Analysis and design of RNA sequencing experiments for identifying RNA editing and other single-nucleotide variants

RNA

Volumn 19, Issue 6, 2013, Pages 725-732

  Lee, Jae Hyung ^a,b   Ang, Jason K ^a   Xiao, Xinshu ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Kyung Hee University   (South Korea)

Author keywords

Mapping error; Read mapping; RNA editing; RNA DNA difference; RNA Seq

Indexed keywords

DNA; NUCLEOTIDE; RNA;

ALLELE; DATA ANALYSIS; EXPERIMENTAL DESIGN; FALSE POSITIVE RESULT; GENE EXPRESSION; GENETIC VARIABILITY; HUMAN; LYMPHOBLASTOID CELL; MOLECULAR LIBRARY; PREDICTION; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; REVIEW; RNA EDITING; RNA SEQUENCE; SINGLE NUCLEOTIDE POLYMORPHISM;

MAPPING ERROR; READ MAPPING; RNA EDITING; RNA-DNA DIFFERENCE; RNA-SEQ;

ALLELES; BASE SEQUENCE; DATABASES, NUCLEIC ACID; GENE EXPRESSION PROFILING; HUMANS; MOLECULAR SEQUENCE ANNOTATION; POLYMORPHISM, SINGLE NUCLEOTIDE; REPRODUCIBILITY OF RESULTS; RESEARCH DESIGN; RNA EDITING; RNA SPLICE SITES; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, RNA;

EID: 84878087827     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.037903.112     Document Type: Review

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