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Volumn 13, Issue 1, 2013, Pages

Intermolecular interactions of the malate synthase of Paracoccidioides spp

Author keywords

Malate synthase; Paracoccidioides spp; Protein protein interactions

Indexed keywords

MALATE SYNTHASE;

EID: 84877614413     PISSN: None     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-13-107     Document Type: Article
Times cited : (12)

References (70)
  • 2
    • 11144244271 scopus 로고    scopus 로고
    • Modifiable risk factors for nursing home-acquired pneumonia
    • DOI 10.1086/426023
    • Contribution to the natural history of paracocidioidomycosis: identification of primary pulmonary infection in the severe acute form of the disease-a case report. Bernard G, Kavakama J, Mendes-Giannini MJM, Kono A, Duarte AJ, Shikanai-Yasuda MA, Clin Infect Dis 2005 40 1 4 10.1086/426023 15614684 (Pubitemid 40053451)
    • (2005) Clinical Infectious Diseases , vol.40 , Issue.1 , pp. 1-6
    • Quagliarello, V.1    Ginter, S.2    Han, L.3    Van Ness, P.4    Allore, H.5    Tinetti, M.6
  • 3
    • 0036301549 scopus 로고    scopus 로고
    • Paracoccidioides brasiliensis and paracoccidioidomycosis: Molecular approaches to morphogenesis, diagnosis, epidemiology, taxonomy and genetics
    • Paracoccidioides brasiliensis and paracoccidioidomycosis: molecular approaches to morphogenesis, diagnosis, epidemiology, taxonomy and genetics. San-Blas G, Niño-Vega G, Iturriaga T, Med Mycol 2002 40 225 242 12146752 (Pubitemid 34752321)
    • (2002) Medical Mycology , vol.40 , Issue.3 , pp. 225-242
    • San-Blas, G.1    Nino-Vega, G.2    Iturriaga, T.3
  • 5
    • 67649556173 scopus 로고    scopus 로고
    • Mortality due to systemic mycoses as a primary cause of death or in association with AIDS in Brazil: A review from 1996 to 2006
    • 10.1590/S0074-02762009000300019 19547881
    • Mortality due to systemic mycoses as a primary cause of death or in association with AIDS in Brazil: a review from 1996 to 2006. Prado M, Silva MB, Laurenti R, Travassos LR, Taborda CP, Mem Inst Oswaldo Cruz 2009 104 513 521 10.1590/S0074-02762009000300019 19547881
    • (2009) Mem Inst Oswaldo Cruz , vol.104 , pp. 513-521
    • Prado, M.1    Silva, M.B.2    Laurenti, R.3    Travassos, L.R.4    Taborda, C.P.5
  • 7
    • 40649109347 scopus 로고    scopus 로고
    • Upregulation of glyoxylate cycle genes upon Paracoccidioides brasiliensis internalization by murine macrophages and in vitro nutritional stress condition
    • DOI 10.1080/13693780701670509, PII 790764883
    • Upregulation of glyoxylate cycle genes upon Paracoccidioides brasiliensis internalization by murine macrophages and in vitro nutritional stress condition. Derengowski LS, Tavares AH, Silva S, Procópio LS, Felipe MS, Silva-Pereira I, Med Mycol 2008 46 125 134 10.1080/13693780701670509 18324491 (Pubitemid 351372331)
    • (2008) Medical Mycology , vol.46 , Issue.2 , pp. 125-134
    • Derengowski, L.S.1    Tavares, A.H.2    Silva, S.3    Procopio, L.S.4    Felipe, M.S.S.5    Silva-Pereira, I.6
  • 8
    • 77957753565 scopus 로고    scopus 로고
    • The malate synthase of Paracoccidioides brasiliensis Pb01 is required in the glyoxylate cycle and in the allantoin degradation pathway
    • The malate synthase of Paracoccidioides brasiliensis Pb01 is required in the glyoxylate cycle and in the allantoin degradation pathway. Zambuzzi-Carvalho PF, Cruz AHS, Santos-Silva LK, Goes AM, Soares CMA, Pereira M, Med Mycol 2009 1 1 11
