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Volumn 114, Issue 6, 2013, Pages 1843-1853

Human calicivirus diversity in wastewater in south africa

Author keywords

Genotypes; Norovirus; Sapovirus; Sewage; South Africa; Wastewater

Indexed keywords

BIOTECHNOLOGY; MICROBIOLOGY;

EID: 84878150823     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/jam.12167     Document Type: Article
Times cited : (48)

References (58)
  • 2
    • 77954759982 scopus 로고    scopus 로고
    • Noroviruses - State of the art
    • Atmar, R.L. (2010) Noroviruses - State of the art. Food Environ Virol 2, 117-126.
    • (2010) Food Environ Virol , vol.2 , pp. 117-126
    • Atmar, R.L.1
  • 3
    • 77954464055 scopus 로고    scopus 로고
    • Environmental surveillance and molecular characterization of human enteric viruses in tropical urban wastewaters
    • Aw, T.G. and Gin, K.Y. (2010) Environmental surveillance and molecular characterization of human enteric viruses in tropical urban wastewaters. J Appl Microbiol 109, 716-730.
    • (2010) J Appl Microbiol , vol.109 , pp. 716-730
    • Aw, T.G.1    Gin, K.Y.2
  • 5
    • 84865574324 scopus 로고    scopus 로고
    • Environmental surveillance of norovirus in Argentina revealed distinct viral diversity patterns, seasonality and spatio-temporal diffusion processes
    • Blanco Fernandez, M.D., Torres, C., Poma, H.R., Riviello-Lopez, G., Martinez, L.C., Cisterna, D.M., Rajal, V.B., Nates, S.V. et al. (2012) Environmental surveillance of norovirus in Argentina revealed distinct viral diversity patterns, seasonality and spatio-temporal diffusion processes. Sci Total Environ 437, 262-269.
    • (2012) Sci Total Environ , vol.437 , pp. 262-269
    • Blanco Fernandez, M.D.1    Torres, C.2    Poma, H.R.3    Riviello-Lopez, G.4    Martinez, L.C.5    Cisterna, D.M.6    Rajal, V.B.7    Nates, S.V.8
  • 6
    • 80053928144 scopus 로고    scopus 로고
    • Low prevalence of rotavirus and high prevalence of norovirus in hospital and community wastewater after introduction of rotavirus vaccine in Nicaragua
    • Bucardo, F., Lindgren, P.E., Svensson, L. and Nordgren, J. (2011) Low prevalence of rotavirus and high prevalence of norovirus in hospital and community wastewater after introduction of rotavirus vaccine in Nicaragua. PLoS One 6, e25962.
    • (2011) PLoS One , vol.6
    • Bucardo, F.1    Lindgren, P.E.2    Svensson, L.3    Nordgren, J.4
  • 8
    • 85153149665 scopus 로고    scopus 로고
    • European Committee for Standardization (CEN) Technical Committee 275 () CEN/TC 275/WG6/TAG4 - Detection of viruses in food and water.
    • European Committee for Standardization (CEN) Technical Committee 275 (2010) CEN/TC 275/WG6/TAG4 - Detection of viruses in food and water.
    • (2010)
  • 9
    • 0036642439 scopus 로고    scopus 로고
    • Epidemiologic and molecular trends of "Norwalk-like Viruses" associated with outbreaks of gastroenteritis in the United States
    • Fankhauser, R.L., Monroe, S.S., Noel, J.S., Humphrey, C.D., Bresee, J.S., Parashar, U.D., Ando, T. and Glass, R.I. (2002) Epidemiologic and molecular trends of "Norwalk-like Viruses" associated with outbreaks of gastroenteritis in the United States. J Infect Dis 186, 1-7.
