메뉴 건너뛰기




Volumn 11, Issue 1, 2013, Pages

In-depth mass spectrometric mapping of the human vitreous proteome

Author keywords

Eye disease; Human eye; Prefractionation strategy; Vitreous proteome

Indexed keywords

BINDING PROTEIN; PROTEINASE; PROTEINASE INHIBITOR; PROTEOME; TRYPSIN;

EID: 84877843690     PISSN: None     EISSN: 14775956     Source Type: Journal    
DOI: 10.1186/1477-5956-11-22     Document Type: Article
Times cited : (60)

References (33)
  • 1
    • 54249107960 scopus 로고    scopus 로고
    • Adult vitreous structure and postnatal changes
    • Le Goff MM, Bishop PN. Adult vitreous structure and postnatal changes. Eye (Lond) 2008, 22:1214-1222.
    • (2008) Eye (Lond) , vol.22 , pp. 1214-1222
    • Le Goff, M.M.1    Bishop, P.N.2
  • 2
    • 12244259717 scopus 로고    scopus 로고
    • Occurrence and structural characterization of versican-like proteoglycan in human vitreous
    • Theocharis AD, Papageorgakopoulou N, Feretis E, Theocharis DA. Occurrence and structural characterization of versican-like proteoglycan in human vitreous. Biochimie 2002, 84:1237-1243.
    • (2002) Biochimie , vol.84 , pp. 1237-1243
    • Theocharis, A.D.1    Papageorgakopoulou, N.2    Feretis, E.3    Theocharis, D.A.4
  • 6
    • 72049123996 scopus 로고    scopus 로고
    • The vitreous gel: more than meets the eye
    • 10.1016/j.ajo.2009.07.036, 19875090
    • Holekamp NM. The vitreous gel: more than meets the eye. Am J Ophthalmol 2010, 149:32-36. 10.1016/j.ajo.2009.07.036, 19875090.
    • (2010) Am J Ophthalmol , vol.149 , pp. 32-36
    • Holekamp, N.M.1
  • 8
    • 0038798778 scopus 로고    scopus 로고
    • Catalogue of soluble proteins in human vitreous humor by one-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electrospray ionization mass spectrometry including seven angiogenesis-regulating factors
    • 10.1016/S1570-0232(03)00133-8, 12828993
    • Koyama R, Nakanishi T, Ikeda T, Shimizu A. Catalogue of soluble proteins in human vitreous humor by one-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electrospray ionization mass spectrometry including seven angiogenesis-regulating factors. J Chromatogr B Analyt Technol Biomed Life Sci 2003, 792:5-21. 10.1016/S1570-0232(03)00133-8, 12828993.
    • (2003) J Chromatogr B Analyt Technol Biomed Life Sci , vol.792 , pp. 5-21
    • Koyama, R.1    Nakanishi, T.2    Ikeda, T.3    Shimizu, A.4
  • 9
    • 36549073658 scopus 로고    scopus 로고
    • Profiling of vitreous proteomes from proliferative diabetic retinopathy and nondiabetic patients
    • 10.1002/pmic.200700745, 17955474
    • Kim T, Kim SJ, Kim K, Kang UB, Lee C, Park KS, Yu HG, Kim Y. Profiling of vitreous proteomes from proliferative diabetic retinopathy and nondiabetic patients. Proteomics 2007, 7:4203-4215. 10.1002/pmic.200700745, 17955474.
    • (2007) Proteomics , vol.7 , pp. 4203-4215
    • Kim, T.1    Kim, S.J.2    Kim, K.3    Kang, U.B.4    Lee, C.5    Park, K.S.6    Yu, H.G.7    Kim, Y.8
  • 13
    • 0037146488 scopus 로고    scopus 로고
    • Highly sensitive and fast protein detection with Coomassie Brilliant Blue in sodium dodecyl sulfate-polyacrylamide gel electrophoresis
    • Kang D, Gho M, Suh M, Kang C. Highly sensitive and fast protein detection with Coomassie Brilliant Blue in sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Bull Korean Chem Soc 2002, 11:1511-1512.
    • (2002) Bull Korean Chem Soc , vol.11 , pp. 1511-1512
    • Kang, D.1    Gho, M.2    Suh, M.3    Kang, C.4
  • 14
    • 79960741645 scopus 로고    scopus 로고
    • Quantitative proteomics identify novel miR-155 target proteins
    • 10.1371/journal.pone.0022146, 3143118, 21799781
    • Lossner C, Meier J, Warnken U, Rogers MA, Lichter P, Pscherer A, Schnolzer M. Quantitative proteomics identify novel miR-155 target proteins. PLoS One 2011, 6:e22146. 10.1371/journal.pone.0022146, 3143118, 21799781.
