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Volumn 140, Issue , 2013, Pages 73-79

Metabolomics-based component profiling of Halomonas sp. KM-1 during different growth phases in poly(3-hydroxybutyrate) production

Author keywords

GC MS; Halomonas sp. KM 1; Metabolomics; Poly(3 hydroxybutyrate)

Indexed keywords

AMINO ACIDS; FERMENTATION; GAS CHROMATOGRAPHY; GLUCOSE; METABOLITES;

EID: 84877891679     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2013.04.059     Document Type: Article
Times cited : (25)

References (35)
  • 1
    • 0142027019 scopus 로고    scopus 로고
    • Process design for microbial plastic factories: metabolic engineering of polyhydroxyalkanoates
    • Aldor I.S., Keasling J.D. Process design for microbial plastic factories: metabolic engineering of polyhydroxyalkanoates. Curr. Opin. Biotechnol. 2003, 14:475-483.
    • (2003) Curr. Opin. Biotechnol. , vol.14 , pp. 475-483
    • Aldor, I.S.1    Keasling, J.D.2
  • 2
    • 64649089947 scopus 로고    scopus 로고
    • Cross-platform comparison of methods for quantitative metabolomics of primary metabolism
    • Buscher J.M., Czernik D., Ewald J.C., Sauer U., Zamboni N. Cross-platform comparison of methods for quantitative metabolomics of primary metabolism. Anal. Chem. 2009, 81:2135-2143.
    • (2009) Anal. Chem. , vol.81 , pp. 2135-2143
    • Buscher, J.M.1    Czernik, D.2    Ewald, J.C.3    Sauer, U.4    Zamboni, N.5
  • 3
    • 0032900321 scopus 로고    scopus 로고
    • Factors affecting economics of polyhydroxyalkanoate production by bacterial fermentation
    • Choi J., Lee S.Y. Factors affecting economics of polyhydroxyalkanoate production by bacterial fermentation. Appl. Microbiol. Biotechnol. 1999, 51:13-21.
    • (1999) Appl. Microbiol. Biotechnol. , vol.51 , pp. 13-21
    • Choi, J.1    Lee, S.Y.2
  • 4
    • 0037118623 scopus 로고    scopus 로고
    • Enhanced production of d-(-)-3-hydroxybutyric acid by recombinant Escherichia coli
    • Gao H.J., Wu Q., Chen G.Q. Enhanced production of d-(-)-3-hydroxybutyric acid by recombinant Escherichia coli. FEMS Microbiol. Lett. 2002, 213:59-65.
    • (2002) FEMS Microbiol. Lett. , vol.213 , pp. 59-65
    • Gao, H.J.1    Wu, Q.2    Chen, G.Q.3
  • 5
    • 0002132063 scopus 로고
    • Pilot scale production of PHB with Alcaligenes latus
    • Kluwer, Dordrecht, E.A. Dawes (Ed.)
    • Hängii U.J. Pilot scale production of PHB with Alcaligenes latus. Novel Biodegradable Microbial Polymers 1990, 65-70. Kluwer, Dordrecht. E.A. Dawes (Ed.).
    • (1990) Novel Biodegradable Microbial Polymers , pp. 65-70
    • Hängii, U.J.1
  • 6
    • 33846684899 scopus 로고    scopus 로고
    • Increased diversification of polyhydroxyalkanoates by modification reactions for industrial and medical applications
    • Hazer B., Steinbuchel A. Increased diversification of polyhydroxyalkanoates by modification reactions for industrial and medical applications. Appl. Microbiol. Biotechnol. 2007, 74:1-12.
    • (2007) Appl. Microbiol. Biotechnol. , vol.74 , pp. 1-12
    • Hazer, B.1    Steinbuchel, A.2
  • 7
    • 0004027859 scopus 로고
    • Influence of photosynthetic activity on fatty acid production by Spirulina platensis
    • Hirano M., Imai M., Abe K., Manabe E. Influence of photosynthetic activity on fatty acid production by Spirulina platensis. J. Mar. Biotechnol. 1995, 3:86-88.