    • (2009) Med Mycol , vol.1 , pp. 1-11
    • Zambuzzi-Carvalho, P.F.1    Cruz, A.H.S.2    Santos-Silva, L.K.3    Goes, A.M.4    Soares, C.M.A.5    Pereira, M.6
  • 9
    • 77449091777 scopus 로고    scopus 로고
    • The malate synthase of Paracoccidioides brasiliensis is a linked surface protein that behaves as an anchorless adhesion
    • 10.1186/1471-2180-9-272 20034376
    • The malate synthase of Paracoccidioides brasiliensis is a linked surface protein that behaves as an anchorless adhesion. Neto BRS, Silva JF, Mendes-Giannini MJS, Lenzi HL, Soares CMA, Pereira M, BMC Microbiol 2009 9 272 284 10.1186/1471-2180-9-272 20034376
    • (2009) BMC Microbiol , vol.9 , pp. 272-284
    • Neto, B.R.S.1    Silva, J.F.2    Mendes-Giannini, M.J.S.3    Lenzi, H.L.4    Soares, C.M.A.5    Pereira, M.6
  • 10
    • 0035987407 scopus 로고    scopus 로고
    • The post-genomic era of interactive proteomics: Facts and perspectives
    • DOI 10.1002/1615-9861(200206)2:6<611::AID-PROT611>3.0.CO;2-Y
    • The post-genomic era of interactive proteomics: facts and perspectives. Auerbach D, Thaminy S, Hottiger MO, Stagljar I, Proteomics 2002 2 611 623 10.1002/1615-9861(200206)2:6<611::AID-PROT611>3.0.CO;2-Y 12112840 (Pubitemid 34693559)
    • (2002) Proteomics , vol.2 , Issue.6 , pp. 611-623
    • Auerbach, D.1    Thaminy, S.2    Hottiger, M.O.3    Stagljar, I.4
  • 11
    • 3242675407 scopus 로고    scopus 로고
    • Glutathione-S-transferase-fusion based assays for studying protein-protein interactions
    • 15064458
    • Glutathione-S-transferase-fusion based assays for studying protein-protein interactions. Vikis HG, Guan KL, Methods Mol Biol 2004 261 175 186 15064458
    • (2004) Methods Mol Biol , vol.261 , pp. 175-186
    • Vikis, H.G.1    Guan, K.L.2
  • 12
    • 82355192281 scopus 로고    scopus 로고
    • A quantitative view of the morphological phases of Paracoccidioides brasiliensis using proteomics
    • 10.1016/j.jprot.2011.08.020 21920475
    • A quantitative view of the morphological phases of Paracoccidioides brasiliensis using proteomics. Rezende TC, Borges CL, Magalhães AD, de Sousa MV, Ricart CA, Bailão AM, Soares CM, J Proteomics 2011 75 572 587 10.1016/j.jprot.2011.08.020 21920475
    • (2011) J Proteomics , vol.75 , pp. 572-587
    • Rezende, T.C.1    Borges, C.L.2    Magalhães, A.D.3    De Sousa, M.V.4    Ricart, C.A.5    Bailão, A.M.6    Soares, C.M.7
  • 13
    • 0025863508 scopus 로고
    • Molecular chaperones
    • 10.1146/annurev.bi.60.070191.001541 1679318
    • Molecular chaperones. Ellis RJ, van der Vies SM, Annu Rev Biochem 1991 60 321 347 10.1146/annurev.bi.60.070191.001541 1679318
    • (1991) Annu Rev Biochem , vol.60 , pp. 321-347
    • Ellis, R.J.1    Van Der Vies, S.M.2
  • 16
    • 84887025523 scopus 로고    scopus 로고
    • MIPS. http://mips.helmholtz-muenchen.de/genre/proj/yeast/
    • MIPS
  • 18
    • 84887022024 scopus 로고    scopus 로고
    • PEDANT 3 database. http://pedant.helmholtz-muenchen.de/index.jsp
    • PEDANT 3 Database
  • 20
    • 33644807842 scopus 로고    scopus 로고
    • Synthetic genetic array analysis in Saccharomyces cerevisiae
    • Synthetic genetic array analysis in Saccharomyces cerevisiae. Tong A, Boone C, Meth Mol Biol 2006 313 171 192
    • (2006) Meth Mol Biol , vol.313 , pp. 171-192
    • Tong, A.1    Boone, C.2
