메뉴 건너뛰기




Volumn 121, Issue 6, 2013, Pages 467-477

Methanogenic archaea in subgingival sites: A review

Author keywords

Diversity; Methanogenic archaea; Periodontal pathogen; Periodontitis; Severity

Indexed keywords

BACTERIUM DETECTION; DISEASE ASSOCIATION; FOLLOW UP; HUMAN; METHANOBREVIBACTER ORALIS; METHANOGENIC ARCHAEON; NONHUMAN; PATHOGENICITY; PERIODONTAL POCKET; PERIODONTITIS; PRIORITY JOURNAL; REVIEW;

EID: 84878239550     PISSN: 09034641     EISSN: 16000463     Source Type: Journal    
DOI: 10.1111/apm.12015     Document Type: Review
Times cited : (61)

References (46)
  • 1
    • 0001271789 scopus 로고
    • Phylogenetic structure of the prokaryotic domain: the primary kingdoms
    • Woese CR, Fox GE. Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proc Natl Acad Sci USA 1977;74:5088-90.
    • (1977) Proc Natl Acad Sci USA , vol.74 , pp. 5088-5090
    • Woese, C.R.1    Fox, G.E.2
  • 2
    • 0031945225 scopus 로고    scopus 로고
    • Cell wall polymers in Archaea (Archaebacteria)
    • Kandler O, Konig H. Cell wall polymers in Archaea (Archaebacteria). Cell Mol Life Sci 1998;54:305-8.
    • (1998) Cell Mol Life Sci , vol.54 , pp. 305-308
    • Kandler, O.1    Konig, H.2
  • 3
    • 33947425547 scopus 로고    scopus 로고
    • Biosynthesis of ether-type polar lipids in archaea and evolutionary considerations
    • Koga Y, Morii H. Biosynthesis of ether-type polar lipids in archaea and evolutionary considerations. Microbiol Mol Biol Rev 2007;71:97-120.
    • (2007) Microbiol Mol Biol Rev , vol.71 , pp. 97-120
    • Koga, Y.1    Morii, H.2
  • 5
    • 78649934045 scopus 로고    scopus 로고
    • Phylogenetic and phyletic studies of informational genes in genomes highlight existence of a 4 domain of life including giant viruses
    • Boyer M, Madoui MA, Gimenez G, La Scola B, Raoult D. Phylogenetic and phyletic studies of informational genes in genomes highlight existence of a 4 domain of life including giant viruses. PLoS ONE 2010;5:e15530.
    • (2010) PLoS ONE , vol.5
    • Boyer, M.1    Madoui, M.A.2    Gimenez, G.3    La Scola, B.4    Raoult, D.5
  • 7
    • 0021921541 scopus 로고
    • Methanosphaera stadtmaniae gen-nov, sp-nov - A species that forms methane by reducing methanol with hydrogen
    • Miller TL, Wolin MJ. Methanosphaera stadtmaniae gen-nov, sp-nov - A species that forms methane by reducing methanol with hydrogen. Arch Microbiol 1985;141:116-22.
    • (1985) Arch Microbiol , vol.141 , pp. 116-122
    • Miller, T.L.1    Wolin, M.J.2
  • 8
    • 84864677092 scopus 로고    scopus 로고
    • Methanomassiliicoccus luminyensis, gen. nov., sp. nov., isolated from the human gut microbiota
    • Dridi B, Fardeau ML, Ollivier B, Raoult D, Drancourt M. Methanomassiliicoccus luminyensis, gen. nov., sp. nov., isolated from the human gut microbiota. Int J Syst Evol Microbiol 2012;62:1902-7.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 1902-1907
    • Dridi, B.1    Fardeau, M.L.2    Ollivier, B.3    Raoult, D.4    Drancourt, M.5
  • 9
    • 70349408423 scopus 로고    scopus 로고
    • High prevalence of Methanobrevibacter smithii and Methanosphaera stadtmanae detected in the human gut using an improved DNA detection protocol
    • Dridi B, Henry M, El Khechine A, Raoult D, Drancourt M. High prevalence of Methanobrevibacter smithii and Methanosphaera stadtmanae detected in the human gut using an improved DNA detection protocol. PLoS ONE 2009;4:e7063.