    • (1995) J. Mar. Biotechnol. , vol.3 , pp. 86-88
    • Hirano, M.1    Imai, M.2    Abe, K.3    Manabe, E.4
  • 8
    • 0025817460 scopus 로고
    • Production of poly-β-hydroxybutyric acid from carbon dioxide by Alcaligenes eutrophus ATCC 17697
    • Ishizaki A., Tanaka K. Production of poly-β-hydroxybutyric acid from carbon dioxide by Alcaligenes eutrophus ATCC 17697. J. Ferment. Bioeng. 1991, 71:254-257.
    • (1991) J. Ferment. Bioeng. , vol.71 , pp. 254-257
    • Ishizaki, A.1    Tanaka, K.2
  • 9
    • 75649109704 scopus 로고    scopus 로고
    • Poly(3-hydroxybutyrate) production by isolated Halomonas sp. KM-1 using waste glycerol
    • Kawata Y., Aiba S. Poly(3-hydroxybutyrate) production by isolated Halomonas sp. KM-1 using waste glycerol. Biosci. Biotechnol., Biochem. 2010, 74:175-177.
    • (2010) Biosci. Biotechnol., Biochem. , vol.74 , pp. 175-177
    • Kawata, Y.1    Aiba, S.2
  • 10
    • 84871005527 scopus 로고    scopus 로고
    • Efficient secreted production of (R)-3-hydroxybutyric acid from living Halomonas sp. KM-1 under successive aerobic and microaerobic conditions
    • Kawata Y., Kawasaki K., Shigeri Y. Efficient secreted production of (R)-3-hydroxybutyric acid from living Halomonas sp. KM-1 under successive aerobic and microaerobic conditions. Appl. Microbiol. Biotechnol. 2012, 96:913-920.
    • (2012) Appl. Microbiol. Biotechnol. , vol.96 , pp. 913-920
    • Kawata, Y.1    Kawasaki, K.2    Shigeri, Y.3
  • 11
    • 72449163039 scopus 로고    scopus 로고
    • Metabolomics reveals alterations in both primary and secondary metabolites by wine bacteria
    • Lee J.E., Hwang G.S., Lee C.H., Hong Y.S. Metabolomics reveals alterations in both primary and secondary metabolites by wine bacteria. J. Agric. Food Chem. 2009, 57:10772-10783.
    • (2009) J. Agric. Food Chem. , vol.57 , pp. 10772-10783
    • Lee, J.E.1    Hwang, G.S.2    Lee, C.H.3    Hong, Y.S.4
  • 12
    • 0000862288 scopus 로고
    • Produits de deshydratation et de polymerization de l'acide β-oxybutyrique
    • Lemoigne M. Produits de deshydratation et de polymerization de l'acide β-oxybutyrique. Bull. Soc. Chim. Biol. 1926, 8:770-782.
    • (1926) Bull. Soc. Chim. Biol. , vol.8 , pp. 770-782
    • Lemoigne, M.1
  • 13
    • 33947141120 scopus 로고    scopus 로고
    • The production of polyhydroxyalkanoates in recombinant Escherichia coli
    • Li R., Zhang H., Qi Q. The production of polyhydroxyalkanoates in recombinant Escherichia coli. Bioresour. Technol. 2007, 98:2313-2320.
    • (2007) Bioresour. Technol. , vol.98 , pp. 2313-2320
    • Li, R.1    Zhang, H.2    Qi, Q.3
  • 14
    • 84872287940 scopus 로고    scopus 로고
    • Efficient (R)-3-hydroxybutyrate production using acetyl CoA-regenerating pathway catalyzed by coenzyme A transferase
    • Matsumoto K., Okei T., Honma I., Ooi T., Aoki H., Taguchi S. Efficient (R)-3-hydroxybutyrate production using acetyl CoA-regenerating pathway catalyzed by coenzyme A transferase. Appl. Microbiol. Biotechnol. 2013, 97:205-210.
