Proteomic analyses and identification of arginine methylated proteins differentially recognized by autosera from anti-Sm positive SLE patients

Journal of Biomedical Science

Volumn 20, Issue 1, 2013, Pages

  Chang, Hong How ^a   Hu, Huan Hsuan ^a   Lee, Yu Jen ^a   Wei, Hung Ming ^a   Fan June, Ming Chun ^a   Hsu, Tsai Ching ^a   Tsay, Gregory J ^a,b   Li, Chuan ^a,b  

^a CHUNG SHAN MEDICAL UNIVERSITY   (Taiwan)

^b CHUNG SHAN MEDICAL UNIVERSITY HOSPITAL   (Taiwan)

Author keywords

Anti Sm; Arginine methylation; CNBP; hnRNP DL; SLE

Indexed keywords

ARGININE; CELLULAR NUCLEIC ACID BINDING PROTEIN; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D LIKE PROTEIN; PROTEIN; SM ANTIBODY; SPLICING FACTOR PROLINE AND GLUTAMINE RICH PROTEIN; UNCLASSIFIED DRUG; AUTOANTIBODY; CNBP PROTEIN, HUMAN; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D; HNRNP D0; PTB-ASSOCIATED SPLICING FACTOR; RNA BINDING PROTEIN; PTB ASSOCIATED SPLICING FACTOR;

ANTIBODY BLOOD LEVEL; ARTICLE; CONTROLLED STUDY; ESCHERICHIA COLI; FEMALE; HUMAN; HUMAN CELL; IMMUNOBLOTTING; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEIN METHYLATION; PROTEIN PURIFICATION; PROTEOMICS; SYSTEMIC LUPUS ERYTHEMATOSUS; TWO DIMENSIONAL GEL ELECTROPHORESIS; BLOOD; GENETIC TRANSFECTION; HELA CELL LINE; IMMUNOLOGY; METABOLISM; METHYLATION; HELA CELL;

ESCHERICHIA COLI;

ARGININE; AUTOANTIBODIES; HELA CELLS; HETEROGENEOUS-NUCLEAR RIBONUCLEOPROTEIN D; HUMANS; LUPUS ERYTHEMATOSUS, SYSTEMIC; METHYLATION; PROTEOMICS; RNA-BINDING PROTEINS; TRANSFECTION;

EID: 84876965355     PISSN: 10217770     EISSN: 14230127     Source Type: Journal    
DOI: 10.1186/1423-0127-20-27     Document Type: Article

References (29)