    • (2011) PLoS One , vol.6
    • Lossner, C.1    Meier, J.2    Warnken, U.3    Rogers, M.A.4    Lichter, P.5    Pscherer, A.6    Schnolzer, M.7
  • 15
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources
    • Huang DW, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources. Nature Protoc 2009, 4:44-57.
    • (2009) Nature Protoc , vol.4 , pp. 44-57
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 16
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
    • 10.1093/nar/gkn923, 2615629, 19033363
    • Huang DW, Sherman BT, Lempicki RA. Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res 2009, 37:1-13. 10.1093/nar/gkn923, 2615629, 19033363.
    • (2009) Nucleic Acids Res , vol.37 , pp. 1-13
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 18
    • 75549084894 scopus 로고    scopus 로고
    • PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium
    • 10.1093/nar/gkp1019, 2808919, 20015972
    • Mi H, Dong Q, Muruganujan A, Gaudet P, Lewis S, Thomas PD. PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium. Nucleic Acids Res 2010, 38:D204-D210. 10.1093/nar/gkp1019, 2808919, 20015972.
    • (2010) Nucleic Acids Res , vol.38
    • Mi, H.1    Dong, Q.2    Muruganujan, A.3    Gaudet, P.4    Lewis, S.5    Thomas, P.D.6
  • 21
    • 49849090387 scopus 로고    scopus 로고
    • Characterization of the vitreous proteome in diabetes without diabetic retinopathy and diabetes with proliferative diabetic retinopathy
    • 10.1021/pr800112g, 18433156
    • Gao BB, Chen X, Timothy N, Aiello LP, Feener EP. Characterization of the vitreous proteome in diabetes without diabetic retinopathy and diabetes with proliferative diabetic retinopathy. J Proteome Res 2008, 7:2516-2525. 10.1021/pr800112g, 18433156.
    • (2008) J Proteome Res , vol.7 , pp. 2516-2525
    • Gao, B.B.1    Chen, X.2    Timothy, N.3    Aiello, L.P.4    Feener, E.P.5
  • 22
    • 0025671801 scopus 로고
    • Morphology, pathology, and surgery of idiopathic vitreoretinal macular disorders
    • Smiddy WE, Michels RG, Green WR. Morphology, pathology, and surgery of idiopathic vitreoretinal macular disorders. A review. Retina 1990, 10:288-296.
    • (1990) A review. Retina , vol.10 , pp. 288-296
    • Smiddy, W.E.1    Michels, R.G.2    Green, W.R.3
  • 24
    • 79251582844 scopus 로고    scopus 로고
    • Attempting to distiguish between endogenous and contaminating cytokeratins in a corneal proteomic study
    • 10.1186/1471-2415-11-3, 3038150, 21272323
    • Lyngholm M, Vorum H, Nielsen K, Ehlers N, Honoré B. Attempting to distiguish between endogenous and contaminating cytokeratins in a corneal proteomic study. BMC Ophthalmol 2011, 11:3. 10.1186/1471-2415-11-3, 3038150, 21272323.
    • (2011) BMC Ophthalmol , vol.11 , pp. 3
    • Lyngholm, M.1    Vorum, H.2    Nielsen, K.3    Ehlers, N.4    Honoré, B.5
  • 25
    • 79451469767 scopus 로고    scopus 로고
    • New focus on alpha-crystallins in retinal neurodegenerative diseases
    • 10.1016/j.exer.2010.11.008, 21115004
    • Fort PE, Lampi KJ. New focus on alpha-crystallins in retinal neurodegenerative diseases. Exp Eye Res 2011, 92:98-103. 10.1016/j.exer.2010.11.008, 21115004.
    • (2011) Exp Eye Res , vol.92 , pp. 98-103
    • Fort, P.E.1    Lampi, K.J.2
  • 26
    • 78249233244 scopus 로고    scopus 로고
    • Antimicrobial peptides: the ancient arm of the human immune system
    • 10.4161/viru.1.5.12983, 21178486
    • Wiesner J, Vilcinskas A. Antimicrobial peptides: the ancient arm of the human immune system. Virulence 2010, 1:440-464. 10.4161/viru.1.5.12983, 21178486.
    • (2010) Virulence , vol.1 , pp. 440-464
    • Wiesner, J.1    Vilcinskas, A.2
  • 28
    • 84866366641 scopus 로고    scopus 로고
    • Adhesion/growth regulatory galectins in the human eye: localization profiles and tissue reactivities as standard to detect disease-associated alterations