    • (2002) J Infect Dis , vol.186 , pp. 1-7
    • Fankhauser, R.L.1    Monroe, S.S.2    Noel, J.S.3    Humphrey, C.D.4    Bresee, J.S.5    Parashar, U.D.6    Ando, T.7    Glass, R.I.8
  • 12
    • 34548415971 scopus 로고    scopus 로고
    • Caliciviridae: the noroviruses
    • ed. Knipe, D.M., Howley, P.M., Griffin, D.E., Lamb, R.A., Martin, M.A., Roizman, B. and SE, S. Philadelphia: Lippincott Williams & Wilkins.
    • Green, K. (2007) Caliciviridae: the noroviruses. In Field's Virology ed. Knipe, D.M., Howley, P.M., Griffin, D.E., Lamb, R.A., Martin, M.A., Roizman, B. and SE, S. pp. 949-979. Philadelphia: Lippincott Williams & Wilkins.
    • (2007) Field's Virology , pp. 949-979
    • Green, K.1
  • 14
    • 84867143748 scopus 로고    scopus 로고
    • A confirmation of sapovirus re-infection gastroenteritis cases with different genogroups and genetic shifts in the evolving sapovirus genotypes, 2002-2011
    • Harada, S., Oka, T., Tokuoka, E., Kiyota, N., Nishimura, K., Shimada, Y., Ueno, T., Ikezawa, S. et al. (2012) A confirmation of sapovirus re-infection gastroenteritis cases with different genogroups and genetic shifts in the evolving sapovirus genotypes, 2002-2011. Arch Virol 157, 1999-2003.
    • (2012) Arch Virol , vol.157 , pp. 1999-2003
    • Harada, S.1    Oka, T.2    Tokuoka, E.3    Kiyota, N.4    Nishimura, K.5    Shimada, Y.6    Ueno, T.7    Ikezawa, S.8
  • 15
    • 80052941236 scopus 로고    scopus 로고
    • One-year monthly survey of rotavirus, astrovirus and norovirus in three sewage treatment plants (STPs) in Beijing, China and associated health risk assessment
    • He, X.Q., Cheng, L., Zhang, D.Y., Xie, X.M., Wang, D.H. and Wang, Z. (2011) One-year monthly survey of rotavirus, astrovirus and norovirus in three sewage treatment plants (STPs) in Beijing, China and associated health risk assessment. Water Sci Technol 64, 1202-1210.
    • (2011) Water Sci Technol , vol.64 , pp. 1202-1210
    • He, X.Q.1    Cheng, L.2    Zhang, D.Y.3    Xie, X.M.4    Wang, D.H.5    Wang, Z.6
  • 16
    • 80054043113 scopus 로고    scopus 로고
    • Influence of wastewater treatment process and the population size on human virus profiles in wastewater
    • Hewitt, J., Leonard, M., Greening, G.E. and Lewis, G.D. (2011) Influence of wastewater treatment process and the population size on human virus profiles in wastewater. Water Res 45, 6267-6276.
    • (2011) Water Res , vol.45 , pp. 6267-6276
    • Hewitt, J.1    Leonard, M.2    Greening, G.E.3    Lewis, G.D.4
  • 17
    • 61649113545 scopus 로고    scopus 로고
    • Continuous Presence of Noroviruses and Sapoviruses in Raw Sewage Reflects Infections among Inhabitants of Toyama, Japan (2006 to 2008)
    • Iwai, M., Hasegawa, S., Obara, M., Nakamura, K., Horimoto, E., Takizawa, T., Kurata, T., Sogen, S. et al. (2009) Continuous Presence of Noroviruses and Sapoviruses in Raw Sewage Reflects Infections among Inhabitants of Toyama, Japan (2006 to 2008). Appl Environ Microbiol 75, 1264-1270.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 1264-1270
    • Iwai, M.1    Hasegawa, S.2    Obara, M.3    Nakamura, K.4    Horimoto, E.5    Takizawa, T.6    Kurata, T.7    Sogen, S.8
  • 18
    • 72049083997 scopus 로고    scopus 로고
    • Genetic diversity of sapovirus infections in Danish children 2005-2007
    • Johnsen, C.K., Midgley, S. and Böttiger, B. (2009) Genetic diversity of sapovirus infections in Danish children 2005-2007. J Clin Virol 46, 265-269.
