-
1
-
-
47549110972
-
Carbon catabolite repression in bacteria: many ways to make the most out of nutrients
-
Görke B, Stülke J, (2008) Carbon catabolite repression in bacteria: many ways to make the most out of nutrients. Nat Rev Microbiol 6: 613-624.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 613-624
-
-
Görke, B.1
Stülke, J.2
-
2
-
-
77955132055
-
Carbon catabolite repression in Pseudomonas: optimizing metabolic versatility and interactions with the environment
-
Rojo F, (2010) Carbon catabolite repression in Pseudomonas: optimizing metabolic versatility and interactions with the environment. FEMS Microbiol Rev 34: 658-684.
-
(2010)
FEMS Microbiol Rev
, vol.34
, pp. 658-684
-
-
Rojo, F.1
-
3
-
-
0024554141
-
Protein phosphorylation and allosteric control of inducer exclusion and catabolite repression by the bacterial phosphoenolpyruvate: sugar phosphotransferase system
-
Saier MH, (1989) Protein phosphorylation and allosteric control of inducer exclusion and catabolite repression by the bacterial phosphoenolpyruvate: sugar phosphotransferase system. Microbiol Rev 53: 109-120.
-
(1989)
Microbiol Rev
, vol.53
, pp. 109-120
-
-
Saier, M.H.1
-
4
-
-
0019433724
-
Cyclic adenosine 3′,5′-monophosphate levels in Pseudomonas putida and Pseudomonas aeruginosa during induction and carbon catabolite repression of histidase synthesis
-
Phillips AT, Mulfinger LM, (1981) Cyclic adenosine 3′,5′-monophosphate levels in Pseudomonas putida and Pseudomonas aeruginosa during induction and carbon catabolite repression of histidase synthesis. J Bacteriol 145: 1286-1292.
-
(1981)
J Bacteriol
, vol.145
, pp. 1286-1292
-
-
Phillips, A.T.1
Mulfinger, L.M.2
-
5
-
-
0017331204
-
Cyclic adenosine 3′,5′-monophosphate levels and activities of adenylate cyclase and cyclic adenosine 3′,5′-monophosphate phosphodiesterase in Pseudomonas and Bacteroides
-
Siegel LS, Hylemon PB, Phibbs PV, (1977) Cyclic adenosine 3′,5′-monophosphate levels and activities of adenylate cyclase and cyclic adenosine 3′,5′-monophosphate phosphodiesterase in Pseudomonas and Bacteroides. J Bacteriol 129: 87-96.
-
(1977)
J Bacteriol
, vol.129
, pp. 87-96
-
-
Siegel, L.S.1
Hylemon, P.B.2
Phibbs, P.V.3
-
6
-
-
0020065258
-
Fractionation and characterization of the phosphoenolpyruvate: fructose 1-phosphotransferase system from Pseudomonas aeruginosa
-
Durham DR, Phibbs PV, (1982) Fractionation and characterization of the phosphoenolpyruvate: fructose 1-phosphotransferase system from Pseudomonas aeruginosa. J Bacteriol 149: 534-541.
-
(1982)
J Bacteriol
, vol.149
, pp. 534-541
-
-
Durham, D.R.1
Phibbs, P.V.2
-
7
-
-
1342346618
-
The Pseudomonas putida Crc global regulator controls the expression of genes from several chromosomal catabolic pathways for aromatic compounds
-
Morales G, Linares JF, Beloso A, Albar JP, Martínez JL, et al. (2004) The Pseudomonas putida Crc global regulator controls the expression of genes from several chromosomal catabolic pathways for aromatic compounds. J Bacteriol 186: 1337-1344.
-
(2004)
J Bacteriol
, vol.186
, pp. 1337-1344
-
-
Morales, G.1
Linares, J.F.2
Beloso, A.3
Albar, J.P.4
Martínez, J.L.5
-
8
-
-
0025815884
-
Isolation and characterization of catabolite repression control mutants of Pseudomonas aeruginosa PAO
-
Wolff JA, MacGregor CH, Eisenberg RC, Phibbs PV, (1991) Isolation and characterization of catabolite repression control mutants of Pseudomonas aeruginosa PAO. J Bacteriol 173: 4700-4706.