    • (2009) PLoS ONE , vol.4
    • Dridi, B.1    Henry, M.2    El Khechine, A.3    Raoult, D.4    Drancourt, M.5
  • 10
    • 84866178415 scopus 로고    scopus 로고
    • Age-related prevalence of Methanomassiliicoccus luminyensis in the human gut microbiome
    • Dridi B, Henry M, Richet H, Raoult D, Drancourt M. Age-related prevalence of Methanomassiliicoccus luminyensis in the human gut microbiome. APMIS 2012;120:773-7.
    • (2012) APMIS , vol.120 , pp. 773-777
    • Dridi, B.1    Henry, M.2    Richet, H.3    Raoult, D.4    Drancourt, M.5
  • 13
  • 15
    • 67649205482 scopus 로고    scopus 로고
    • Prevalence and molecular diversity of Archaea in subgingival pockets of periodontitis patients
    • Li CL, Liu DL, Jiang YT, Zhou YB, Zhang MZ, Jiang W, et al. Prevalence and molecular diversity of Archaea in subgingival pockets of periodontitis patients. Oral Microbiol Immunol 2009;24:343-6.
    • (2009) Oral Microbiol Immunol , vol.24 , pp. 343-346
    • Li, C.L.1    Liu, D.L.2    Jiang, Y.T.3    Zhou, Y.B.4    Zhang, M.Z.5    Jiang, W.6
  • 16
    • 79951895603 scopus 로고    scopus 로고
    • Has the use of molecular methods for the characterization of the human oral microbiome changed our understanding of the role of bacteria in the pathogenesis of periodontal disease?
    • Wade WG. Has the use of molecular methods for the characterization of the human oral microbiome changed our understanding of the role of bacteria in the pathogenesis of periodontal disease? J Clin Periodontol 2011;38(Suppl 11):7-16.
    • (2011) J Clin Periodontol , vol.38 , Issue.SUPPL 11 , pp. 7-16
    • Wade, W.G.1
  • 17
    • 79951923001 scopus 로고    scopus 로고
    • Periodontal infections: understanding the complexity -consensus of the Seventh European Workshop on Periodontology
    • Sanz M, van Winkelhoff AJ. Periodontal infections: understanding the complexity -consensus of the Seventh European Workshop on Periodontology. J Clin Periodontol 2011;38(Suppl 11):3-6.
    • (2011) J Clin Periodontol , vol.38 , Issue.SUPPL 11 , pp. 3-6
    • Sanz, M.1    van Winkelhoff, A.J.2
  • 18
    • 50249133685 scopus 로고    scopus 로고
    • Peri-implant diseases: consensus Report of the Sixth European Workshop on Periodontology
    • Lindhe J, Meyle J. Peri-implant diseases: consensus Report of the Sixth European Workshop on Periodontology. J Clin Periodontol 2008;35(Suppl 8):282-5.
    • (2008) J Clin Periodontol , vol.35 , Issue.SUPPL 8 , pp. 282-285
    • Lindhe, J.1    Meyle, J.2
  • 19
    • 77953173748 scopus 로고    scopus 로고
    • Profiling of subgingival plaque biofilm microflora from periodontally healthy subjects and from subjects with periodontitis using quantitative real-time PCR
    • Abiko Y, Sato T, Mayanagi G, Takahashi N. Profiling of subgingival plaque biofilm microflora from periodontally healthy subjects and from subjects with periodontitis using quantitative real-time PCR. J Periodontal Res 2010;45:389-95.
    • (2010) J Periodontal Res , vol.45 , pp. 389-395
    • Abiko, Y.1    Sato, T.2    Mayanagi, G.3    Takahashi, N.4
  • 20
    • 20444471123 scopus 로고    scopus 로고
    • Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia: the 'red complex', a prototype polybacterial pathogenic consortium in periodontitis
    • Holt SC, Ebersole JL. Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia: the 'red complex', a prototype polybacterial pathogenic consortium in periodontitis. Periodontol 2000 2005;38:72-122.
    • (2005) Periodontol 2000 , vol.38 , pp. 72-122
    • Holt, S.C.1    Ebersole, J.L.2
  • 21
    • 47049110230 scopus 로고    scopus 로고
    • Quantitative analysis of three hydrogenotrophic microbial groups, methanogenic archaea, sulfate-reducing bacteria, and acetogenic bacteria, within plaque biofilms associated with human periodontal disease
    • Vianna ME, Holtgraewe S, Seyfarth I, Conrads G, Horz HP. Quantitative analysis of three hydrogenotrophic microbial groups, methanogenic archaea, sulfate-reducing bacteria, and acetogenic bacteria, within plaque biofilms associated with human periodontal disease. J Bacteriol 2008;190:3779-85.