    • (2009) J Clin Virol , vol.46 , pp. 265-269
    • Johnsen, C.K.1    Midgley, S.2    Böttiger, B.3
  • 19
    • 0037388633 scopus 로고    scopus 로고
    • Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR
    • Kageyama, T., Kojima, S., Shinohara, M., Uchida, K., Fukushi, S., Hoshino, F.B., Takeda, N. and Katayama, K. (2003) Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR. J Clin Microbiol 41, 1548-1557.
    • (2003) J Clin Microbiol , vol.41 , pp. 1548-1557
    • Kageyama, T.1    Kojima, S.2    Shinohara, M.3    Uchida, K.4    Fukushi, S.5    Hoshino, F.B.6    Takeda, N.7    Katayama, K.8
  • 20
    • 77950651803 scopus 로고    scopus 로고
    • Evidence of the co-circulation of enteric viruses in sewage and in the population of Greater Cairo
    • Kamel, A.H., Ali, M.A., El-Nady, H.G., Aho, S., Pothier, P. and Belliot, G. (2010) Evidence of the co-circulation of enteric viruses in sewage and in the population of Greater Cairo. J Appl Microbiol 108, 1620-1629.
    • (2010) J Appl Microbiol , vol.108 , pp. 1620-1629
    • Kamel, A.H.1    Ali, M.A.2    El-Nady, H.G.3    Aho, S.4    Pothier, P.5    Belliot, G.6
  • 21
    • 85027946962 scopus 로고    scopus 로고
    • Detection and molecular characterisation of rotavirus and norovirus infections in Jordanian children with acute gastroenteritis
    • Kaplan, N.M., Kirby, A., Abd-Eldayem, S.A., Dove, W., Nakagomi, T., Nakagomi, O. and Cunliffe, N.A. (2011) Detection and molecular characterisation of rotavirus and norovirus infections in Jordanian children with acute gastroenteritis. Arch Virol 156, 1477-1480.
    • (2011) Arch Virol , vol.156 , pp. 1477-1480
    • Kaplan, N.M.1    Kirby, A.2    Abd-Eldayem, S.A.3    Dove, W.4    Nakagomi, T.5    Nakagomi, O.6    Cunliffe, N.A.7
  • 22
  • 24
    • 79960103187 scopus 로고    scopus 로고
    • Genotype distribution of human sapoviruses in wastewater in Japan
    • Kitajima, M., Haramoto, E., Phanuwan, C. and Katayama, H. (2011) Genotype distribution of human sapoviruses in wastewater in Japan. Appl Environ Microbiol 77, 4226-4229.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 4226-4229
    • Kitajima, M.1    Haramoto, E.2    Phanuwan, C.3    Katayama, H.4
  • 25
    • 84856961982 scopus 로고    scopus 로고
    • Molecular detection and genotyping of human noroviruses in influent and effluent water at a wastewater treatment plant in Japan
    • Kitajima, M., Haramoto, E., Phanuwan, C., Katayama, H. and Furumai, H. (2012) Molecular detection and genotyping of human noroviruses in influent and effluent water at a wastewater treatment plant in Japan. J Appl Microbiol 112, 605-613.
    • (2012) J Appl Microbiol , vol.112 , pp. 605-613
    • Kitajima, M.1    Haramoto, E.2    Phanuwan, C.3    Katayama, H.4    Furumai, H.5
  • 28
    • 76949098739 scopus 로고    scopus 로고
    • Detection and molecular characterization of noroviruses from five sewage treatment plants in central Italy
    • La Rosa, G., Iaconelli, M., Pourshaban, M. and Muscillo, M. (2010a) Detection and molecular characterization of noroviruses from five sewage treatment plants in central Italy. Water Res 44, 1777-1784.