-
(1991)
J Bacteriol
, vol.173
, pp. 4700-4706
-
-
Wolff, J.A.1
MacGregor, C.H.2
Eisenberg, R.C.3
Phibbs, P.V.4
-
9
-
-
84871936356
-
The translational repressor Crc controls the Pseudomonas putida benzoate and alkane catabolic pathways using a multi-tier regulation strategy
-
Hernández-Arranz S, Moreno R, Rojo F, (2012) The translational repressor Crc controls the Pseudomonas putida benzoate and alkane catabolic pathways using a multi-tier regulation strategy. Environ Microbiol 15: 227-241.
-
(2012)
Environ Microbiol
, vol.15
, pp. 227-241
-
-
Hernández-Arranz, S.1
Moreno, R.2
Rojo, F.3
-
10
-
-
0033989302
-
The global carbon metabolism regulator Crc is a component of a signal transduction pathway required for biofilm development by Pseudomonas aeruginosa
-
O'Toole GA, Gibbs KA, Hager PW, Phibbs PV Jr, Kolter R, (2000) The global carbon metabolism regulator Crc is a component of a signal transduction pathway required for biofilm development by Pseudomonas aeruginosa. J Bacteriol 182: 425-431.
-
(2000)
J Bacteriol
, vol.182
, pp. 425-431
-
-
O'Toole, G.A.1
Gibbs, K.A.2
Hager, P.W.3
Phibbs Jr., P.V.4
Kolter, R.5
-
11
-
-
78650070851
-
The global regulator Crc modulates metabolism, susceptibility to antibiotics and virulence in Pseudomonas aeruginosa
-
Linares JF, Moreno R, Fajardo A, Martínez-Solano L, Escalante R, et al. (2010) The global regulator Crc modulates metabolism, susceptibility to antibiotics and virulence in Pseudomonas aeruginosa. Environ Microbiol 12: 3196-3212.
-
(2010)
Environ Microbiol
, vol.12
, pp. 3196-3212
-
-
Linares, J.F.1
Moreno, R.2
Fajardo, A.3
Martínez-Solano, L.4
Escalante, R.5
-
12
-
-
84863760504
-
Catabolite repression control of pyocyanin biosynthesis at an intersection of primary and secondary metabolism in Pseudomonas aeruginosa
-
Huang J, Sonnleitner E, Ren B, Xu Y, Haas D, (2012) Catabolite repression control of pyocyanin biosynthesis at an intersection of primary and secondary metabolism in Pseudomonas aeruginosa. Appl Environ Microbiol 78: 5016-5020.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 5016-5020
-
-
Huang, J.1
Sonnleitner, E.2
Ren, B.3
Xu, Y.4
Haas, D.5
-
13
-
-
34247509259
-
The Pseudomonas putida Crc global regulator is an RNA binding protein that inhibits translation of the AlkS transcriptional regulator
-
Moreno R, Ruiz-Manzano A, Yuste L, Rojo F, (2007) The Pseudomonas putida Crc global regulator is an RNA binding protein that inhibits translation of the AlkS transcriptional regulator. Mol Microbiol 64: 665-675.
-
(2007)
Mol Microbiol
, vol.64
, pp. 665-675
-
-
Moreno, R.1
Ruiz-Manzano, A.2
Yuste, L.3
Rojo, F.4
-
14
-
-
75649099354
-
The Crc global regulator binds to an unpaired A-rich motif at the Pseudomonas putida alkS mRNA coding sequence and inhibits translation initiation
-
Moreno R, Marzi S, Romby P, Rojo F, (2009) The Crc global regulator binds to an unpaired A-rich motif at the Pseudomonas putida alkS mRNA coding sequence and inhibits translation initiation. Nucleic Acids Res 37: 7678-7690.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 7678-7690
-
-
Moreno, R.1
Marzi, S.2
Romby, P.3
Rojo, F.4
-
15
-
-
76049120271
-
Small RNA as global regulator of carbon catabolite repression in Pseudomonas aeruginosa
-
Sonnleitner E, Abdou L, Haas D, (2009) Small RNA as global regulator of carbon catabolite repression in Pseudomonas aeruginosa. Proc Natl Acad Sci U S A 106: 21866-21871.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 21866-21871
-
-
Sonnleitner, E.1
Abdou, L.2
Haas, D.3
-
16
-
-
84155165433
-
Two small RNAs, CrcY and CrcZ, act in concert to sequester the Crc global regulator in Pseudomonas putida, modulating catabolite repression
-
Moreno R, Fonseca P, Rojo F, (2012) Two small RNAs, CrcY and CrcZ, act in concert to sequester the Crc global regulator in Pseudomonas putida, modulating catabolite repression. Mol Microbiol 83: 24-40.