    • (2008) J Bacteriol , vol.190 , pp. 3779-3785
    • Vianna, M.E.1    Holtgraewe, S.2    Seyfarth, I.3    Conrads, G.4    Horz, H.P.5
  • 22
    • 50949120461 scopus 로고    scopus 로고
    • Distribution of Archaea in Japanese patients with periodontitis and humoral immune response to the components
    • Yamabe K, Maeda H, Kokeguchi S, Tanimoto I, Sonoi N, Asakawa S, et al. Distribution of Archaea in Japanese patients with periodontitis and humoral immune response to the components. FEMS Microbiol Lett 2008;287:69-75.
    • (2008) FEMS Microbiol Lett , vol.287 , pp. 69-75
    • Yamabe, K.1    Maeda, H.2    Kokeguchi, S.3    Tanimoto, I.4    Sonoi, N.5    Asakawa, S.6
  • 23
    • 79954969732 scopus 로고    scopus 로고
    • Prevalence and microbiological diversity of Archaea in peri-implantitis subjects by 16S ribosomal RNA clonal analysis
    • Faveri M, Goncalves LF, Feres M, Figueiredo LC, Gouveia LA, Shibli JA, et al. Prevalence and microbiological diversity of Archaea in peri-implantitis subjects by 16S ribosomal RNA clonal analysis. J Periodontal Res 2011;46:338-44.
    • (2011) J Periodontal Res , vol.46 , pp. 338-344
    • Faveri, M.1    Goncalves, L.F.2    Feres, M.3    Figueiredo, L.C.4    Gouveia, L.A.5    Shibli, J.A.6
  • 24
    • 79958292341 scopus 로고    scopus 로고
    • Diversity and quantitative analysis of Archaea in aggressive periodontitis and periodontally healthy subjects
    • Matarazzo F, Ribeiro AC, Feres M, Faveri M, Mayer MP. Diversity and quantitative analysis of Archaea in aggressive periodontitis and periodontally healthy subjects. J Clin Periodontol 2011;38:621-7.
    • (2011) J Clin Periodontol , vol.38 , pp. 621-627
    • Matarazzo, F.1    Ribeiro, A.C.2    Feres, M.3    Faveri, M.4    Mayer, M.P.5
  • 27
    • 0035868579 scopus 로고    scopus 로고
    • Identification of archaeal rDNA from subgingival dental plaque by PCR amplification and sequence analysis
    • Kulik EM, Sandmeier H, Hinni K, Meyer J. Identification of archaeal rDNA from subgingival dental plaque by PCR amplification and sequence analysis. FEMS Microbiol Lett 2001;196:129-33.
    • (2001) FEMS Microbiol Lett , vol.196 , pp. 129-133
    • Kulik, E.M.1    Sandmeier, H.2    Hinni, K.3    Meyer, J.4
  • 28
    • 0041853777 scopus 로고    scopus 로고
    • Methanogenic activity in human periodontal pocket
    • Robichaux M, Howell M, Boopathy R. Methanogenic activity in human periodontal pocket. Curr Microbiol 2003;46:53-8.
    • (2003) Curr Microbiol , vol.46 , pp. 53-58
    • Robichaux, M.1    Howell, M.2    Boopathy, R.3
  • 29
    • 84861909621 scopus 로고    scopus 로고
    • McrA and 16S rRNA gene analysis suggests a novel lineage of Archaea phylogenetically affiliated with Thermoplasmatales in human subgingival plaque
    • Horz HP, Seyfarth I, Conrads G. McrA and 16S rRNA gene analysis suggests a novel lineage of Archaea phylogenetically affiliated with Thermoplasmatales in human subgingival plaque. Anaerobe 2012;18:373-7.
    • (2012) Anaerobe , vol.18 , pp. 373-377
    • Horz, H.P.1    Seyfarth, I.2    Conrads, G.3
  • 30
    • 68949212363 scopus 로고    scopus 로고
    • T-RFLP-based mcrA gene analysis of methanogenic archaea in association with oral infections and evidence of a novel Methanobrevibacter phylotype
    • Vianna ME, Conrads G, Gomes BPFA, Horz HP. T-RFLP-based mcrA gene analysis of methanogenic archaea in association with oral infections and evidence of a novel Methanobrevibacter phylotype. Oral Microbiol Immunol 2009;24:417-22.