    • 10.1007/s00417-012-2021-9, 22527325
    • Schloetzer-Schrehardt U, André S, Janko C, Kaltner H, Kopitz J, Gabius HJ, Herrmann M. Adhesion/growth regulatory galectins in the human eye: localization profiles and tissue reactivities as standard to detect disease-associated alterations. Graefes Arch Clin Exp Ophthalmol 2012, 250:1169-1180. 10.1007/s00417-012-2021-9, 22527325.
    • (2012) Graefes Arch Clin Exp Ophthalmol , vol.250 , pp. 1169-1180
    • Schloetzer-Schrehardt, U.1    André, S.2    Janko, C.3    Kaltner, H.4    Kopitz, J.5    Gabius, H.J.6    Herrmann, M.7
  • 29
    • 42749096587 scopus 로고    scopus 로고
    • A role for lengsin, a recruited enzyme, in terminal differentiation in the vertebrate lens
    • 10.1074/jbc.M709144200, 2911820, 18178558
    • Wyatt K, Gao C, Tsai JY, Fariss RN, Ray S, Wistow G. A role for lengsin, a recruited enzyme, in terminal differentiation in the vertebrate lens. J Biol Chem 2008, 283:6607-6615. 10.1074/jbc.M709144200, 2911820, 18178558.
    • (2008) J Biol Chem , vol.283 , pp. 6607-6615
    • Wyatt, K.1    Gao, C.2    Tsai, J.Y.3    Fariss, R.N.4    Ray, S.5    Wistow, G.6
  • 30
    • 33644803883 scopus 로고    scopus 로고
    • Opticin binds to heparan and chondroitin sulfate proteoglycans
    • 10.1167/iovs.05-0883, 16303928
    • Hindson VJ, Gallagher JT, Halfter W, Bishop PN. Opticin binds to heparan and chondroitin sulfate proteoglycans. Invest Ophthalmol Vis Sci 2005, 46:4417-4423. 10.1167/iovs.05-0883, 16303928.
    • (2005) Invest Ophthalmol Vis Sci , vol.46 , pp. 4417-4423
    • Hindson, V.J.1    Gallagher, J.T.2    Halfter, W.3    Bishop, P.N.4
  • 31
    • 0033860197 scopus 로고    scopus 로고
    • Retinoschisin, the X-linked retinoschisis protein, is a secreted photoreceptor protein, and is expressed and released by Weri-Rb1 cells
    • 10.1093/hmg/9.12.1873, 10915776
    • Grayson C, Reid SN, Ellis JA, Rutherford A, Sowden JC, Yates JR, Farber DB, Trump D. Retinoschisin, the X-linked retinoschisis protein, is a secreted photoreceptor protein, and is expressed and released by Weri-Rb1 cells. Hum Mol Genet 2000, 9:1873-1879. 10.1093/hmg/9.12.1873, 10915776.
    • (2000) Hum Mol Genet , vol.9 , pp. 1873-1879
    • Grayson, C.1    Reid, S.N.2    Ellis, J.A.3    Rutherford, A.4    Sowden, J.C.5    Yates, J.R.6    Farber, D.B.7    Trump, D.8
  • 32
    • 0347579854 scopus 로고    scopus 로고
    • Expressed sequence tag analysis of adult human lens for the NEIBank Project: over 2000 non-redundant transcripts, novel genes and splice variants
    • Wistow G, Bernstein SL, Wyatt MK, Behal A, Touchman JW, Bouffard G, Smith D, Peterson K. Expressed sequence tag analysis of adult human lens for the NEIBank Project: over 2000 non-redundant transcripts, novel genes and splice variants. Mol Vis 2002, 8:171-184.
    • (2002) Mol Vis , vol.8 , pp. 171-184
    • Wistow, G.1    Bernstein, S.L.2    Wyatt, M.K.3    Behal, A.4    Touchman, J.W.5    Bouffard, G.6    Smith, D.7    Peterson, K.8
  • 33
    • 33750141410 scopus 로고    scopus 로고
    • Secreted proteome profiling in human RPE cell cultures derived from donors with age related macular degeneration and age matched healthy donors
    • 10.1021/pr060121j, 17022631
    • An E, Lu X, Flippin J, Devaney JM, Halligan B, Hoffman EP, Strunnikova N, Csaky K, Hathout Y. Secreted proteome profiling in human RPE cell cultures derived from donors with age related macular degeneration and age matched healthy donors. J Proteome Res 2006, 5:2599-261. 10.1021/pr060121j, 17022631.
    • (2006) J Proteome Res , vol.5 , pp. 2599-3261
    • An, E.1    Lu, X.2    Flippin, J.3    Devaney, J.M.4    Halligan, B.5    Hoffman, E.P.6    Strunnikova, N.7    Csaky, K.8    Hathout, Y.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.