  • 26
    • 84887018084 scopus 로고    scopus 로고
    • RAMPAGE web server. http://mordred.bioc.cam.ac.uk/∼rapper/rampage.php
    • RAMPAGE Web Server
  • 30
    • 0026635155 scopus 로고
    • Malate dehydrogenase isoenzymes: Cellular locations and role in the flow of metabolites between the cytoplasm and cell organelles
    • 10.1016/0167-4838(92)90476-T 1610875
    • Malate dehydrogenase isoenzymes: cellular locations and role in the flow of metabolites between the cytoplasm and cell organelles. Gietl C, Biochim Biophys Acta 1992 1100 217 234 10.1016/0167-4838(92)90476-T 1610875
    • (1992) Biochim Biophys Acta , vol.1100 , pp. 217-234
    • Gietl, C.1
  • 31
    • 0023885305 scopus 로고    scopus 로고
    • The protein kinase family: Conserved features and deduced phylogeny of the catalytic domains
    • The protein kinase family: conserved features and deduced phylogeny of the catalytic domains. Hanks SK, Quinn AM, Hunter T, Science 1998 241 42 52
    • (1998) Science , vol.241 , pp. 42-52
    • Hanks, S.K.1    Quinn, A.M.2    Hunter, T.3
  • 32
    • 79959309143 scopus 로고    scopus 로고
    • Phosphorylation is the major mechanism regulating isocitrate lyase activity in Paracoccidioides brasiliensis yeast cells
    • 10.1111/j.1742-4658.2011.08150.x 21535474
    • Phosphorylation is the major mechanism regulating isocitrate lyase activity in Paracoccidioides brasiliensis yeast cells. Silva AH, Brock M, Zambuzzi-Carvalho PF, Santos-Silva LK, Troian RF, Góes AM, Soares CMA, Pereira M, FEBS Journal 2011 278 2318 2332 10.1111/j.1742-4658.2011.08150.x 21535474
    • (2011) FEBS Journal , vol.278 , pp. 2318-2332
    • Silva, A.H.1    Brock, M.2    Zambuzzi-Carvalho, P.F.3    Santos-Silva, L.K.4    Troian, R.F.5    Góes, A.M.6    Soares, C.M.A.7    Pereira, M.8
  • 33
    • 84857823526 scopus 로고    scopus 로고
    • Vesicle and vesicle-free extracellular proteome of Paracoccidioides brasiliensis: Comparative analysis with other pathogenic fungi
    • 10.1021/pr200872s 22288420
    • Vesicle and vesicle-free extracellular proteome of Paracoccidioides brasiliensis: Comparative analysis with other pathogenic fungi. Vallejo MC, Nakayasu ES, Matsuo AS, Sobreira TJP, Longo LVG, Ganiko L, Almeida IC, Puccia R, J Proteome Res 2012 11 1676 1685 10.1021/pr200872s 22288420
    • (2012) J Proteome Res , vol.11 , pp. 1676-1685
    • Vallejo, M.C.1    Nakayasu, E.S.2    Matsuo, A.S.3    Sobreira, T.J.P.4    Longo, L.V.G.5    Ganiko, L.6    Almeida, I.C.7    Puccia, R.8
  • 34
    • 1842633497 scopus 로고    scopus 로고
    • Development of secreted proteins as biotherapeutic agents
    • DOI 10.1517/14712598.4.4.551
    • Development of secreted proteins as biotherapeutic agents. Bonin-Debs AL, Boche I, Gille H, Brinkmann U, Expert Opin Biol Ther 2004 4 551 558 10.1517/14712598.4.4.551 15102604 (Pubitemid 38480554)
    • (2004) Expert Opinion on Biological Therapy , vol.4 , Issue.4 , pp. 551-558
    • Bonin-Debs, A.L.1    Boche, I.2    Gille, H.3    Brinkmann, U.4
  • 36
    • 84871341396 scopus 로고    scopus 로고
    • Analysis of the secretomes of Paracoccidioides mycelia and yeast cells
    • 10.1371/journal.pone.0052470 23272246
    • Analysis of the secretomes of Paracoccidioides mycelia and yeast cells. Weber SS, Parente AFA, Borges CL, Parente JA, Bailão AM, Soares CMA, PLoS ONE 2012 7 52470 10.1371/journal.pone.0052470 23272246
