.12
  • 24
    • 41049117759 scopus 로고    scopus 로고
    • A three-genome phylogeny of malaria parasites (Plasmodium and closely related genera): evolution of life-history traits and host switches
    • Martinsen E.S., Perkins S.L., Schall J.J. A three-genome phylogeny of malaria parasites (Plasmodium and closely related genera): evolution of life-history traits and host switches. Mol. Phylogent. Evol. 2008, 47:261-273.
    • (2008) Mol. Phylogent. Evol. , vol.47 , pp. 261-273
    • Martinsen, E.S.1    Perkins, S.L.2    Schall, J.J.3
  • 25
    • 0034350422 scopus 로고    scopus 로고
    • More taxa or more characters revisited: combining data from nuclear protein-encoding genes for phylogenetic analyses of Noctuoidea (Insecta: Lepidoptera)
    • Mitchell A., Mitter C., Regier J.C. More taxa or more characters revisited: combining data from nuclear protein-encoding genes for phylogenetic analyses of Noctuoidea (Insecta: Lepidoptera). Syst. Biol. 2000, 49:202-224.
    • (2000) Syst. Biol. , vol.49 , pp. 202-224
    • Mitchell, A.1    Mitter, C.2    Regier, J.C.3
  • 26
    • 57049163498 scopus 로고    scopus 로고
    • Differentiation of two ovine Babesia based on the ribosomal DNA internal transcribed spacer (ITS) sequences
    • Niu Q., Luo J., Guan G., Liu Z., Ma M., Liu A., Gao J., Ren Q., Li Y., Qiu J., Yin H. Differentiation of two ovine Babesia based on the ribosomal DNA internal transcribed spacer (ITS) sequences. Exp. Parasitol. 2009, 121:64-68.
    • (2009) Exp. Parasitol. , vol.121 , pp. 64-68
    • Niu, Q.1    Luo, J.2    Guan, G.3    Liu, Z.4    Ma, M.5    Liu, A.6    Gao, J.7    Ren, Q.8    Li, Y.9    Qiu, J.10    Yin, H.11
  • 28
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3
  • 29
    • 0027968068 scopus 로고
    • Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties, and weight matrix choice
    • Thompson J.D., Higgins D.G., Gibson T.J., Clustal W. Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties, and weight matrix choice. Nucleic Acids Res. 1994, 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3    Clustal, W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.