    • (2010) Water Res , vol.44 , pp. 1777-1784
    • La Rosa, G.1    Iaconelli, M.2    Pourshaban, M.3    Muscillo, M.4
  • 29
    • 77950601024 scopus 로고    scopus 로고
    • Molecular detection and genetic diversity of norovirus genogroup IV: a yearlong monitoring of sewage throughout Italy
    • La Rosa, G., Iaconelli, M., Pourshaban, M., Fratini, M. and Muscillo, M. (2010b) Molecular detection and genetic diversity of norovirus genogroup IV: a yearlong monitoring of sewage throughout Italy. Arch Virol 155, 589-593.
    • (2010) Arch Virol , vol.155 , pp. 589-593
    • La Rosa, G.1    Iaconelli, M.2    Pourshaban, M.3    Fratini, M.4    Muscillo, M.5
  • 31
    • 15444367292 scopus 로고    scopus 로고
    • Presence of noroviruses and other enteric viruses in sewage and surface waters in The Netherlands
    • Lodder, W.J. and de Roda Husman, A.M. (2005) Presence of noroviruses and other enteric viruses in sewage and surface waters in The Netherlands. Appl Environ Microbiol 71, 1453-1461.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 1453-1461
    • Lodder, W.J.1    de Roda Husman, A.M.2
  • 33
    • 78149498024 scopus 로고    scopus 로고
    • Emerging norovirus GII.4 2008 variant detected in hospitalised paediatric patients in South Africa
    • Mans, J., de Villiers, J.C., du Plessis, N.M., Avenant, T. and Taylor, M.B. (2010) Emerging norovirus GII.4 2008 variant detected in hospitalised paediatric patients in South Africa. J Clin Virol 49, 258-264.
    • (2010) J Clin Virol , vol.49 , pp. 258-264
    • Mans, J.1    de Villiers, J.C.2    du Plessis, N.M.3    Avenant, T.4    Taylor, M.B.5
  • 34
    • 84876902079 scopus 로고    scopus 로고
    • Diverse norovirus genotypes identified in sewage-polluted river water in South Africa
    • Mans, J., Netshikweta, R., Magwalivha, M., van Zyl, W.B. and Taylor, M.B. (2013) Diverse norovirus genotypes identified in sewage-polluted river water in South Africa. Epidemiol Infect 141, 303-313.
    • (2013) Epidemiol Infect , vol.141 , pp. 303-313
    • Mans, J.1    Netshikweta, R.2    Magwalivha, M.3    van Zyl, W.B.4    Taylor, M.B.5
  • 35
    • 0002429840 scopus 로고
    • Growth, assay and purification of picornaviruses
    • ed. Mahy, B.W.J. Washington: IRL Press.
    • Minor, P.D. (1985) Growth, assay and purification of picornaviruses. In Virology: A Practical Approach ed. Mahy, B.W.J. pp. 25-42. Washington: IRL Press.
    • (1985) Virology: A Practical Approach , pp. 25-42
    • Minor, P.D.1
  • 36
    • 76649110216 scopus 로고    scopus 로고
    • Different genotypic sapoviruses detected in two simultaneous outbreaks of gastroenteritis among schoolchildren in the same school district in Hokkaido, Japan
    • Miyoshi, M., Yoshizumi, S., Kanda, N., Karino, T., Nagano, H., Kudo, S., Okano, M. and Ishida, S. (2010) Different genotypic sapoviruses detected in two simultaneous outbreaks of gastroenteritis among schoolchildren in the same school district in Hokkaido, Japan. Jpn J Infect Dis 63, 75-78.
    • (2010) Jpn J Infect Dis , vol.63 , pp. 75-78
    • Miyoshi, M.1    Yoshizumi, S.2    Kanda, N.3    Karino, T.4    Nagano, H.5    Kudo, S.6    Okano, M.7    Ishida, S.8
  • 37
    • 84874809946 scopus 로고    scopus 로고
    • Application of a competitive internal amplification control for the detection of sapoviruses in wastewater
    • doi:10.1007/s12560-012-9101-1.