    • (2009) Oral Microbiol Immunol , vol.24 , pp. 417-422
    • Vianna, M.E.1    Conrads, G.2    Gomes, B.P.F.A.3    Horz, H.P.4
  • 31
    • 0037824578 scopus 로고    scopus 로고
    • Growth and activities of sulfate-reducing and methanogenic bacteria in human oral cavity
    • Robichaux M, Howell M, Boopathy R. Growth and activities of sulfate-reducing and methanogenic bacteria in human oral cavity. Curr Microbiol 2003;47:12-6.
    • (2003) Curr Microbiol , vol.47 , pp. 12-16
    • Robichaux, M.1    Howell, M.2    Boopathy, R.3
  • 32
    • 0012580007 scopus 로고
    • American Academy of Periodontology., 4th edn. Chicago, IL: American Academy of Periodontology
    • American Academy of Periodontology. Current Procedural Terminology for Periodontitics, 4th edn. Chicago, IL: American Academy of Periodontology, 1977: 20 p.
    • (1977) Current Procedural Terminology for Periodontitics , pp. 20
  • 33
    • 77953220795 scopus 로고    scopus 로고
    • Comparison of the microbiological features of chronic and aggressive periodontitis
    • Armitage GC. Comparison of the microbiological features of chronic and aggressive periodontitis. Periodontol 2000 2010;53:70-88.
    • (2010) Periodontol 2000 , vol.53 , pp. 70-88
    • Armitage, G.C.1
  • 34
    • 0018632865 scopus 로고
    • Criteria for the infectious agents in dental caries and periodontal disease
    • Socransky SS. Criteria for the infectious agents in dental caries and periodontal disease. J Clin Periodontol 1979;6:16-21.
    • (1979) J Clin Periodontol , vol.6 , pp. 16-21
    • Socransky, S.S.1
  • 35
    • 77949404707 scopus 로고    scopus 로고
    • Antigenic group II chaperonin in Methanobrevibacter oralis may cross-react with human chaperonin CCT
    • Yamabe K, Maeda H, Kokeguchi S, Soga Y, Meguro M, Naruishi K, et al. Antigenic group II chaperonin in Methanobrevibacter oralis may cross-react with human chaperonin CCT. Mol Oral Microbiol 2010;25:112-22.
    • (2010) Mol Oral Microbiol , vol.25 , pp. 112-122
    • Yamabe, K.1    Maeda, H.2    Kokeguchi, S.3    Soga, Y.4    Meguro, M.5    Naruishi, K.6
  • 36
    • 84862233998 scopus 로고    scopus 로고
    • Molecular analysis of 16S rRNA genes identifies potentially periodontal pathogenic bacteria and archaea in the plaque of partially erupted third molars
    • Mansfield JM, Campbell JH, Bhandari AR, Jesionowski AM, Vickerman MM. Molecular analysis of 16S rRNA genes identifies potentially periodontal pathogenic bacteria and archaea in the plaque of partially erupted third molars. J Oral Maxillofac Surg 2012;70:1507-14.
    • (2012) J Oral Maxillofac Surg , vol.70 , pp. 1507-1514
    • Mansfield, J.M.1    Campbell, J.H.2    Bhandari, A.R.3    Jesionowski, A.M.4    Vickerman, M.M.5
  • 37
    • 79959970982 scopus 로고    scopus 로고
    • Does routine analysis of subgingival microbiota in periodontitis contribute to patient benefit?
    • Mostajo M, Zaura E, Crielaard W, Beertsen W. Does routine analysis of subgingival microbiota in periodontitis contribute to patient benefit? Eur J Oral Sci 2011;119:259-64.
    • (2011) Eur J Oral Sci , vol.119 , pp. 259-264
    • Mostajo, M.1    Zaura, E.2    Crielaard, W.3    Beertsen, W.4
  • 39
    • 10444225916 scopus 로고    scopus 로고
    • Methods of detection of Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis and Tannerella forsythensis in periodontal microbiology, with special emphasis on advanced molecular techniques: a review
    • Sanz M, Lau L, Herrera D, Morillo JM, Silva A. Methods of detection of Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis and Tannerella forsythensis in periodontal microbiology, with special emphasis on advanced molecular techniques: a review. J Clin Periodontol 2004;31:1034-47.