1. Molecular mechanisms of autoimmunity. Atassi MZ, Casali P, Autoimmunity 2008 41 123 132 10.1080/08916930801929021 18324481 (Pubitemid 351372294)
2. Post-translational modifications of self antigens: implications for autoimmunity. Anderton SM, Curr Opin Immunol 2004 16 753 758 10.1016/j.coi.2004.09.001 15511669 (Pubitemid 39423665)
3. Posttranslational modifications of self-antigens. Doyle HA, Mamula MJ, Ann N Y Acad Sci 2005 1050 1 9 10.1196/annals.1313.001 16231439 (Pubitemid 41129418)
4. Autoantigenesis: the evolution of protein modifications in autoimmune disease. Doyle HA, Mamula MJ, Curr Opin Immunol 2012 24 112 118 10.1016/j.coi.2011.12.003 22209691
5. Protein arginine methylation in mammals: who, what, and Why. Bedford MT, Clarke SG, Mol Cell 2009 33 1 13 10.1016/j.molcel.2008.12.013 19150423
6. Evolutionarily conserved protein arginine methyltransferases in non-mammalian animal systems. Wang Y-C, Li C, FEBS J 2012 279 932 945 10.1111/j.1742-4658.2012.08490.x 22251447
7. Specific enzymic methylation of an arginine in the experimental allergic encephalomyelitis protein from human myelin. Baldwin GS, Carnegie PR, Science 1971 171 579 581 10.1126/science.171.3971.579 4924231
8. The C-terminal RG dipeptide repeats of the spliceosomal Sm proteins D1 and D3 contain symmetrical dimethylarginines, which form a major B-cell epitope for anti-Sm autoantibodies. Brahms H, Raymackers J, Union A, de Keyser F, Meheus L, Luhrmann R, J Biol Chem 2000 275 17122 17129 10.1074/jbc.M000300200 10747894 (Pubitemid 30398957)
9. Symmetrical dimethylation of arginine residues in spliceosomal Sm protein B/B′ and the Sm-like protein LSm4, and their interaction with the SMN protein. Brahms H, Meheus L, de Brabandere V, Fischer U, Luhrmann R, RNA 2001 7 1531 1542 10.1017/S135583820101442X 11720283 (Pubitemid 33078929)
10. Purification and partial characterization of a nucleolar scleroderma antigen (Mr = 34,000; pI, 8.5) rich in NG, NG-dimethylarginine. Lischwe MA, Ochs RL, Reddy R, Cook RG, Yeoman LC, Tan EM, Reichlin M, Busch H, J Biol Chem 1985 260 14304 14310 2414294 (Pubitemid 16197504)
11. Enzymatic methylation of recombinant heterogeneous nuclear RNP protein A1. Dual substrate specificity for S-adenosylmethionine:histone-arginine N-methyltransferase. Rajpurohit R, Lee SO, Park JO, Paik WK, Kim S, J Biol Chem 1994 269 1075 1082 8288564
12. Modifications of arginines and their role in autoimmunity. van Boekel MAM, van Venrooij WJ, Autoimmun Rev 2003 2 57 62 10.1016/S1568-9972(02)00128-3 12848959 (Pubitemid 37443855)
13. A post-translational modification of nuclear proteins, N(G), N(G)-dimethyl-Arg, found in a natural HLA class I peptide ligand. Yague J, Vazquez J, Lopez de Castro JA, Protein Sci 2000 9 2210 2217 10.1110/ps.9.11.2210 11152131 (Pubitemid 32104157)
14. Anti-Sm and anti-RNP antibodies. Migliorini P, Baldini C, Rocchi V, Bombardieri S, Autoimmunity 2005 38 47 54 10.1080/08916930400022715 15804705 (Pubitemid 40515003)
15. The 1982 revised criteria for the classification of systemic lupus erythematosus. Tan EM, Cohen AS, Fries JF, Masi AT, McShane DJ, Rothfield NF, Schaller JG, Talal N, Winchester RJ, Arthritis Rheum 1982 25 1271 1277 10.1002/art.1780251101 7138600 (Pubitemid 13221242)
16. Effects of adenosine dialdehyde treatment on in vitro and in vivo stable protein methylation in HeLa cells. Chen DH, Wu KT, Hung CJ, Hsieh M, Li C, J Biochem 2004 136 371 376 10.1093/jb/mvh131 15598895 (Pubitemid 39545798)
17. Proteomic analysis of methylarginine-containing proteins in HeLa cells by two-dimensional gel electrophoresis and immunoblotting with a methylarginine-specific antibody. Hung CJ, Lee YJ, Chen DH, Li C, Protein J 2009 28 139 147 10.1007/s10930-009-9174-3 19365714
18. Protein arginine methylation of SERBP1 by protein arginine methyltransferase 1 affects cytoplasmic/nuclear distribution. Lee YJ, Hsieh WY, Chen LY, Li C, J Cell Biochem 2012 113 2721 2728 10.1002/jcb.24151 22442049
19. Identifying and quantifying in vivo methylation sites by heavy methyl SILAC. Ong S-E, Mittler G, Mann M, Nature Methods 2004 1 119 126 10.1038/nmeth715 15782174
20. A method for large-scale identification of protein arginine methylation. Uhlmann T, Geoghegan VL, Thomas B, Ridlova G, Trudgian DC, Acuto O, Mol Cell Proteomics 2012 11 1489 1499 10.1074/mcp.M112.020743 22865923
21. Identification of the nucleocytoplasmic shuttling sequence of heterogeneous nuclear ribonucleoprotein D-like protein JKTBP and its interaction with mRNA. Kawamura H, Tomozoe Y, Akagi T, Kamei D, Ochiai M, Yamada M, J Biol Chem 2002 277 2732 2739 10.1074/jbc.M108477200 11705999 (Pubitemid 34953302)
22. Autoantibodies to heterogeneous nuclear ribonucleoproteins. Caporali R, Bugatti S, Bruschi E, Cavagna L, Montecucco C, Autoimmunity 2005 38 25 32 10.1080/08916930400022590 15804702 (Pubitemid 40515000)
23. AUF1, the regulator of tumor necrosis factor alpha messenger RNA decay, is targeted by autoantibodies of patients with systemic rheumatic diseases. Skriner K, Hueber W, Suleymanoglu E, Hofler E, Krenn V, Smolen J, Steiner G, Arthritis Rheum 2008 58 511 520 10.1002/art.23306 18240226 (Pubitemid 351294885)
24. A proteomic analysis of arginine-methylated protein complexes. Boisvert FM, Cote J, Boulanger MC, Richard S, Mol Cell Proteomics 2003 2 1319 1330 10.1074/mcp.M300088-MCP200 14534352
25. In vivo and in vitro arginine methylation of RNA-binding proteins. Liu Q, Dreyfuss G, Mol Cell Biol 1995 15 2800 2808 7739561
26. Alpha-enolase: a target of antibodies in infectious and autoimmune diseases. Terrier B, Degand N, Guilpain P, Servettaz A, Guillevin L, Mouthon L, Autoimmun Rev 2007 6 176 182 10.1016/j.autrev.2006.10.004 17289554 (Pubitemid 46201958)
27. SR proteins are autoantigens in patients with systemic lupus erythematosus. Importance of phosphoepitopes. Neugebauer KM, Merrill JT, Wener MH, Lahita RG, Roth MB, Arthritis Rheum 2000 43 1768 1778 10.1002/1529- 0131(200008)43:8<1768::AID-ANR13>3.0.CO;2-9 10943867
28. Myotonic dystrophy type 2 caused by a CCTG expansion in intron 1 of ZNF9. Liquori CL, Ricker K, Moseley ML, Jacobsen JF, Kress W, Naylor SL, Day JW, Ranum LP, Science 2001 293 864 867 10.1126/science.1062125 11486088 (Pubitemid 32743976)
29. La protein is associated with terminal oligopyrimidine mRNAs in actively translating polysomes. Cardinali B, Carissimi C, Gravina P, Pierandrei-Amaldi P, J Biol Chem 2003 278 35145 35151 10.1074/jbc.M300722200 12840030 (Pubitemid 37102278)