    • Murray, T.Y., Mans, J., van Zyl, W.B. and Taylor, M.B. (2012) Application of a competitive internal amplification control for the detection of sapoviruses in wastewater. Food Environ Virol doi:10.1007/s12560-012-9101-1.
    • (2012) Food Environ Virol
    • Murray, T.Y.1    Mans, J.2    van Zyl, W.B.3    Taylor, M.B.4
  • 38
    • 84857818735 scopus 로고    scopus 로고
    • Marked genomic diversity of norovirus genogroup I strains in a waterborne outbreak
    • Nenonen, N.P., Hannoun, C., Larsson, C.U. and Bergström, T. (2012) Marked genomic diversity of norovirus genogroup I strains in a waterborne outbreak. Appl Environ Microbiol 78, 1846-1852.
    • (2012) Appl Environ Microbiol , vol.78 , pp. 1846-1852
    • Nenonen, N.P.1    Hannoun, C.2    Larsson, C.U.3    Bergström, T.4
  • 40
    • 60549098405 scopus 로고    scopus 로고
    • Prevalence of norovirus and factors influencing virus concentrations during one year in a full-scale wastewater treatment plant
    • Nordgren, J., Matussek, A., Mattsson, A., Svensson, L. and Lindgren, P.E. (2009) Prevalence of norovirus and factors influencing virus concentrations during one year in a full-scale wastewater treatment plant. Water Res 43, 1117-1125.
    • (2009) Water Res , vol.43 , pp. 1117-1125
    • Nordgren, J.1    Matussek, A.2    Mattsson, A.3    Svensson, L.4    Lindgren, P.E.5
  • 41
  • 42
    • 84864125891 scopus 로고    scopus 로고
    • Molecular epidemiology of rotavirus and norovirus in Ile-Ife, Nigeria: high prevalence of G12P[8] rotavirus strains and detection of a rare norovirus genotype
    • Oluwatoyin, M.J., Adesina, O.A., Famurewa, O., Svensson, L. and Nordgren, J. (2012) Molecular epidemiology of rotavirus and norovirus in Ile-Ife, Nigeria: high prevalence of G12P[8] rotavirus strains and detection of a rare norovirus genotype. J Med Virol 84, 1489-1496.
    • (2012) J Med Virol , vol.84 , pp. 1489-1496
    • Oluwatoyin, M.J.1    Adesina, O.A.2    Famurewa, O.3    Svensson, L.4    Nordgren, J.5
  • 43
    • 84856581211 scopus 로고    scopus 로고
    • Human norovirus occurrence and diversity in the Llobregat river catchment, Spain
    • Perez-Sautu, U., Sano, D., Guix, S., Kasimir, G., Pinto, R.M. and Bosch, A. (2012) Human norovirus occurrence and diversity in the Llobregat river catchment, Spain. Environ Microbiol 14, 494-502.
    • (2012) Environ Microbiol , vol.14 , pp. 494-502
    • Perez-Sautu, U.1    Sano, D.2    Guix, S.3    Kasimir, G.4    Pinto, R.M.5    Bosch, A.6
  • 44
    • 2142659295 scopus 로고    scopus 로고
    • Human astrovirus, norovirus (GI, GII), and sapovirus infections in Pakistani children with diarrhea
    • Phan, T.G., Okame, M., Nguyen, T.A., Maneekarn, N., Nishio, O., Okitsu, S. and Ushijima, H. (2004) Human astrovirus, norovirus (GI, GII), and sapovirus infections in Pakistani children with diarrhea. J Med Virol 73, 256-261.
