메뉴 건너뛰기




Volumn 103, Issue 6, 2013, Pages 633-640

Development of a magnetic capture hybridization real-time PCR assay for detection of tumorigenic Agrobacterium vitis in grapevines

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; ISOLATION AND PURIFICATION; MAGNETISM; METHODOLOGY; MICROBIOLOGY; PLANT DISEASE; REAL TIME POLYMERASE CHAIN REACTION; RHIZOBIUM; SENSITIVITY AND SPECIFICITY; VITIS;

EID: 84877933596     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-10-12-0267-R     Document Type: Article
Times cited : (24)

References (36)
  • 1
    • 33645120632 scopus 로고    scopus 로고
    • Development of a magnetic capture hybridization-PCR assay for Listeria monocytogenes direct detection in milk samples
    • Amagliani, G., Omiccioli, E., Campo, A., Bruce, I. J., Brandi, G., and Magnani, M. 2006. Development of a magnetic capture hybridization-PCR assay for Listeria monocytogenes direct detection in milk samples. J. Appl. Microbiol. 100:375-383.
    • (2006) J. Appl. Microbiol. , vol.100 , pp. 375-383
    • Amagliani, G.1    Omiccioli, E.2    Campo, A.3    Bruce, I.J.4    Brandi, G.5    Magnani, M.6
  • 2
    • 79955468159 scopus 로고    scopus 로고
    • Development of a SYBR Green i based real-time RT-PCR assay for detection and quantification of bovine coronavirus
    • Amer, H. M., and Almajhdi, F. N. 2011. Development of a SYBR Green I based real-time RT-PCR assay for detection and quantification of bovine coronavirus. Mol. Cell Probes 25:101-107.
    • (2011) Mol. Cell Probes , vol.25 , pp. 101-107
    • Amer, H.M.1    Almajhdi, F.N.2
  • 3
    • 0141625782 scopus 로고    scopus 로고
    • Amplification efficiency of thermostable DNA polymerases
    • Arezi, B., Xing, W., Sorge, J. A., and Hogrefe, H. H. 2003. Amplification efficiency of thermostable DNA polymerases. Anal. Biochem. 321:226-235.
    • (2003) Anal. Biochem. , vol.321 , pp. 226-235
    • Arezi, B.1    Xing, W.2    Sorge, J.A.3    Hogrefe, H.H.4
  • 4
    • 84980204586 scopus 로고
    • Detection of Agrobacterium tumefaciens in grapevine cuttings
    • Bazzi, C., Piazza, C., and Burr, T. J. 1987. Detection of Agrobacterium tumefaciens in grapevine cuttings. Bull. OEPP 17:105-112.
    • (1987) Bull. OEPP , vol.17 , pp. 105-112
    • Bazzi, C.1    Piazza, C.2    Burr, T.J.3
  • 5
    • 33646888810 scopus 로고    scopus 로고
    • A multiplex real-time PCR assay for detection of Xanthomonas campestris from brassicas
    • Berg, T., Tesoriero, L., and Hailstones, D. L. 2006. A multiplex real-time PCR assay for detection of Xanthomonas campestris from brassicas. Lett. Appl. Microbiol. 42:624-630.
    • (2006) Lett. Appl. Microbiol. , vol.42 , pp. 624-630
    • Berg, T.1    Tesoriero, L.2    Hailstones, D.L.3
  • 6
    • 53249156458 scopus 로고    scopus 로고
    • Detection of Agrobacterium vitis by PCR using novel virD2 gene-specific primers that discriminate two subgroups
    • Bini, F., Geider, K., and Bazzi, C. 2008. Detection of Agrobacterium vitis by PCR using novel virD2 gene-specific primers that discriminate two subgroups. Eur. J. Plant Pathol. 122:403-411.