-
(2012)
Mol Microbiol
, vol.83
, pp. 24-40
-
-
Moreno, R.1
Fonseca, P.2
Rojo, F.3
-
17
-
-
0029843951
-
Catabolite repression control in the Pseudomonads
-
Collier DN, Hager PW, Phibbs PV, (1996) Catabolite repression control in the Pseudomonads. Res Microbiol (147):: 551-561.
-
(1996)
Res Microbiol
, Issue.147
, pp. 551-561
-
-
Collier, D.N.1
Hager, P.W.2
Phibbs, P.V.3
-
18
-
-
0029796309
-
The nucleotide sequence of the Pseudomonas aeruginosa pyrE-crc-rph region and the purification of the crc gene product
-
MacGregor CH, Arora SK, Hager PW, Dail MB, Phibbs PV, (1996) The nucleotide sequence of the Pseudomonas aeruginosa pyrE-crc-rph region and the purification of the crc gene product. J Bacteriol 178: 5627-5635.
-
(1996)
J Bacteriol
, vol.178
, pp. 5627-5635
-
-
MacGregor, C.H.1
Arora, S.K.2
Hager, P.W.3
Dail, M.B.4
Phibbs, P.V.5
-
19
-
-
84871656731
-
Structure analysis of the global metabolic regulator Crc from Pseudomonas aeruginosa
-
Wei Y, Zhang H, Gao ZQ, Xu JH, Liu QS, et al. (2013) Structure analysis of the global metabolic regulator Crc from Pseudomonas aeruginosa. IUBMB Life 65: 50-57.
-
(2013)
IUBMB Life
, vol.65
, pp. 50-57
-
-
Wei, Y.1
Zhang, H.2
Gao, Z.Q.3
Xu, J.H.4
Liu, Q.S.5
-
20
-
-
33947181044
-
AP endonuclease paralogues with distinct activities in DNA repair and bacterial pathogenesis
-
Carpenter EP, Corbett A, Thomson H, Adacha J, Jensen K, et al. (2007) AP endonuclease paralogues with distinct activities in DNA repair and bacterial pathogenesis. EMBO J 26: 1363-1372.
-
(2007)
EMBO J
, vol.26
, pp. 1363-1372
-
-
Carpenter, E.P.1
Corbett, A.2
Thomson, H.3
Adacha, J.4
Jensen, K.5
-
21
-
-
0034719372
-
DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination
-
Mol CD, Izumi T, Mitra S, Tainer JA, (2000) DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination. Nature 403: 451-456.
-
(2000)
Nature
, vol.403
, pp. 451-456
-
-
Mol, C.D.1
Izumi, T.2
Mitra, S.3
Tainer, J.A.4
-
22
-
-
79960433506
-
Hfq and its constellation of RNA
-
Vogel J, Luisi BF, (2011) Hfq and its constellation of RNA. Nat Rev Microbiol 15: 578-589.
-
(2011)
Nat Rev Microbiol
, vol.15
, pp. 578-589
-
-
Vogel, J.1
Luisi, B.F.2
-
23
-
-
79959469361
-
Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq
-
Beich-Frandsen M, Vecerek B, Konarev PV, Sjöblom B, Kloiber K, et al. (2011) Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq. Nucleic Acids Res 39: 4900-4915.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 4900-4915
-
-
Beich-Frandsen, M.1
Vecerek, B.2
Konarev, P.V.3
Sjöblom, B.4
Kloiber, K.5
-
25
-
-
0033814819
-
Purification of proteins using polyhistidine affinity tags
-
Bornhorst JA, Falke JJ, (2000) Purification of proteins using polyhistidine affinity tags. Methods Enzymol 326: 245-254.