    • (2012) PLoS ONE , vol.7 , pp. 552470
    • Weber, S.S.1    Parente, A.F.A.2    Borges, C.L.3    Parente, J.A.4    Bailão, A.M.5    Soares, C.M.A.6
  • 37
    • 15744362283 scopus 로고    scopus 로고
    • DNA array analysis of Candida albicans gene expression in response to adherence to polystyrene
    • DOI 10.1016/j.femsle.2005.02.014
    • DNA array analysis of Candida albicans gene expression in response to adherence to polystyrene. Marchais V, Kempf M, Licznar P, Lefrançois C, Bouchara JP, Robert R, Cottin J, FEMS Microbiol 2005 245 25 32 10.1016/j.femsle.2005.02.014 (Pubitemid 40410672)
    • (2005) FEMS Microbiology Letters , vol.245 , Issue.1 , pp. 25-32
    • Marchais, V.1    Kempf, M.2    Licznar, P.3    Lefrancois, C.4    Bouchara, J.-P.5    Robert, R.6    Cottin, J.7
  • 38
    • 16244384571 scopus 로고    scopus 로고
    • Purification and partial characterization of a Paracoccidioides brasiliensis protein with capacity to bind to extracellular matrix proteins
    • DOI 10.1128/IAI.73.4.2486-2495.2005
    • Purification and partial characterization of a Paracoccidioides brasiliensis protein with capacity to bind to extracellular matrix proteins. González A, Gomez BL, Diez S, Hernandez O, Restrepo A, Hamilton AJ, Cano LE, Infect Immun 2004 73 2486 2495 (Pubitemid 40470852)
    • (2005) Infection and Immunity , vol.73 , Issue.4 , pp. 2486-2495
    • Gonzalez, A.1    Gomez, B.L.2    Diez, S.3    Hernandez, O.4    Restrepo, A.5    Hamilton, A.J.6    Cano, L.E.7
  • 39
    • 29644437769 scopus 로고    scopus 로고
    • Glyceraldehyde-3-phosphate dehydrogenase of Paracoccidioides brasiliensis is a cell surface protein involved in fungal adhesion to extracellular matrix proteins and interaction with cells
    • DOI 10.1128/IAI.74.1.382-389.2006
    • Glyceraldehyde-3-phosphate dehydrogenase of Paracoccidioides brasiliensis is a cell surface protein involved in fungal adhesion to extracellular matrix proteins and interaction with cells. Barbosa MS, Bao SN, Andreotti PF, De Faria FP, Felipe MSS, Feitosa LS, Mendes-Giannini MJS, Soares CMA, Infect Immun 2006 74 382 389 10.1128/IAI.74.1.382-389.2006 16368993 (Pubitemid 43023094)
    • (2006) Infection and Immunity , vol.74 , Issue.1 , pp. 382-389
    • Barbosa, M.S.1    Bao, S.N.2    Andreotti, P.F.3    De Faria, F.P.4    Felipe, M.S.S.5    Feitosa, L.D.S.6    Mendes-Giannini, M.J.S.7    Soares, C.M.D.A.8
  • 40
    • 4043094134 scopus 로고    scopus 로고
    • Invasion of epithelial mammalian cells by Paracoccidioides brasiliensis leads to cytoskeletal rearrangement and apoptosis of the host cell
    • DOI 10.1016/j.micinf.2004.05.005, PII S1286457904001790
    • Invasion of epithelial mammalian cells by Paracoccidioides brasiliensis leads to cytoskeletal rearrangement and apoptosis of the host cell. Mendes-Giannini MJS, Hanna SA, da Silva JL, Andretti PF, Vicentini LR, Bernard G, Lenzi HL, Soares CP, Microbes Infect 2004 6 882 891 10.1016/j.micinf.2004.05. 005 15310464 (Pubitemid 39061209)
    • (2004) Microbes and Infection , vol.6 , Issue.10 , pp. 882-891
    • Soares Mendes-Giannini, M.J.1    Hanna, S.A.2    Monteiro Da Silva, J.L.3    Andreotti, P.F.4    Vincenzi, L.R.5    Benard, G.6    Lenzi, H.L.7    Soares, C.P.8
  • 44
    • 12344271290 scopus 로고    scopus 로고
    • Real-time measurements of membrane surface dynamics on macrophages and the phagocytosis of Leishmania parasites