    • (2008) Eur. J. Plant Pathol. , vol.122 , pp. 403-411
    • Bini, F.1    Geider, K.2    Bazzi, C.3
  • 7
    • 48649085718 scopus 로고    scopus 로고
    • Novel pathogen-specific primers for the detection of Agrobacterium vitis and Agrobacterium tumefaciens
    • Bini, F., Kuczmog, A., Putnoky, P., Otten, L., Bazzi, C., Burr, T. J., and Szegedi, E 2008. Novel pathogen-specific primers for the detection of Agrobacterium vitis and Agrobacterium tumefaciens. Vitis 47:181-189.
    • (2008) Vitis , vol.47 , pp. 181-189
    • Bini, F.1    Kuczmog, A.2    Putnoky, P.3    Otten, L.4    Bazzi, C.5    Burr, T.J.6    Szegedi, E.7
  • 8
    • 0000662891 scopus 로고
    • A monoclonal antibody specific to Agrobacterium tumefaciens biovar 3 and its utilization for indexing grapevine propagation material
    • Bishop, A. L., Burr, T. J., Mittak, V. L., and Katz, B. H. 1989. A monoclonal antibody specific to Agrobacterium tumefaciens biovar 3 and its utilization for indexing grapevine propagation material. Phytopathology 79:995-998.
    • (1989) Phytopathology , vol.79 , pp. 995-998
    • Bishop, A.L.1    Burr, T.J.2    Mittak, V.L.3    Katz, B.H.4
  • 9
    • 0031792275 scopus 로고    scopus 로고
    • Crown gall of grape: Biology of Agrobacterium vitis and the development of disease control strategies
    • Burr, T. J., Bazzi, C., Sule, S., and Otten, L. 1998. Crown gall of grape: biology of Agrobacterium vitis and the development of disease control strategies. Plant Dis. 82:1288-1297.
    • (1998) Plant Dis. , vol.82 , pp. 1288-1297
    • Burr, T.J.1    Bazzi, C.2    Sule, S.3    Otten, L.4
  • 10
    • 0001470656 scopus 로고
    • A root-specific decay of grapevine caused by Agrobacterium tumefaciens and A. radiobacter Biovar 3
    • Burr, T. J., Bishop, A. L., Katz, B. H., Blanchard, L. M., and Bazzi, C. 1987. A root-specific decay of grapevine caused by Agrobacterium tumefaciens and A. radiobacter Biovar 3. Phytopathology 77:1424-1427.
    • (1987) Phytopathology , vol.77 , pp. 1424-1427
    • Burr, T.J.1    Bishop, A.L.2    Katz, B.H.3    Blanchard, L.M.4    Bazzi, C.5
  • 11
    • 0001128036 scopus 로고
    • Grapevine cuttings as potential sites of surviving and means of dissemination of Agrobacterium tumefaciens
    • Burr, T. J., and Katz, B. 1984. Grapevine cuttings as potential sites of surviving and means of dissemination of Agrobacterium tumefaciens. Plant Dis. 68:976-978.
    • (1984) Plant Dis. , vol.68 , pp. 976-978
    • Burr, T.J.1    Katz, B.2
  • 12
    • 0028842986 scopus 로고
    • Survival and tumorigenicity of Agrobacterium vitis in living and decaying grape roots and canes in soil
    • Burr, T. J., Reid, C. L., Yoshimura, M., Momol, E. A., and Bazzi, C. 1995. Survival and tumorigenicity of Agrobacterium vitis in living and decaying grape roots and canes in soil. Plant Dis. 79:677-682.
    • (1995) Plant Dis. , vol.79 , pp. 677-682
    • Burr, T.J.1    Reid, C.L.2    Yoshimura, M.3    Momol, E.A.4    Bazzi, C.5
  • 13
    • 78249290521 scopus 로고    scopus 로고
    • A one-step reverse transcription real-time PCR assay for the detection and quantitation of Grapevine fanleaf virus
    • Cepin, U., Gutiérrez-Aguirre, I., Balažic, L., Pompe-Novak, M., Gruden, K., and Ravnikar, M. 2010. A one-step reverse transcription real-time PCR assay for the detection and quantitation of Grapevine fanleaf virus. J. Virol. Methods 170:47-56.