    • (2013) Appl. Microbiol. Biotechnol. , vol.97 , pp. 205-210
    • Matsumoto, K.1    Okei, T.2    Honma, I.3    Ooi, T.4    Aoki, H.5    Taguchi, S.6
  • 15
    • 84857455189 scopus 로고    scopus 로고
    • Biopolymers production from mixed cultures and pyrolysis by-products
    • Moita R., Lemos P.C. Biopolymers production from mixed cultures and pyrolysis by-products. J. Biotechnol. 2012, 157:578-583.
    • (2012) J. Biotechnol. , vol.157 , pp. 578-583
    • Moita, R.1    Lemos, P.C.2
  • 16
    • 34249843968 scopus 로고    scopus 로고
    • Use of headspace solid-phase microextraction for the quantification of poly(3-hydroxybutyrate) in microbial cells
    • Monteil-Rivera F., Betancourt A., Van Tra H., Yezza A., Hawari J. Use of headspace solid-phase microextraction for the quantification of poly(3-hydroxybutyrate) in microbial cells. J. Chromatogr. A 2007, 1154:34-41.
    • (2007) J. Chromatogr. A , vol.1154 , pp. 34-41
    • Monteil-Rivera, F.1    Betancourt, A.2    Van Tra, H.3    Yezza, A.4    Hawari, J.5
  • 17
    • 34548623183 scopus 로고    scopus 로고
    • Response of the central metabolism of Escherichia coli to modified expression of the gene encoding the glucose-6-phosphate dehydrogenase
    • Nicolas C., Kiefer P., Letisse F., Kromer J., Massou S., Soucaille P., Wittmann C., Lindley N.D., Portais J.C. Response of the central metabolism of Escherichia coli to modified expression of the gene encoding the glucose-6-phosphate dehydrogenase. FEBS Lett. 2007, 581:3771-3776.
    • (2007) FEBS Lett. , vol.581 , pp. 3771-3776
    • Nicolas, C.1    Kiefer, P.2    Letisse, F.3    Kromer, J.4    Massou, S.5    Soucaille, P.6    Wittmann, C.7    Lindley, N.D.8    Portais, J.C.9
  • 19
    • 69549111723 scopus 로고    scopus 로고
    • Optimization of process parameters for maximum poly(-β-)hydroxybutyrate (PHB) production by Bacillus thuringiensis IAM 12077
    • Pal A., Prabhu A., Kumar A.A., Rajagopal B., Dadhe K., Ponnamma V., Shivakumar S. Optimization of process parameters for maximum poly(-β-)hydroxybutyrate (PHB) production by Bacillus thuringiensis IAM 12077. Pol. J. Microbiol. 2009, 58:149-154.
    • (2009) Pol. J. Microbiol. , vol.58 , pp. 149-154
    • Pal, A.1    Prabhu, A.2    Kumar, A.A.3    Rajagopal, B.4    Dadhe, K.5    Ponnamma, V.6    Shivakumar, S.7
  • 20
    • 33745424182 scopus 로고    scopus 로고
    • Dispersion optimization to enhance PHB production in fed-batch cultures of Ralstonia eutropha
    • Patnaik Pratap.R. Dispersion optimization to enhance PHB production in fed-batch cultures of Ralstonia eutropha. Bioresour. Technol. 2006, 97:1994-2001.
    • (2006) Bioresour. Technol. , vol.97 , pp. 1994-2001
    • Patnaik, P.1
  • 21
    • 30944465851 scopus 로고    scopus 로고
    • Quenching of microbial samples for increased reliability of microarray data
    • Pieterse B., Jellema R.H., van der Werf M.J. Quenching of microbial samples for increased reliability of microarray data. J. Microbiol. Methods 2006, 64:207-216.
    • (2006) J. Microbiol. Methods , vol.64 , pp. 207-216
    • Pieterse, B.1    Jellema, R.H.2    van der Werf, M.J.3
  • 22
    • 21244444248 scopus 로고    scopus 로고
    • Poly(β-hydroxybutyrate) production by a moderate halophile, Halomonas boliviensis LC1 using starch hydrolysate as substrate
    • Quillaguamán J., Hashim S., Bento F., Mattiasson B., Hatti-Kaul R. Poly(β-hydroxybutyrate) production by a moderate halophile, Halomonas boliviensis LC1 using starch hydrolysate as substrate. J. Appl. Microbiol. 2005, 99:151-157.