    • (2004) J Clin Periodontol , vol.31 , pp. 1034-1047
    • Sanz, M.1    Lau, L.2    Herrera, D.3    Morillo, J.M.4    Silva, A.5
  • 40
    • 84861342868 scopus 로고    scopus 로고
    • Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing
    • Griffen AL, Beall CJ, Campbell JH, Firestone ND, Kumar PS, Yang ZK, et al. Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing. ISME J 2012;6:1176-85.
    • (2012) ISME J , vol.6 , pp. 1176-1185
    • Griffen, A.L.1    Beall, C.J.2    Campbell, J.H.3    Firestone, N.D.4    Kumar, P.S.5    Yang, Z.K.6
  • 41
    • 79959677258 scopus 로고    scopus 로고
    • Target region selection is a critical determinant of community fingerprints generated by 16S pyrosequencing
    • Kumar PS, Brooker MR, Dowd SE, Camerlengo T. Target region selection is a critical determinant of community fingerprints generated by 16S pyrosequencing. PLoS ONE 2011;6:e20956.
    • (2011) PLoS ONE , vol.6
    • Kumar, P.S.1    Brooker, M.R.2    Dowd, S.E.3    Camerlengo, T.4
  • 42
    • 84859751086 scopus 로고    scopus 로고
    • Pyrosequencing reveals unique microbial signatures associated with healthy and failing dental implants
    • Kumar PS, Mason MR, Brooker MR, O'Brien K. Pyrosequencing reveals unique microbial signatures associated with healthy and failing dental implants. J Clin Periodontol 2012;39:425-33.
    • (2012) J Clin Periodontol , vol.39 , pp. 425-433
    • Kumar, P.S.1    Mason, M.R.2    Brooker, M.R.3    O'Brien, K.4
  • 43
    • 0027310293 scopus 로고
    • Tetracycline resistance in periodontal pathogens
    • Olsvik B, Tenover FC. Tetracycline resistance in periodontal pathogens. Clin Infect Dis 1993;16(Suppl 4):S310-3.
    • (1993) Clin Infect Dis , vol.16 , Issue.SUPPL 4
    • Olsvik, B.1    Tenover, F.C.2
  • 44
    • 0029298384 scopus 로고
    • Tetracycline-resistant micro-organisms recovered from patients with refractory periodontal disease
    • Olsvik B, Hansen BF, Tenover FC, Olsen I. Tetracycline-resistant micro-organisms recovered from patients with refractory periodontal disease. J Clin Periodontol 1995;22:391-6.
    • (1995) J Clin Periodontol , vol.22 , pp. 391-396
    • Olsvik, B.1    Hansen, B.F.2    Tenover, F.C.3    Olsen, I.4
  • 45
    • 80051703060 scopus 로고    scopus 로고
    • The antimicrobial resistance pattern of cultured human methanogens reflects the unique phylogenetic position of archaea
    • Dridi B, Fardeau ML, Ollivier B, Raoult D, Drancourt M. The antimicrobial resistance pattern of cultured human methanogens reflects the unique phylogenetic position of archaea. J Antimicrob Chemother 2011;66:2038-44.
    • (2011) J Antimicrob Chemother , vol.66 , pp. 2038-2044
    • Dridi, B.1    Fardeau, M.L.2    Ollivier, B.3    Raoult, D.4    Drancourt, M.5
  • 46
    • 80051781995 scopus 로고    scopus 로고
    • Clinical and microbiological benefits of metronidazole alone or with amoxicillin as adjuncts in the treatment of chronic periodontitis: a randomized placebo-controlled clinical trial
    • Silva MP, Feres M, Oliveira Sirotto TA, Silva Soares GM, Velloso Mendes JA, Faveri M, et al. Clinical and microbiological benefits of metronidazole alone or with amoxicillin as adjuncts in the treatment of chronic periodontitis: a randomized placebo-controlled clinical trial. J Clin Periodontol 2011;38:828-37.
    • (2011) J Clin Periodontol , vol.38 , pp. 828-837
    • Silva, M.P.1    Feres, M.2    Oliveira Sirotto, T.A.3    Silva Soares, G.M.4    Velloso Mendes, J.A.5    Faveri, M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.