    • (2010) J. Virol. Methods , vol.170 , pp. 47-56
    • Cepin, U.1    Gutiérrez-Aguirre, I.2    Balažic, L.3    Pompe-Novak, M.4    Gruden, K.5    Ravnikar, M.6
  • 14
    • 0028868230 scopus 로고
    • A rapid and sensitive method to detect Agrobacterium vitis in grapevine cuttings using the Polymerase Chain Reaction
    • Eastwell, K. C., Willis, L. G., and Cavileer, T. D. 1995. A rapid and sensitive method to detect Agrobacterium vitis in grapevine cuttings using the Polymerase Chain Reaction. Plant Dis. 79:822-827.
    • (1995) Plant Dis. , vol.79 , pp. 822-827
    • Eastwell, K.C.1    Willis, L.G.2    Cavileer, T.D.3
  • 15
    • 0034573365 scopus 로고    scopus 로고
    • Development of immunomagnetic separation technique for isolation of Pseudomonas syringae pv. phaseolicola
    • Güven, K., and Mutlu, M. B. 2000. Development of immunomagnetic separation technique for isolation of Pseudomonas syringae pv. phaseolicola. Folia Microbiol. (Praha) 45:321-324.
    • (2000) Folia Microbiol. (Praha) , vol.45 , pp. 321-324
    • Güven, K.1    Mutlu, M.B.2
  • 16
    • 67650074531 scopus 로고    scopus 로고
    • Simultaneous detection of Acidovorax avenae subsp. citrulli and Didymella bryoniae in cucurbit seedlots using magnetic capture hybridization and real-time polymerase chain reaction
    • Ha, Y., Fessehaie, A., Ling, K. S., Wechter, W. P., Keinath, A. P., and Walcott, R. R. 2009. Simultaneous detection of Acidovorax avenae subsp. citrulli and Didymella bryoniae in cucurbit seedlots using magnetic capture hybridization and real-time polymerase chain reaction. Phytopathology 99:666-678.
    • (2009) Phytopathology , vol.99 , pp. 666-678
    • Ha, Y.1    Fessehaie, A.2    Ling, K.S.3    Wechter, W.P.4    Keinath, A.P.5    Walcott, R.R.6
  • 17
    • 84863118854 scopus 로고    scopus 로고
    • A rapid, sensitive assay for Ralstonia solanacearum race 3 biovar 2 in plant and soil samples using magnetic beads and real-time PCR
    • Ha, Y., Kim, J., Denny, T. P., and Schell, M. A. 2012. A rapid, sensitive assay for Ralstonia solanacearum race 3 biovar 2 in plant and soil samples using magnetic beads and real-time PCR. Plant Dis. 96:258-264.
    • (2012) Plant Dis. , vol.96 , pp. 258-264
    • Ha, Y.1    Kim, J.2    Denny, T.P.3    Schell, M.A.4
  • 18
    • 0036883629 scopus 로고    scopus 로고
    • Melting curve analysis of feline calicivirus isolates detected by real-time reverse transcription PCR
    • Helps, C., Lait, P., Tasker, S., and Harbour, D. 2002. Melting curve analysis of feline calicivirus isolates detected by real-time reverse transcription PCR. J. Virol. Methods 106:241-244.
    • (2002) J. Virol. Methods , vol.106 , pp. 241-244
    • Helps, C.1    Lait, P.2    Tasker, S.3    Harbour, D.4
  • 19
    • 0029149385 scopus 로고
    • Microscale detection of specific bacterial DNA in soil with a magnetic capture-hybridization and PCR amplification assay
    • Jacobsen, C. S. 1995. Microscale detection of specific bacterial DNA in soil with a magnetic capture-hybridization and PCR amplification assay. Appl. Environ. Microbiol. 61:3347-3352.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 3347-3352
    • Jacobsen, C.S.1
  • 20
    • 6544225509 scopus 로고
    • Latent occurrence of Agrobacterium tumefaciens biovar 3 in grapevine (Vitis vinifera L.)