    • (2005) J. Appl. Microbiol. , vol.99 , pp. 151-157
    • Quillaguamán, J.1    Hashim, S.2    Bento, F.3    Mattiasson, B.4    Hatti-Kaul, R.5
  • 24
    • 76849099236 scopus 로고    scopus 로고
    • Synthesis and production of polyhydroxyalkanoates by halophiles: current potential and future prospects
    • Quillaguamán J., Guzmán H., Van-Thuoc D., Hatti-Kaul R. Synthesis and production of polyhydroxyalkanoates by halophiles: current potential and future prospects. Appl. Microbiol. Biotechnol. 2010, 85:1687-1696.
    • (2010) Appl. Microbiol. Biotechnol. , vol.85 , pp. 1687-1696
    • Quillaguamán, J.1    Guzmán, H.2    Van-Thuoc, D.3    Hatti-Kaul, R.4
  • 25
    • 33947259790 scopus 로고    scopus 로고
    • Optimizing conditions for poly(β-hydroxybutyrate) production by Halomonas boliviensis LC1 in batch culture with sucrose as carbon source
    • Quillaguamán J., Muñoz M., Mattiasson B., Hatti-Kaul R. Optimizing conditions for poly(β-hydroxybutyrate) production by Halomonas boliviensis LC1 in batch culture with sucrose as carbon source. Appl. Microbiol. Biotechnol. 2007, 74:981-986.
    • (2007) Appl. Microbiol. Biotechnol. , vol.74 , pp. 981-986
    • Quillaguamán, J.1    Muñoz, M.2    Mattiasson, B.3    Hatti-Kaul, R.4
  • 26
    • 49249111527 scopus 로고    scopus 로고
    • Poly-3-hydroxybutyrate (PHB) supports survival and reproduction in starving rhizobia
    • Ratcliff W.C., Kadam S.V., Denison R.F. Poly-3-hydroxybutyrate (PHB) supports survival and reproduction in starving rhizobia. FEMS Microbiol. Ecol. 2008, 65:391-399.
    • (2008) FEMS Microbiol. Ecol. , vol.65 , pp. 391-399
    • Ratcliff, W.C.1    Kadam, S.V.2    Denison, R.F.3
  • 27
    • 0030174587 scopus 로고    scopus 로고
    • Determination of intermediary metabolites in Aspergillus niger
    • Ruijter G.J.G., Visser J. Determination of intermediary metabolites in Aspergillus niger. J. Microbiol. Methods 1996, 25:295-302.
    • (1996) J. Microbiol. Methods , vol.25 , pp. 295-302
    • Ruijter, G.J.G.1    Visser, J.2
  • 28
    • 33750306743 scopus 로고    scopus 로고
    • Process optimization for poly-β-hydroxybutyrate production in a nitrogen fixing cyanobacterium, Nostoc muscorum using response surface methodology
    • Sharma L., Kumar Singh A., Panda B., Mallick N. Process optimization for poly-β-hydroxybutyrate production in a nitrogen fixing cyanobacterium, Nostoc muscorum using response surface methodology. Bioresour. Technol. 2007, 98:987-993.
    • (2007) Bioresour. Technol. , vol.98 , pp. 987-993
    • Sharma, L.1    Kumar Singh, A.2    Panda, B.3    Mallick, N.4
  • 29
    • 33846413623 scopus 로고    scopus 로고
    • Biotechnological approaches for the production of polyhydroxyalkanoates in microorganisms and plants - a review
    • Suriyamongkol P., Weselake R., Narine S., Moloney M., Shah S. Biotechnological approaches for the production of polyhydroxyalkanoates in microorganisms and plants - a review. Biotechnol. Adv. 2007, 25:148-175.