    • DOI 10.1016/j.yexcr.2004.09.002, PII S001448270400518X
    • Real-time measurements of membrane surface dynamics on macrophages and the phagocytosis of Leishmania parasites. Coelho Neto J, Agero U, Oliveira DC, Gazzinelli RT, Mesquita ON, Exp Cell Res 2005 303 207 217 10.1016/j.yexcr.2004. 09.002 15652336 (Pubitemid 40126256)
    • (2005) Experimental Cell Research , vol.303 , Issue.2 , pp. 207-217
    • Neto, J.C.1    Agero, U.2    Oliveira, D.C.P.3    Gazzinelli, R.T.4    Mesquita, O.N.5
  • 45
    • 84859794179 scopus 로고    scopus 로고
    • Relationship between the structure and the enzymatic activity of crotoxin complex and its phospholipase A2 subunit: An in silico approach
    • Relationship between the structure and the enzymatic activity of crotoxin complex and its phospholipase A2 subunit: An in silico approach. Pereanez JA, Gómez ID, Patino AC, J Mol Graph and Model 2012 35 36 42
    • (2012) J Mol Graph and Model , vol.35 , pp. 36-42
    • Pereanez, J.A.1    Gómez, I.D.2    Patino, A.C.3
  • 46
    • 5344234076 scopus 로고    scopus 로고
    • The ubiquitin-mediated protein degradation pathway in cancer: Therapeutic implications
    • DOI 10.1016/j.ejca.2004.07.006, PII S0959804904005660
    • The ubiquitin-mediated protein degradation pathway in cancer: therapeutic implications. Burger AM, Seth AK, Eur J Cancer 2004 40 2217 2229 10.1016/j.ejca.2004.07.006 15454246 (Pubitemid 39348871)
    • (2004) European Journal of Cancer , vol.40 , Issue.15 , pp. 2217-2229
    • Burger, A.M.1    Seth, A.K.2
  • 47
    • 27844471239 scopus 로고    scopus 로고
    • Mass spectrometry and the search for moonlighting proteins
    • DOI 10.1002/mas.20041
    • Mass spectrometry and the search for moonlighting proteins. Jeferry CJ, Mass Spectrom Rev 2005 24 772 782 10.1002/mas.20041 15605385 (Pubitemid 41641697)
    • (2005) Mass Spectrometry Reviews , vol.24 , Issue.6 , pp. 772-782
    • Jeffery, C.J.1
  • 48
    • 15944376183 scopus 로고    scopus 로고
    • The antigenic and catalytically active formamidase of Paracoccidioides brasiliensis: Protein characterization, cDNA and gene cloning, heterologous expression and functional analysis of the recombinant protein
    • DOI 10.1016/j.micinf.2004.09.011
    • The antigenic and catalytically active formamidase of Paracoccidioides brasiliensis: protein characterization, cDNA and gene cloning, heterologous expression and functional analysis of the recombinant protein. Borges CL, Pereira M, Felipe MSS, Faria FP, Gomez FJ, Deepe GS, Soares CMA, Microbes Infect 2005 7 66 77 10.1016/j.micinf.2004.09.011 15716068 (Pubitemid 40431345)
    • (2005) Microbes and Infection , vol.7 , Issue.1 , pp. 66-77
    • Borges, C.L.1    Pereira, M.2    Felipe, M.S.S.3    De Faria, F.P.4    Gomez, F.J.5    Deepe Jr., G.S.6    Soares, C.M.A.7
  • 49
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • 10.1016/0003-2697(76)90527-3 942051
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Bradford MM, Anal Biochem 1976 72 248 254 10.1016/0003-2697(76)90527-3 942051
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 51
    • 74549142895 scopus 로고    scopus 로고
    • Detection of a homotetrameric structure and protein-protein interactions of Paracoccidioides brasiliensis formamidase lead to new functional insights
    • 10.1111/j.1567-1364.2009.00594.x
