Binding specificity and thermodynamics of cellulose-binding modules from trichoderma reesei Cel7A and Cel6A

Biomacromolecules

Volumn 14, Issue 5, 2013, Pages 1268-1277

  Guo, Jing ^a   Catchmark, Jeffrey M ^a,b  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b The Pennsylvania State University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADSORPTION; BINDING ENERGY; CRYSTALLINE MATERIALS; DIGITAL STORAGE; ESCHERICHIA COLI; EXPERIMENTS; GLUCOSE; ISOTHERMS; OLIGOSACCHARIDES;

ACCESSIBLE SURFACE AREAS; BINDING SPECIFICITIES; CELLO-OLIGOSACCHARIDES; CELLULOSE NANOWHISKERS; ISOTHERMAL TITRATION CALORIMETRY; MICRO-CRYSTALLINE CELLULOSE; PHOSPHORIC-ACID SWOLLEN CELLULOSE; STATIC LIGHT SCATTERING;

CELLULOSE;

CELLULOSE; MICROCRYSTALLINE CELLULOSE; PHOSPHORIC ACID; FUNGAL PROTEIN; PROTEIN BINDING; RECOMBINANT PROTEIN;

ADSORPTION; ARTICLE; BINDING AFFINITY; BINDING KINETICS; BINDING SPECIFICITY; CONTROLLED STUDY; HETEROLOGOUS EXPRESSION; HYPOCREA JECORINA; ISOTHERM; ISOTHERMAL TITRATION CALORIMETRY; PRIORITY JOURNAL; THERMODYNAMICS; AMINO ACID SEQUENCE; BINDING SITE; CALORIMETRY; CHEMICAL PHENOMENA; CHEMISTRY; CLASSIFICATION; ESCHERICHIA COLI; GENETICS; KINETICS; LIGHT; MOLECULAR GENETICS; RADIATION SCATTERING; TRICHODERMA;

AMINO ACID SEQUENCE; BINDING SITES; CALORIMETRY; CELLULOSE; ESCHERICHIA COLI; FUNGAL PROTEINS; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; KINETICS; LIGHT; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; RECOMBINANT PROTEINS; SCATTERING, RADIATION; THERMODYNAMICS; TRICHODERMA;

EID: 84877736930     PISSN: 15257797     EISSN: 15264602     Source Type: Journal    
DOI: 10.1021/bm300810t     Document Type: Article

References (58)