    • Jager, J., Lorenz, D., Plapp, R., and Eichhorn, K. W. 1989. Latent occurrence of Agrobacterium tumefaciens biovar 3 in grapevine (Vitis vinifera L.). Vitic. Enol. Sci. 44:14-20.
    • (1989) Vitic. Enol. Sci. , vol.44 , pp. 14-20
    • Jager, J.1    Lorenz, D.2    Plapp, R.3    Eichhorn, K.W.4
  • 21
    • 84863523178 scopus 로고    scopus 로고
    • Progress towards a real-time PCR assay for the simultaneous detection of Clavibacter michiganensis subsp. michiganensis and Pepino mosaic virus in tomato seed
    • Johnson, K. L., and Walcott, R. R. 2012. Progress towards a real-time PCR assay for the simultaneous detection of Clavibacter michiganensis subsp. michiganensis and Pepino mosaic virus in tomato seed. J. Phytopathol. 160:353-363.
    • (2012) J. Phytopathol. , vol.160 , pp. 353-363
    • Johnson, K.L.1    Walcott, R.R.2
  • 22
    • 0000401101 scopus 로고
    • Biotypes of Agrobacterium radiobacter var. tumefaciens and their biological control
    • Kerr, A., and Panagopoulos, C. G. 1977. Biotypes of Agrobacterium radiobacter var. tumefaciens and their biological control. Phytopathology 90:172-179.
    • (1977) Phytopathology , vol.90 , pp. 172-179
    • Kerr, A.1    Panagopoulos, C.G.2
  • 23
    • 0040674694 scopus 로고
    • Further evidences concerning the systemic spreading of Agrobacterium tumefaciens in the vascular system of grapevines
    • Lehoczky, J. 1971. Further evidences concerning the systemic spreading of Agrobacterium tumefaciens in the vascular system of grapevines. Vitis 10:215-221.
    • (1971) Vitis , vol.10 , pp. 215-221
    • Lehoczky, J.1
  • 24
    • 35648945745 scopus 로고    scopus 로고
    • A semi-automated and highly sensitive streptavidin magnetic capture-hybridization RT-PCR assay: Application to genus-wide or species-specific detection of several viruses of ornamental bulb crops
    • Miglino, R., Jodlowska, A., Pappu, H. R., and van Schadewijk, T. R. 2007. A semi-automated and highly sensitive streptavidin magnetic capture-hybridization RT-PCR assay: application to genus-wide or species-specific detection of several viruses of ornamental bulb crops. J. Virol. Methods 146:155-164.
    • (2007) J. Virol. Methods , vol.146 , pp. 155-164
    • Miglino, R.1    Jodlowska, A.2    Pappu, H.R.3    Van Schadewijk, T.R.4
  • 26
    • 0025369844 scopus 로고
    • Agrobacterium vitis sp. nov. for strains of Agrobacterium biovar 3 from grapevines
    • Ophel, K., and Kerr, A. 1990. Agrobacterium vitis sp. nov. for strains of Agrobacterium biovar 3 from grapevines. S. Int. J. Syst. Bacteriol. 40:236-241.
    • (1990) S. Int. J. Syst. Bacteriol. , vol.40 , pp. 236-241
    • Ophel, K.1    Kerr, A.2
  • 27
    • 0030476034 scopus 로고    scopus 로고
    • Phylogenetic relationships between Agrobacterium vitis isolates and their Ti plasmids
    • Otten, L., de Ruffray, P., Momol, E. A., Momol, M. T., and Burr, T. J. 1996. Phylogenetic relationships between Agrobacterium vitis isolates and their Ti plasmids. Mol. Plant Microbe Biol. 9:782-786.
    • (1996) Mol. Plant Microbe Biol. , vol.9 , pp. 782-786
    • Otten, L.1    De Ruffray, P.2    Momol, E.A.3    Momol, M.T.4    Burr, T.J.5
  • 28
    • 77949305463 scopus 로고    scopus 로고
    • Indexing Agrobacterium vitis in asymptomatic grapevine propagation material by two nested PCR assays
    • Peduto, F., Marchi, G., and Surico, G. 1998. Indexing Agrobacterium vitis in asymptomatic grapevine propagation material by two nested PCR assays Am. J. Enol. Vitic. 61:102-112.