    • Detection of a homotetrameric structure and protein-protein interactions of Paracoccidioides brasiliensis formamidase lead to new functional insights. Borges CL, Parente JA, Barbosa MS, Santana JM, Báo SN, Sousa MV, Soares CMA, FEMS Yeast Res 2010 10 104 113 10.1111/j.1567-1364.2009.00594.x
    • (2010) FEMS Yeast Res , vol.10 , pp. 104-113
    • Borges, C.L.1    Parente, J.A.2    Barbosa, M.S.3    Santana, J.M.4    Báo, S.N.5    Sousa, M.V.6    Soares, C.M.A.7
  • 52
    • 0037264280 scopus 로고    scopus 로고
    • Osprey: A network visualization system
    • 10.1186/gb-2003-4-3-r22
    • Osprey: a network visualization system. Breitkreutz BJ, Stark C, Tyers M, Genome Biol 2003 4 22 10.1186/gb-2003-4-3-r22
    • (2003) Genome Biol , vol.4 , pp. 22
    • Breitkreutz, B.J.1    Stark, C.2    Tyers, M.3
  • 55
    • 84859439614 scopus 로고    scopus 로고
    • Comparative transcriptome analysis of Paracoccidioides brasiliensis during in vitro adhesion to type i collagen and fibronectin: Identification of potential adhesins
    • 10.1016/j.resmic.2012.01.004 22306611
    • Comparative transcriptome analysis of Paracoccidioides brasiliensis during in vitro adhesion to type I collagen and fibronectin: identification of potential adhesins. Bailão AM, Nogueira SV, Bonfim SMRC, Castro KP, da Silva JF, Mendes-Giannini MJS, Pereira M, Soares CMA, Res Microbiol 2012 163 182 191 10.1016/j.resmic.2012.01.004 22306611
    • (2012) Res Microbiol , vol.163 , pp. 182-191
    • Bailão, A.M.1    Nogueira, S.V.2    Bonfim, S.3    Castro, K.P.4    Da Silva, J.F.5    Mendes-Giannini, M.J.S.6    Pereira, M.7    Soares, C.M.A.8
  • 56
    • 32944482167 scopus 로고    scopus 로고
    • The PbMDJ1 gene belongs to a conserved MDJ1/LON locus in thermodimorphic pathogenic fungi and encodes a heat shock protein that localizes to both the mitochondria and cell wall of Paracoccidioides brasiliensis
    • DOI 10.1128/EC.5.2.379-390.2006
    • The PbMDJ1 gene belongs to a conserved MDJ1/LON locus in thermodimorphic pathogenic fungi and encodes a heat shock protein that localizes to both the mitochondria and cell wall of Paracoccidioides brasiliensis. Batista WL, Matsuo AL, Ganiko L, Barros TF, Veiga TR, Freymüller E, Puccia R, Eukaryot Cell 2006 5 379 390 10.1128/EC.5.2.379-390.2006 16467478 (Pubitemid 43262024)
    • (2006) Eukaryotic Cell , vol.5 , Issue.2 , pp. 379-390
    • Batista, W.L.1    Matsuo, A.L.2    Ganiko, L.3    Barros, T.F.4    Veiga, T.R.5    Freymuller, E.6    Puccia, R.7
  • 57
    • 2542537092 scopus 로고    scopus 로고
    • Microscopia de Varredura Laser Confocal: Princípios e Aplicações Biomédicas
    • Microscopia de Varredura Laser Confocal: Princípios e Aplicações Biomédicas. Lenzi HL, Pelajo-Machado M, Vale BS, Panasco MS, Newslab 1996 16 62 71
    • (1996) Newslab , vol.16 , pp. 62-71
    • Lenzi, H.L.1    Pelajo-Machado, M.2    Vale, B.S.3    Panasco, M.S.4
  • 60
    • 0027180507 scopus 로고
    • Verification of protein structures: Patterns of nonbonded atomic interactions
    • Verification of protein structures: patterns of nonbonded atomic interactions. Colovos C, Yeates TO, Protein Sci 1993 2 1511 1519 10.1002/pro.5560020916 8401235 (Pubitemid 23262844)
    • (1993) Protein Science , vol.2 , Issue.9 , pp. 1511-1519
    • Colovos, C.1    Yeates, T.O.2
  • 62
    • 0026610767 scopus 로고
    • Assessment of protein models with three-dimensional profiles
    • 10.1038/356083a0 1538787