1. Linder, M.; Lindeberg, G.; Reinikainen, T.; Teeri, T. T.; Pettersson, G. FEBS Lett. 1995, 372, 96-98
2. Stahlberg, J.; Johansson, G.; Pettersson, G. Bio/Technology 1991, 9, 286-290
3. Knowles, J.; Lehtovaara, P.; Teeri, T. Trends Biotechnol. 1987, 5, 255-261
4. Din, N.; Gilkes, N. R.; Tekant, B.; Miller, R. C.; Warren, R. A.; Kilburn, D. G. Bio/Technology 1991, 9, 1096-1099
5. Reinikainen, T.; Teleman, O.; Teeri, T. T. Proteins 1995, 22, 392-403
6. Tormo, J.; Lamed, R.; Chirino, A. J.; Morag, E.; Bayer, E. A.; Shoham, Y.; Steitz, T. A. EMBO J. 1996, 15, 5739-5751
7. Boraston, A. B.; Bolam, D. N.; Gilbert, H. J.; Davies, G. J. Biochem. J. 2004, 382, 769-782
8. Hall, M.; Bansal, P.; Lee, J. H.; Realff, M. J.; Bommarius, A. S. Bioresour. Technol. 2011, 102 (3) 2910-2915
9. Kraulis, P. J.; Clore, G. M.; Nilges, M.; Jones, T. A.; Pettersson, G.; Knowles, J.; Gronenborn, A. M. Biochemistry 1989, 28, 7241-7257
10. Xu, G. Y.; Ong, E.; Gilkes, N. R.; Kilburn, D. G.; Muhandiram, D. R.; Harris-Brandts, M.; Carver, J. P.; Kay, L. E.; Harvey, T. S. Biochemistry 1995, 34, 6993-7009
11. Din, N.; Forsythe, I. J.; Burtnick, L. J.; Gilkes, N. R.; Miller, R. C., Jr.; Warren, R. A. J.; Kilburn, D. G. Mol. Microbiol. 1994, 11, 747-755
12. Tomme, P.; Creagh, A. L.; Kilburn, D. G.; Haynes, C. A. Biochemistry 1996, 35, 13885-13894
13. Gilkes, N. R.; Jervis, E.; Henrissat, B.; Tekant, B.; Miller, R. C.; Warren, R. A.; Kilburn, D. G. Chem. Biol. Chem. 1992, 267, 6743-6749
14. StaÌŠhlberg, J.; Johansson, G.; Pettersson, G. Eur. J. Biochem. 1988, 173 (1) 179-183
15. Nieves, R. A.; Ellis, R. P.; Todd, R. J.; Johnson, T. J. A.; Grohmann, K.; Himmel, M. E. Appl. Environ. Microbiol. 1991, 57, 3136-3170
16. Gilkes, N. R.; Henrissat, B.; Kilburn, D. G.; Miller, R. C., Jr.; Warren, R. A. J. Microbiol. Rev. 1991, 55, 303-315
17. Beckham, G. T.; Matthew, J. F.; Bomble, Y. J.; Bu, L.; Adney, W. S.; Himmel, M. E.; Nimlos, M. R.; Crowley, M. F. J. Phys. Chem. B 2010, 114 (3) 1447-1453
18. Takashima, S.; Ohno, M.; Hidaka, M.; Nakamura, A.; Masaki, H.; Uozumi, T. FEBS Lett. 2007, 581 (30) 5891-5896
19. Quiocho, F. A. Annu. Rev. Biochem. 1986, 55, 287-315
20. Quiocho, F. A. Biochem. Soc. Trans. 1993, 21, 442-448
21. Vyas, N. K. Curr. Opin. Struct. Biol. 1991, 1, 732-740
22. Mohamed, N. A. M.; Watts, H. D.; Guo, J.; Catchmark, J. M.; Kubicki, J. D. Carbohydr. Res. 2010, 345 (12) 1741-1751
23. Palonen, H.; Tenkanen, M.; Linder, M. Appl. Environ. Microbiol. 1999, 65 (12) 5229-5233
24. Igarashi, K.; Uchihashi, T.; Koivula, A.; Wada, M.; Kimura, S.; Okamoto, T.; Penttilä, M.; Ando, T.; Samejima, M. Science 2011, 333 (6047) 1279-1282
25. Chanzy, H.; Henrissat, B. FEBS Lett. 1985, 184 (2) 285-288
26. Claeyssens, M.; Tomme, P.; Brewer, C. F.; Hehre, E. J. FEBS Lett. 1990, 263 (1) 89-92
27. Biely, P.; Vrsanska, M.; Claeyssens, M. TRICEL93 Symposium on Trichoderma reesei Cellulases and Other Hydrolases. In Foundation for Biotechnical and Industrial Fermentation Research; Suominen, P.; Reinikainen, T., Eds.; University of Wisconsin-Madison: Madison, Wisconsin, 1993; pp 99-108.
28. Barr, B. K.; Hsieh, Y. L.; Ganem, B.; Wilson, D. B. Biochemistry 1996, 35, 586-592
29. Teeri, T. T.; Koivula, A.; Linder, M.; Wohlfahrt, G.; Divne, C.; Jones, T. A. Biochem. Soc. Trans. 1998, 26, 173-177