    • (1998) Am. J. Enol. Vitic. , vol.61 , pp. 102-112
    • Peduto, F.1    Marchi, G.2    Surico, G.3
  • 29
    • 14844290303 scopus 로고    scopus 로고
    • Development of a semi-nested PCR based method for sensitive detection of tumorigenic Agrobacterium in soil
    • Pulawska, J., and Sobiczewski, P. 2005. Development of a semi-nested PCR based method for sensitive detection of tumorigenic Agrobacterium in soil. J. Appl. Microbiol. 98:710-721.
    • (2005) J. Appl. Microbiol. , vol.98 , pp. 710-721
    • Pulawska, J.1    Sobiczewski, P.2
  • 30
    • 0028872153 scopus 로고
    • PCR detection of Ti and Ri plasmids from phytopathogenic Agrobacterium strains
    • Sawada, H., Leki, H., and Matsuda, I. 1995. PCR detection of Ti and Ri plasmids from phytopathogenic Agrobacterium strains. Appl. Environ. Microbiol. 61:828-831.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 828-831
    • Sawada, H.1    Leki, H.2    Matsuda, I.3
  • 31
    • 0036084834 scopus 로고    scopus 로고
    • Real-time polymerase chain reaction for one-hour on-site diagnosis of Pierce's disease of grape in early season asymptomatic vines
    • Schaad, N. W., Opgenorth, D., and Gaush, P. 2002. Real-time polymerase chain reaction for one-hour on-site diagnosis of Pierce's disease of grape in early season asymptomatic vines. Phytopathology 92:721-728.
    • (2002) Phytopathology , vol.92 , pp. 721-728
    • Schaad, N.W.1    Opgenorth, D.2    Gaush, P.3
  • 32
    • 0025602888 scopus 로고
    • VirD2 gene product from the nopaline plasmid pTiC58 has at least two activities required for virulence
    • Steck, T. R., Lin, T. S., and Kado, C. I. 1990. VirD2 gene product from the nopaline plasmid pTiC58 has at least two activities required for virulence. Nucleic Acids Res. 18:953-958.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 953-958
    • Steck, T.R.1    Lin, T.S.2    Kado, C.I.3
  • 33
    • 1842270008 scopus 로고
    • Rapid detection of Agrobacterium tumefaciens in grapevine propagating material and the basis for an efficient indexing system
    • Tarbah, F. A., and Goodman, R. N. 1986. Rapid detection of Agrobacterium tumefaciens in grapevine propagating material and the basis for an efficient indexing system. Plant Dis. 70:566-568.
    • (1986) Plant Dis. , vol.70 , pp. 566-568
    • Tarbah, F.A.1    Goodman, R.N.2
  • 34
    • 0034802531 scopus 로고    scopus 로고
    • Detection of immunomagnetically captured Escherichia coli O157:H7 by antibodyconjugated alkaline phosphatase
    • Tu, S. I., Patterson, D., Briggs, C., Irwin, P., and Yu, L. 2001. Detection of immunomagnetically captured Escherichia coli O157:H7 by antibodyconjugated alkaline phosphatase. J. Ind. Microbiol. Biotechnol. 26:345-349.
    • (2001) J. Ind. Microbiol. Biotechnol. , vol.26 , pp. 345-349
    • Tu, S.I.1    Patterson, D.2    Briggs, C.3    Irwin, P.4    Yu, L.5
  • 35
    • 0034106579 scopus 로고    scopus 로고
    • Detection of Acidovorax avenae subsp. citrulli in watermelon seed using immunomagnetic separation and the polymerase chain reaction
    • Walcott, R. R., and Gitaitis, R. D. 2000. Detection of Acidovorax avenae subsp. citrulli in watermelon seed using immunomagnetic separation and the polymerase chain reaction. Plant Dis. 84:470-474.
    • (2000) Plant Dis. , vol.84 , pp. 470-474
    • Walcott, R.R.1    Gitaitis, R.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.