    • (2004) J Med Virol , vol.73 , pp. 256-261
    • Phan, T.G.1    Okame, M.2    Nguyen, T.A.3    Maneekarn, N.4    Nishio, O.5    Okitsu, S.6    Ushijima, H.7
  • 46
    • 77955840335 scopus 로고    scopus 로고
    • Detection and molecular characterization of enteric viruses in environmental samples in Monastir, Tunisia between January 2003 and April 2007
    • Sdiri-Loulizi, K., Hassine, M., Aouni, Z., Gharbi-Khelifi, H., Chouchane, S., Sakly, N., Neji-Guédiche, M., Pothier, P. et al. (2010) Detection and molecular characterization of enteric viruses in environmental samples in Monastir, Tunisia between January 2003 and April 2007. J Appl Microbiol 109, 1093-1104.
    • (2010) J Appl Microbiol , vol.109 , pp. 1093-1104
    • Sdiri-Loulizi, K.1    Hassine, M.2    Aouni, Z.3    Gharbi-Khelifi, H.4    Chouchane, S.5    Sakly, N.6    Neji-Guédiche, M.7    Pothier, P.8
  • 48
    • 70349315360 scopus 로고    scopus 로고
    • Norovirus illness is a global problem: emergence and spread of norovirus GII.4 variants, 2001-2007
    • Siebenga, J.J., Vennema, H., Zheng, D.P., Vinje, J., Lee, B.E., Pang, X.L., Ho, E.C., Lim, W. et al. (2009) Norovirus illness is a global problem: emergence and spread of norovirus GII.4 variants, 2001-2007. J Infect Dis 200, 802-812.
    • (2009) J Infect Dis , vol.200 , pp. 802-812
    • Siebenga, J.J.1    Vennema, H.2    Zheng, D.P.3    Vinje, J.4    Lee, B.E.5    Pang, X.L.6    Ho, E.C.7    Lim, W.8
  • 49
    • 37349023992 scopus 로고    scopus 로고
    • Evaluation of removal of noroviruses during wastewater treatment, using real-time reverse transcription-PCR: different behaviors of genogroups I and II
    • da Silva, A.K., Le Saux, J.C., Parnaudeau, S., Pommepuy, M., Elimelech, M. and Le Guyader, F.S. (2007) Evaluation of removal of noroviruses during wastewater treatment, using real-time reverse transcription-PCR: different behaviors of genogroups I and II. Appl Environ Microbiol 73, 7891-7897.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 7891-7897
    • da Silva, A.K.1    Le Saux, J.C.2    Parnaudeau, S.3    Pommepuy, M.4    Elimelech, M.5    Le Guyader, F.S.6
  • 52
    • 34248585861 scopus 로고    scopus 로고
    • Etiological role of viruses in outbreaks of acute gastroenteritis in The Netherlands from 1994 through 2005
    • Svraka, S., Duizer, E., Vennema, H., de Bruin, E., van der Veer, B., Dorresteijn, B. and Koopmans, M. (2007) Etiological role of viruses in outbreaks of acute gastroenteritis in The Netherlands from 1994 through 2005. J Clin Microbiol 45, 1389-1394.
    • (2007) J Clin Microbiol , vol.45 , pp. 1389-1394
    • Svraka, S.1    Duizer, E.2    Vennema, H.3    de Bruin, E.4    van der Veer, B.5    Dorresteijn, B.6    Koopmans, M.7
  • 57
    • 0033915525 scopus 로고    scopus 로고
    • Simultaneous detection and genotyping of "Norwalk-Like Viruses" by oligonucleotide array in a reverse line blot hybridization format
    • Vinjé, J. and Koopmans, M.P.G. (2000) Simultaneous detection and genotyping of "Norwalk-Like Viruses" by oligonucleotide array in a reverse line blot hybridization format. J Clin Microbiol 38, 2595-2601.
    • (2000) J Clin Microbiol , vol.38 , pp. 2595-2601
    • Vinjé, J.1    Koopmans, M.P.G.2


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