30. Yui, T.; Shiiba, H.; Tsutsumi, Y.; Hayashi, S.; Miyata, T.; Hirata, F. J. Phys. Chem. B 2010, 114 (1) 49-58
31. Bu, L.; Beckham, G. T.; Crowley, M. F.; Chang, C. H.; Matthews, J. F.; Bomble, Y. J.; Adney, W. S.; Himmel, M. E.; Nimlos, M. R. J. Phys. Chem. B 2009, 113 (31) 10994-11002
32. Taylor, C. B.; Talib, M. F.; McCabe, C.; Bu, L.; Adney, W. S.; Himmel, M. E.; Crowley, M. F.; Beckham, G. T. J. Biol. Chem. 2012, 287, 3147-3155
33. Harrison, M. J.; Nouwens, A. S.; Jardine, D. R.; Zachara, N. E.; Gooley, A. A.; Nevalainen, H.; Packer, N. H. Eur. J. Biochem. 1998, 256 (1) 119-127
34. Bondeson, D.; Mathew, A.; Oksman, K. Cellulose 2006, 13, 171-180
35. Zhang, Y. H.; Cui, J.; Lynd, L. R.; Kuang, L. R. Biomacromolecules 2006, 7 (2) 644-648
36. Boraston, A. B.; Creagh, A. L.; Alam, M. M.; Kormos, J. M.; Tomme, P.; Haynes, C. A.; Warren, R. A.; Kilburn, D. G. Biochemistry 2001, 40, 6240-6247
37. Garcia, E.; Johnston, D.; Whitaker, J. R.; Shoemaker, S. P. J. Food Biochem. 1993, 17 (3) 135-145
38. Johnston, D. B.; Shoemaker, S. P.; Smith, G. M.; Whitaker, J. R. J. Food Biochem. 1998, 22 (4) 301-319
39. Brunauer, S.; Emmett, P. H.; Teller, E. J. Am. Chem. Soc. 1938, 60 (2) 309-319
40. Guo, J.; Catchmark, J. M. Carbohydr. Polym. 2012, 87 (2) 1026-1037
41. Ong, E.; Gilkes, N. R.; Miller, R. C.; Warren, R. A. J.; Kilburn, D. G. Biotechnol. Bioeng. 1993, 42 (4) 401-409
42. McLean, B. W.; Bray, M. R.; Boraston, A. B.; Gilkes, N. R.; Haynes, C. A.; Kilburn, D. G. Protein Eng. 2000, 13 (11) 801-809
43. Linder, M.; Teeri, T. T. J. Biotechnol. 1997, 57, 15-28
44. Carrard, G.; Linder, M. Eur. J. Biochem. 1999, 262, 637-643
45. Linder, M.; Salovuori, I.; Ruohonen, L.; Teeri, T. T. J. Biol. Chem. 1996, 271, 21268-21272
46. Medve, J.; Stahlberg, J.; Tjerneld, F. Appl. Biochem. Biotechnol. 1997, 66, 39-56
47. Braun, B.; Dorgan, J. R.; Chandler, J. P. Biomacromolecules 2008, 9 (4) 1255-1263
48. Mach, H.; Middaugh, C. R.; Lewis, R. V. Anal. Biochem. 1992, 200, 74-80
49. Gardner, K. H.; Blackwell, J. Biopolymers 1974, 13, 1975-2001
50. Zhang, Y. H.; Lynd, L. R. Biotechnol. Bioeng. 2004, 88 (7) 797-824
51. Reinikainen, T.; Ruohonen, L.; Nevanen, T.; Laaksonen, L.; Kraulis, P.; Jones, T. A.; Knowles, J. K. C.; Teeri, T. T. Proteins Struct., Funct., Genet. 1992, 14, 475-482
52. Proctor, M. R.; Taylor, E. J.; Nurizzo, D.; Turkenburg, J. P.; Lloyd, R. M.; Vardakou, M.; Davies, G. J.; Gilbert, H. J. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 2697-2702
53. Henshaw, J.; Horne-Bitschy, A.; Lammerts van Bueren, A.; Money, V. A.; Bolam, D. N.; Czjzek, M.; Ekborg, N. A.; Weiner, R. M.; Hutcheson, S. W.; Davies, G. J.; Boraston, A. B.; Gilbert, H. J. J. Biol. Chem. 2006, 281 (25) 17099-17107
54. Lee, I.; Evans, B. R.; Woodward, J. Ultramicroscopy 2000, 82, 213-221
55. Lehtio, J.; Sugiyama, J.; Gustavsson, M.; Fransson, L.; Linder, M.; Teeri, T. T. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 484-489
56. Matthews, J. F.; Beckham, G. T.; BergenstraÌŠhle-Wohlert, M.; Brady, J. W.; Himmel, M. E.; Crowley, M. F. J. Chem. Theory Comp. 2012, 8, 735-748
57. Notenboom, V.; Boraston, A. B.; Chiu, P.; Freelove, A.; Kilburn, D. G.; Rose, D. R. J. Mol. Biol. 2001, 314 (4) 797-806
58. Chervenak, M. C.; Toone, E. J. Biochemistry 1995, 34, 5685-5695