-
(2000)
Methods Enzymol
, vol.326
, pp. 245-254
-
-
Bornhorst, J.A.1
Falke, J.J.2
-
26
-
-
0242380623
-
Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coli
-
Sauter C, Basquin J, Suck D, (2003) Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coli. Nucleic Acids Res 31: 4091-4098.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4091-4098
-
-
Sauter, C.1
Basquin, J.2
Suck, D.3
-
27
-
-
0016719843
-
Catabolite repression of Pseudomonas aeruginosa amidase: the effect of carbon source on amidase synthesis
-
Smyth PF, Clarke PH, (1975) Catabolite repression of Pseudomonas aeruginosa amidase: the effect of carbon source on amidase synthesis. J Gen Microbiol 90: 81-90.
-
(1975)
J Gen Microbiol
, vol.90
, pp. 81-90
-
-
Smyth, P.F.1
Clarke, P.H.2
-
28
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
-
Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2: 2006-2008.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 2006-2008
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
-
29
-
-
76449099287
-
Xds
-
Kabsch W, (2010) Xds. Acta Cryst D 66: 125-132.
-
(2010)
Acta Cryst D
, vol.66
, pp. 125-132
-
-
Kabsch, W.1
-
30
-
-
79953737180
-
Overview of the CCP4 suite and current developments
-
Winn MD, Ballard CC, Cowtan KD, Dodson EJ, Emsley P, et al. (2011) Overview of the CCP4 suite and current developments. Acta Cryst D 67: 235-242.
-
(2011)
Acta Cryst D
, vol.67
, pp. 235-242
-
-
Winn, M.D.1
Ballard, C.C.2
Cowtan, K.D.3
Dodson, E.J.4
Emsley, P.5
-
31
-
-
33846426122
-
Solving structures of protein complexes by molecular replacement with Phaser
-
McCoy AJ, (2007) Solving structures of protein complexes by molecular replacement with Phaser. Acta Cryst D 63: 32-41.
-
(2007)
Acta Cryst D
, vol.63
, pp. 32-41
-
-
McCoy, A.J.1
-
32
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov GN, Vagin AA, Dodson EJ, (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Cryst D 53: 240-255.
-
(1997)
Acta Cryst D
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
33
-
-
76449098262
-
PHENIX: a comprehensive Python-based system for macromolecular structure solution
-
Adams PD, Afonine PV, Bunkoczi G, Chen VB, Davis IW, et al. (2010) PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Cryst D 66: 213-221.
-
(2010)
Acta Cryst D
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkoczi, G.3
Chen, V.B.4
Davis, I.W.5
-
34
-
-
13244281317
-
Coot: model-building tools for molecular graphics
-
Emsley P, Cowtan K, (2004) Coot: model-building tools for molecular graphics. Acta Cryst D 60: 2126-2132.
-
(2004)
Acta Cryst D
, vol.60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
35
-
-
74549178560
-
MolProbity: all-atom structure validation for macromolecular crystallography
-
Chen VB, Arendall WB, Headd JJ, Keedy DA, Immormino RM, et al. (2010) MolProbity: all-atom structure validation for macromolecular crystallography. Acta Cryst D 66: 12-21.
-
(2010)
Acta Cryst D
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
Arendall, W.B.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
-
37
-
-
0035964342
-
Electrostatics of nanosystems: application to microtubules and the ribosome
-
Baker NA, Sept D, Joseph S, Holst MJ, McCammon JA, (2001) Electrostatics of nanosystems: application to microtubules and the ribosome. Proc Natl Acad Sci 98: 10037-10041.
-
(2001)
Proc Natl Acad Sci
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
38
-
-
33645065354
-
Hfq-dependent alterations of the transcriptome profile and effects on quorum sensing in Pseudomonas aeruginosa
-
Sonnleitner E, Schuster M, Sorger-Domenigg T, Greenberg EP, Bläsi U, (2006) Hfq-dependent alterations of the transcriptome profile and effects on quorum sensing in Pseudomonas aeruginosa. Mol Microbiol 59: 1542-1558.
-
(2006)
Mol Microbiol
, vol.59
, pp. 1542-1558
-
-
Sonnleitner, E.1
Schuster, M.2
Sorger-Domenigg, T.3
Greenberg, E.P.4
Bläsi, U.5
|