    • (2007) Biotechnol. Adv. , vol.25 , pp. 148-175
    • Suriyamongkol, P.1    Weselake, R.2    Narine, S.3    Moloney, M.4    Shah, S.5
  • 30
    • 84872957783 scopus 로고    scopus 로고
    • Metabolic rebalancing of CR6 interaction factor 1-deficient mouse embryonic fibroblasts: a mass spectrometry-based metabolic analysis
    • Tadi S., Kim S.J., Ryu M.J., Park T.S., Jeong J.S., Kim Y.H., Kweon G.R., Shong M.H., Yim Y.H. Metabolic rebalancing of CR6 interaction factor 1-deficient mouse embryonic fibroblasts: a mass spectrometry-based metabolic analysis. Bull. Korean Chem. Soc. 2013, 34:35-41.
    • (2013) Bull. Korean Chem. Soc. , vol.34 , pp. 35-41
    • Tadi, S.1    Kim, S.J.2    Ryu, M.J.3    Park, T.S.4    Jeong, J.S.5    Kim, Y.H.6    Kweon, G.R.7    Shong, M.H.8    Yim, Y.H.9
  • 31
    • 79960839264 scopus 로고    scopus 로고
    • Unsterile and continuous production of polyhydroxybutyrate by Halomonas TD01
    • Tan D., Xue Y.S., Aibaidula G., Chen G.Q. Unsterile and continuous production of polyhydroxybutyrate by Halomonas TD01. Bioresour. Technol. 2011, 102:8130-8136.
    • (2011) Bioresour. Technol. , vol.102 , pp. 8130-8136
    • Tan, D.1    Xue, Y.S.2    Aibaidula, G.3    Chen, G.Q.4
  • 32
    • 35448997761 scopus 로고    scopus 로고
    • Biotechnological production of (R)-3-hydroxybutyric acid monomer
    • Tokiwa Y., Ugwu C.U. Biotechnological production of (R)-3-hydroxybutyric acid monomer. J. Biotechnol. 2007, 132:264-272.
    • (2007) J. Biotechnol. , vol.132 , pp. 264-272
    • Tokiwa, Y.1    Ugwu, C.U.2
  • 33
    • 79955501451 scopus 로고    scopus 로고
    • GC/MS based metabolomics: development of a data mining system for metabolite identification by using soft independent modeling of class analogy (SIMCA)
    • Tsugawa H., Tsujimoto Y., Arita M., Bamba T., Fukusaki E. GC/MS based metabolomics: development of a data mining system for metabolite identification by using soft independent modeling of class analogy (SIMCA). BMC Bioinf. 2011, 12:131.
    • (2011) BMC Bioinf. , vol.12 , pp. 131
    • Tsugawa, H.1    Tsujimoto, Y.2    Arita, M.3    Bamba, T.4    Fukusaki, E.5
  • 34
    • 84860445255 scopus 로고    scopus 로고
    • Effect of substrate load and nutrients concentration on the polyhydroxyalkanoates (PHA) production using mixed consortia through wastewater treatment
    • Venkateswar Reddy M., Venkata Mohan S. Effect of substrate load and nutrients concentration on the polyhydroxyalkanoates (PHA) production using mixed consortia through wastewater treatment. Bioresour. Technol. 2012, 114:573-582.
    • (2012) Bioresour. Technol. , vol.114 , pp. 573-582
    • Venkateswar Reddy, M.1    Venkata Mohan, S.2
  • 35
    • 0038445716 scopus 로고    scopus 로고
    • Determination of 1-phenyl-3-methyl-5-pyrazolone-labeled carbohydrates by liquid chromatography and micellar electrokinetic chromatography
    • Zhang L., Xu J., Zhang L., Zhang W., Zhang Y. Determination of 1-phenyl-3-methyl-5-pyrazolone-labeled carbohydrates by liquid chromatography and micellar electrokinetic chromatography. J. Chromatogr. B 2003, 793:159-165.
    • (2003) J. Chromatogr. B , vol.793 , pp. 159-165
    • Zhang, L.1    Xu, J.2    Zhang, L.3    Zhang, W.4    Zhang, Y.5


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