    • Assessment of protein models with three-dimensional profiles. Luthy R, Bowie JU, Eisenberg D, Nature 1992 356 83 85 10.1038/356083a0 1538787
    • (1992) Nature , vol.356 , pp. 83-85
    • Luthy, R.1    Bowie, J.U.2    Eisenberg, D.3
  • 63
    • 0020997912 scopus 로고
    • Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical feature
    • 10.1002/bip.360221211 6667333
    • Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical feature. Kabsch W, Sander C, Biopolymers 1983 22 2577 2637 10.1002/bip.360221211 6667333
    • (1983) Biopolymers , vol.22 , pp. 2577-2637
    • Kabsch, W.1    Sander, C.2
  • 64
  • 65
    • 73349093728 scopus 로고    scopus 로고
    • High-performance drug discovery: Computational screening by combining docking and molecular dynamics simulations
    • 10.1371/journal.pcbi.1000528 19816553
    • High-performance drug discovery: computational screening by combining docking and molecular dynamics simulations. Okimoto N, Futatsugi N, Fuji H, Suenaga A, Morimoto G, Yanai R, Ohno Y, Narumi T, Tai M, PLoS Comput Biol 2009 5 1000528 10.1371/journal.pcbi.1000528 19816553
    • (2009) PLoS Comput Biol , vol.5 , pp. 51000528
    • Okimoto, N.1    Futatsugi, N.2    Fuji, H.3    Suenaga, A.4    Morimoto, G.5    Yanai, R.6    Ohno, Y.7    Narumi, T.8    Tai, M.9
  • 66
    • 84887025972 scopus 로고    scopus 로고
    • Pharmacophore modeling, molecular docking, and molecular dynamics simulation approaches for identifying new lead compounds for inhibiting aldose reductase
    • Pharmacophore modeling, molecular docking, and molecular dynamics simulation approaches for identifying new lead compounds for inhibiting aldose reductase. Sakkiah S, Thangapandian S, Woo-Lee K, J Mol Model 2012 2 2249 2747
    • (2012) J Mol Model , vol.2 , pp. 2249-2747
    • Sakkiah, S.1    Thangapandian, S.2    Woo-Lee, K.3
  • 67
    • 33846823909 scopus 로고
    • Particle mesh Ewald: An N·log(N) method for Ewald sums in large systems
    • 10.1063/1.464397
    • Particle mesh Ewald: An N·log(N) method for Ewald sums in large systems. Darden T, York D, Pederson L, J Chem Phys 1993 98 10089 10092 10.1063/1.464397
    • (1993) J Chem Phys , vol.98 , pp. 10089-10092
    • Darden, T.1    York, D.2    Pederson, L.3
  • 68
    • 0029057126 scopus 로고
    • Size-independent comparison of protein three- dimensional structures
    • 10.1002/prot.340220308 7479700
    • Size-independent comparison of protein three- dimensional structures. Maiorov VN, Crippen GM, Proteins Struct Funct Genet 1995 22 273 283 10.1002/prot.340220308 7479700
    • (1995) Proteins Struct Funct Genet , vol.22 , pp. 273-283
    • Maiorov, V.N.1    Crippen, G.M.2
  • 69
    • 33747840389 scopus 로고    scopus 로고
    • GRAMM-X public web server for protein-protein docking
    • GRAMM-X public web server for protein-protein docking. Tovchigrechko A, Vakser IA, Nucleic Acids Res 2006 34 310 314
    • (2006) Nucleic Acids Res , vol.34 , pp. 310-314
    • Tovchigrechko, A.1    Vakser, I.A.2
  • 70
    • 77951232176 scopus 로고    scopus 로고
    • FiberDock: Flexible induced-fit backbone refinement in molecular docking
    • FiberDock: flexible induced-fit backbone refinement in molecular docking. Mashiach E, Nussinov R, Wolfson HJ, Proteins 2009 78 1503 1519
    • (2009) Proteins , vol.78 , pp. 1503-1519
    • Mashiach, E.1    Nussinov, R.2    Wolfson, H.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.